Works matching DE "EXORIBONUCLEASES"

Results: 74

Dxo1 is a new type of eukaryotic enzyme with both decapping and 5?-3? exoribonuclease activity.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 10, p. 1011, doi. 10.1038/nsmb.2381

By:

Chang, Jeong Ho;
Jiao, Xinfu;
Chiba, Kunitoshi;
Oh, ChanSeok;
Martin, Charles E;
Kiledjian, Megerditch;
Tong, Liang

Publication type:

Article

Viral evolution: Fooling the coronavirus proofreading machinery.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 10, p. 662, doi. 10.1038/nrmicro3125

By:

Hofer, Ursula

Publication type:

Article

The 5′-3′ Exoribonuclease XRN4 Regulates Auxin Response via the Degradation of Auxin Receptor Transcripts.

Published in:

Genes, 2018, v. 9, n. 12, p. 638, doi. 10.3390/genes9120638

By:

Windels, David;
Bucher, Etienne

Publication type:

Article

An end in sight? Xrn2 and transcriptional termination by RNA polymerase II.

Published in:

Transcription (2154-1264), 2018, v. 9, n. 5, p. 321, doi. 10.1080/21541264.2018.1498708

By:

Eaton, Joshua D.;
West, Steven

Publication type:

Article

2'-O-methylation of the mRNA cap protects RNAs from decapping and degradation by DXO.

Published in:

PLoS ONE, 2018, v. 13, n. 3, p. 1, doi. 10.1371/journal.pone.0193804

By:

Picard-Jean, Frédéric;
Brand, Carolin;
Tremblay-Létourneau, Maude;
Allaire, Andréa;
Beaudoin, Maxime C.;
Boudreault, Simon;
Duval, Cyntia;
Rainville-Sirois, Julien;
Robert, Francis;
Pelletier, Jerry;
Geiss, Brian J.;
Bisaillon, Martin

Publication type:

Article

XRN1 Stalling in the 5’ UTR of Hepatitis C Virus and Bovine Viral Diarrhea Virus Is Associated with Dysregulated Host mRNA Stability.

Published in:

PLoS Pathogens, 2015, v. 11, n. 3, p. 1, doi. 10.1371/journal.ppat.1004708

By:

Moon, Stephanie L.;
Blackinton, Jeffrey G.;
Anderson, John R.;
Dozier, Mary K.;
Dodd, Benjamin J. T.;
Keene, Jack D.;
Wilusz, Carol J.;
Bradrick, Shelton S.;
Wilusz, Jeffrey

Publication type:

Article

Correction: Coronaviruses Lacking Exoribonuclease Activity Are Susceptible to Lethal Mutagenesis: Evidence for Proofreading and Potential Therapeutics.

Published in:: 2014
Publication type:: Correction Notice

Coronaviruses as DNA Wannabes: A New Model for the Regulation of RNA Virus Replication Fidelity.

Published in:

PLoS Pathogens, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.ppat.1003760

By:

Smith, Everett Clinton;
Denison, Mark R.

Publication type:

Article

Coronaviruses Lacking Exoribonuclease Activity Are Susceptible to Lethal Mutagenesis: Evidence for Proofreading and Potential Therapeutics.

Published in:

PLoS Pathogens, 2013, v. 9, n. 8, p. 1, doi. 10.1371/journal.ppat.1003565

By:

Smith, Everett Clinton;
Blanc, Hervé;
Vignuzzi, Marco;
Denison, Mark R.

Publication type:

Article

The Footprint of Genome Architecture in the Largest Genome Expansion in RNA Viruses.

Published in:

PLoS Pathogens, 2013, v. 9, n. 7, p. 1, doi. 10.1371/journal.ppat.1003500

By:

Lauber, Chris;
Goeman, Jelle J.;
Parquet, Maria del Carmen;
Thi Nga, Phan;
Snijder, Eric J.;
Morita, Kouichi;
Gorbalenya, Alexander E.

Publication type:

Article

Structural characterization of NrnC identifies unifying features of dinucleotidases.

Published in:

eLife, 2021, p. 1, doi. 10.7554/eLife.70146

By:

Lormand, Justin D.;
Soo-Kyoung Kim;
Walters-Marrah, George A.;
Brownfield, Bryce A.;
Fromme, J. Christopher;
Winkler, Wade C.;
Goodson, Jonathan R.;
Lee, Vincent T.;
Sondermann, Holger

Publication type:

Article

Novel mRNA-silencing bodies at the synapse: A never-ending story.

Published in:

Communicative & Integrative Biology, 2016, v. 9, n. 2, p. 1, doi. 10.1080/19420889.2016.1139251

By:

Thomas, María Gabriela;
Boccaccio, Graciela Lidia

Publication type:

Article

Evolutionarily Conserved 5’-3’ Exoribonuclease Xrn1 Accumulates at Plasma Membrane-Associated Eisosomes in Post-Diauxic Yeast.

Published in:

PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0122770

By:

Grousl, Tomas;
Opekarová, Miroslava;
Stradalova, Vendula;
Hasek, Jiri;
Malinsky, Jan

Publication type:

Article

The Exosome Cofactor Rrp47 Is Critical for the Stability and Normal Expression of Its Associated Exoribonuclease Rrp6 in Saccharomyces cerevisiae.

Published in:

PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0080752

By:

Feigenbutz, Monika;
Garland, William;
Turner, Martin;
Mitchell, Phil

Publication type:

Article

Alterations of the Transcriptome of Sulfolobus acidocaldarius by Exoribonuclease aCPSF2.

Published in:

PLoS ONE, 2013, v. 8, n. 10, p. 1, doi. 10.1371/journal.pone.0076569

By:

Märtens, Birgit;
Amman, Fabian;
Manoharadas, Salim;
Zeichen, Lukas;
Orell, Alvaro;
Albers, Sonja-Verena;
Hofacker, Ivo;
Bläsi, Udo

Publication type:

Article

Identification of Genes Potentially Regulated by Human Polynucleotide Phosphorylase (hPNPaseold-35) Using Melanoma as a Model.

Published in:

PLoS ONE, 2013, v. 8, n. 10, p. 1, doi. 10.1371/journal.pone.0076284

By:

Sokhi, Upneet K.;
Bacolod, Manny D.;
Dasgupta, Santanu;
Emdad, Luni;
Das, Swadesh K.;
Dumur, Catherine I.;
Miles, Michael F.;
Sarkar, Devanand;
Fisher, Paul B.

Publication type:

Article

Small RNA Modules Confer Different Stabilities and Interact Differently with Multiple Targets.

Published in:

PLoS ONE, 2013, v. 8, n. 1, p. 1, doi. 10.1371/journal.pone.0052866

By:

Marques Andrade, José;
Pobre, Vânia;
Arraiano, Cecília Maria

Publication type:

Article

An Integrated In Silico Approach to Design Specific Inhibitors Targeting Human Poly(A)-Specific Ribonuclease.

Published in:

PLoS ONE, 2012, v. 7, n. 12, p. 1, doi. 10.1371/journal.pone.0051113

By:

Vlachakis, Dimitrios;
Pavlopoulou, Athanasia;
Tsiliki, Georgia;
Komiotis, Dimitri;
Stathopoulos, Constantinos;
A. A. Balatsos, Nikolaos;
Kossida, Sophia

Publication type:

Article

mRNA Decay Proteins Are Targeted to poly(A)+ RNA and dsRNA-Containing Cytoplasmic Foci That Resemble P-Bodies in Entamoeba histolytica.

Published in:

PLoS ONE, 2012, v. 7, n. 9, p. 1, doi. 10.1371/journal.pone.0045966

By:

López-Rosas, Itzel;
Orozco, Esther;
Marchat, Laurence A.;
García-Rivera, Guillermina;
Guillen, Nancy;
Weber, Christian;
Carrillo-Tapia, Eduardo;
Dez de la Cruz, Olga Hernán;
Pérez-Plasencia, Carlos;
López-Camarillo, César;
Stoecklin, Georg

Publication type:

Article

Additive and Transcript-Specific Effects of KPAP1 and TbRND Activities on 39 Non-Encoded Tail Characteristics and mRNA Stability in Trypanosoma brucei.

Published in:

PLoS ONE, 2012, v. 7, n. 5, p. 1, doi. 10.1371/journal.pone.0037639

By:

Zimmer, Sara L.;
McEvoy, Sarah M.;
Menon, Sarita;
Read, Laurie K.

Publication type:

Article

NF-?B-repressing factor phosphorylation regulates transcription elongation via its interactions with 5'?3' exoribonuclease 2 and negative elongation factor.

Published in:

FASEB Journal, 2016, v. 30, n. 1, p. 174, doi. 10.1096/fj.15-270256

By:

Rother, Sascha;
Bartels, Myriam;
Schweda, Aike Torben;
Resch, Klaus;
Pallua, Norbert;
Nourbakhsh, Mahtab

Publication type:

Article

Loss of Arabidopsis 5'-3' Exoribonuclease AtXRN4 Function Enhances Heat Stress Tolerance of Plants Subjected to Severe Heat Stress.

Published in:

Plant & Cell Physiology, 2015, v. 56, n. 9, p. 1762, doi. 10.1093/pcp/pcv096

By:

Anh Hai Nguyen;
Akihiro Matsui;
Maho Tanaka;
Kayoko Mizunashi;
Kentaro Nakaminami;
Makoto Hayashi;
Kei Iida;
Tetsuro Toyoda;
Nguyen, Dong Van;
Motoaki Seki

Publication type:

Article

Loss of XRN4 Function Can Trigger Cosuppression in a Sequence-Dependent Manner.

Published in:

Plant & Cell Physiology, 2012, v. 53, n. 7, p. 1310, doi. 10.1093/pcp/pcs078

By:

Hayashi, Makoto;
Nanba, Chieko;
Saito, Miyuki;
Kondo, Maki;
Takeda, Atsushi;
Watanabe, Yuichiro;
Nishimura, Mikio

Publication type:

Article

RNase J1 and J2 Are Host-Encoded Factors for Plasmid Replication.

Published in:

Frontiers in Microbiology, 2021, v. 11, p. N.PAG, doi. 10.3389/fmicb.2021.586886

By:

Guimarães, Vanessa Andrade;
Le Scornet, Alexandre;
Khemici, Vanessa;
Hausmann, Stéphane;
Armitano, Joshua;
Prados, Julien;
Jousselin, Ambre;
Manzano, Caroline;
Linder, Patrick;
Redder, Peter

Publication type:

Article

The exoribonuclease Polynucleotide Phosphorylase influences the virulence and stress responses of yersiniae and many other pathogens.

Published in:

Frontiers in Cellular & Infection Microbiology, 2013, v. 3, p. 1, doi. 10.3389/fcimb.2013.00081

By:

Rosenzweig, Jason A.;
Chopra, Ashok K.

Publication type:

Article

Exoribonucleases as modulators of virulence in pathogenic bacteria.

Published in:

Frontiers in Cellular & Infection Microbiology, 2012, v. 2, p. 1, doi. 10.3389/fcimb.2012.00065

By:

Matos, Rute G.;
Bárria, Cátia;
Pobre, Vânia;
Andrade, José M.;
Arraiano, Cecília M.

Publication type:

Article

Caught in the act: RNA- Seq provides novel insights into mRNA degradation.

Published in:

Molecular Microbiology, 2014, v. 94, n. 1, p. 5, doi. 10.1111/mmi.12769

By:

Gerwig, Jan;
Stülke, Jörg

Publication type:

Article

RNA degradation in Bacillus subtilis: an interplay of essential endo- and exoribonucleases.

Published in:

Molecular Microbiology, 2012, v. 84, n. 6, p. 1005, doi. 10.1111/j.1365-2958.2012.08072.x

By:

Lehnik-Habrink, Martin;
Lewis, Richard J.;
Mäder, Ulrike;
Stülke, Jörg

Publication type:

Article

XRN2 Autoregulation and Control of Polycistronic Gene Expresssion in Caenorhabditis elegans.

Published in:

PLoS Genetics, 2016, v. 12, n. 9, p. 1, doi. 10.1371/journal.pgen.1006313

By:

Miki, Takashi S.;
Carl, Sarah H.;
Stadler, Michael B.;
Großhans, Helge

Publication type:

Article

XRN2 Links Transcription Termination to DNA Damage and Replication Stress.

Published in:

PLoS Genetics, 2016, v. 12, n. 7, p. 1, doi. 10.1371/journal.pgen.1006107

By:

Morales, Julio C.;
Richard, Patricia;
Patidar, Praveen L.;
Motea, Edward A.;
Dang, Tuyen T.;
Manley, James L.;
Boothman, David A.

Publication type:

Article

Potyviral VPg and HC-Pro Proteins and the Cellular Translation Initiation Factor eIF(iso)4E Interact with Exoribonuclease Rrp6 and a Small α-Heat Shock Protein.

Published in:

Plant Molecular Biology Reporter, 2014, v. 32, n. 2, p. 596, doi. 10.1007/s11105-013-0670-4

By:

Freire, Miguel

Publication type:

Article

Molecular Cloning and Expression Analysis of a Putative 5′-3′ EXORIBONUCLEASE4 (XRN4) Gene from Tomato.

Published in:

Plant Molecular Biology Reporter, 2012, v. 30, n. 6, p. 1348, doi. 10.1007/s11105-012-0449-z

By:

Yang, Yingwu;
Xian, Zhiqiang;
Wu, Yu;
Li, Ji;
Deng, Wei

Publication type:

Article

Insight into the RNA Exosome Complex Through Modeling Pontocerebellar Hypoplasia Type 1b Disease Mutations in Yeast.

Published in:

Genetics, 2017, v. 205, n. 1, p. 221, doi. 10.1534/genetics.116.195917

By:

Fasken, Milo B.;
Losh, Jillian S.;
Leung, Sara W.;
Brutus, Sergine;
Avin, Brittany;
Vaught, Jillian C.;
Potter-Birriel, Jennifer;
Craig, Taylor;
Conn, Graeme L.;
Mills-Lujan, Katherine;
Corbett, Anita H.;
van Hoof, Ambro

Publication type:

Article

The exosome controls alternative splicing by mediating the gene expression and assembly of the spliceosome complex.

Published in:

Scientific Reports, 2015, p. 13403, doi. 10.1038/srep13403

By:

Zhang, Lin;
Wan, Yufeng;
Huang, Guobin;
Wang, Dongni;
Yu, Xinyang;
Huang, Guocun;
Guo, Jinhu

Publication type:

Article

Mechanism and structural diversity of exoribonuclease-resistant RNA structures in flaviviral RNAs.

Published in:

Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-017-02604-y

By:

MacFadden, Andrea;
O'Donoghue, Zoe;
Chapman, Erich G.;
Kieft, Jeffrey S.;
Silva, Patricia A. G. C.;
Bredenbeek, Peter J.;
Olsthoorn, René C.;
Pijlman, Gorben P.;
Sterken, Mark G.

Publication type:

Article

RNA degradation by the plant RNA exosome involves both phosphorolytic and hydrolytic activities.

Published in:

Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-02066-2

By:

Sikorska, Natalia;
Zuber, Hélène;
Gobert, Anthony;
Lange, Heike;
Gagliardi, Dominique

Publication type:

Article

Reserpine requires the D2-type receptor, dop-3, and the exoribonuclease, eri-1, to extend the lifespan in C. elegans.

Published in:

Journal of Biosciences, 2016, v. 41, n. 4, p. 689, doi. 10.1007/s12038-016-9652-7

By:

Saharia, Kopal;
Kumar, Ranjeet;
Gupta, Kuldeep;
Mishra, Shrilekha;
Subramaniam, Jamuna

Publication type:

Article

A planarian nidovirus expands the limits of RNA genome size.

Published in:

PLoS Pathogens, 2018, v. 14, n. 11, p. 1, doi. 10.1371/journal.ppat.1007314

By:

Saberi, Amir;
Gulyaeva, Anastasia A.;
Brubacher, John L.;
Newmark, Phillip A.;
Gorbalenya, Alexander E.

Publication type:

Article

The ApaH-like phosphatase TbALPH1 is the major mRNA decapping enzyme of trypanosomes.

Published in:

PLoS Pathogens, 2017, v. 13, n. 6, p. 1, doi. 10.1371/journal.ppat.1006456

By:

Kramer, Susanne

Publication type:

Article

The Evolutionarily Conserved Protein LAS1 Is Required for Pre-rRNA Processing at Both Ends of ITS2.

Published in:

Molecular & Cellular Biology, 2012, v. 32, n. 2, p. 14, doi. 10.1128/MCB.06019-11

By:

Schillewaert, Stéphanie;
Wacheul, Ludivine;
Lhomme, Frédéric;
Lafontaine, Denis L. J.

Publication type:

Article

An African tick flavivirus forming an independent clade exhibits unique exoribonuclease-resistant RNA structures in the genomic 3′-untranslated region.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-84365-9

By:

Harima, Hayato;
Orba, Yasuko;
Torii, Shiho;
Qiu, Yongjin;
Kajihara, Masahiro;
Eto, Yoshiki;
Matsuta, Naoya;
Hang'ombe, Bernard M.;
Eshita, Yuki;
Uemura, Kentaro;
Matsuno, Keita;
Sasaki, Michihito;
Yoshii, Kentaro;
Nakao, Ryo;
Hall, William W.;
Takada, Ayato;
Abe, Takashi;
Wolfinger, Michael T.;
Simuunza, Martin;
Sawa, Hirofumi

Publication type:

Article

The 3' to 5' Exoribonuclease DIS3: From Structure and Mechanisms to Biological Functions and Role in Human Disease.

Published in:

Biomolecules (2218-273X), 2015, v. 5, n. 3, p. 1515, doi. 10.3390/biom5031515

By:

Robinson, Sophie R.;
Oliver, Antony W.;
Chevassut, Timothy J.;
Newbury, Sarah F.

Publication type:

Article

The 3′UTR‐derived sRNA RsaG coordinates redox homeostasis and metabolism adaptation in response to glucose‐6‐phosphate uptake in Staphylococcus aureus.

Published in:

Molecular Microbiology, 2022, v. 117, n. 1, p. 193, doi. 10.1111/mmi.14845

By:

Desgranges, Emma;
Barrientos, Laura;
Herrgott, Lucas;
Marzi, Stefano;
Toledo‐Arana, Alejandro;
Moreau, Karen;
Vandenesch, François;
Romby, Pascale;
Caldelari, Isabelle

Publication type:

Article

Issue Information.

Published in:: FEBS Open Bio, 2023, v. 13, n. 6, p. 951, doi. 10.1002/2211-5463.13429
Publication type:: Article

How hydrolytic exoribonucleases impact human disease: Two sides of the same story.

Published in:

FEBS Open Bio, 2023, v. 13, n. 6, p. 957, doi. 10.1002/2211-5463.13392

By:

Costa, Susana M.;
Saramago, Margarida;
Matos, Rute G.;
Arraiano, Cecília M.;
Viegas, Sandra C.

Publication type:

Article

Next generation sequencing analysis reveals that the ribonucleases RNase II, RNase R and PNPase affect bacterial motility and biofilm formation in E. coli.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1237-6

By:

Pobre, Vânia;
Arraiano, Cecília M.

Publication type:

Article

The Escherichia coli major exoribonuclease RNase II is a component of the RNA degradosome.

Published in:

Bioscience Reports, 2014, v. 34, n. 6, p. 879, doi. 10.1042/BSR20140113

By:

Feng Lu;
Taghbalout, Aziz

Publication type:

Article

Novel interaction of two clock-relevant RNA-binding proteins C3 and XRN1 in Chlamydomonas reinhardtii

Published in:

FEBS Letters, 2012, v. 586, n. 22, p. 3969, doi. 10.1016/j.febslet.2012.09.046

By:

Dathe, Hannes;
Prager, Katja;
Mittag, Maria

Publication type:

Article

Inhibition of RNA degradation integrates the metabolic signals induced by osmotic stress into the Arabidopsis circadian system.

Published in:

Journal of Experimental Botany, 2023, v. 74, n. 18, p. 5805, doi. 10.1093/jxb/erad274

By:

Prasetyaningrum, Putri;
Litthauer, Suzanne;
Vegliani, Franco;
Battle, Martin William;
Wood, Matthew William;
Liu, Xinmeng;
Dickson, Cathryn;
Jones, Matthew Alan

Publication type:

Article

Beet Necrotic Yellow Vein Virus Noncoding RNA Production Depends on a 5'→3' Xrn Exoribonuclease Activity.

Published in:

Viruses (1999-4915), 2018, v. 10, n. 3, p. 137, doi. 10.3390/v10030137

By:

Flobinus, Alyssa;
Chevigny, Nicolas;
Charley, Phillida A.;
Seissler, Tanja;
Klein, Elodie;
Bleykasten-Grosshans, Claudine;
Ratti, Claudio;
Bouzoubaa, Salah;
Wilusz, Jeffrey;
Gilmer, David

Publication type:

Article