Works matching DE "EUROPEAN Bioinformatics Institute"

Results: 70

Effects of miR-150-5p on the growth and SOCS1 expression of rheumatoid arthritis synovial fibroblasts.

Published in:

Clinical Rheumatology, 2020, v. 39, n. 3, p. 909, doi. 10.1007/s10067-019-04894-7

By:

Qiu, Mingliang;
Mo, Lisha;
Li, Juxiang;
Liang, Hua;
Zhu, Weina;
Zheng, Xiangjuan;
Duan, Xinwang;
Xu, Weidong

Publication type:

Article

Characterization of the rumen microbiome of Indian Kankrej cattle ( Bos indicus) adapted to different forage diet.

Published in:

Applied Microbiology & Biotechnology, 2014, v. 98, n. 23, p. 9749, doi. 10.1007/s00253-014-6153-1

By:

Patel, Vilas;
Patel, Amrutlal;
Parmar, Nidhi;
Patel, Anand;
Reddy, Bhaskar;
Joshi, Chaitanya

Publication type:

Article

Causal effects of 731 immune cell phenotypes on autism spectrum disorder: a Mendelian randomization study.

Published in:

Frontiers in Psychiatry, 2024, p. 1, doi. 10.3389/fpsyt.2024.1397006

By:

Yunfeng Yu;
Xinyu Yang;
Gang Hu;
Yuman Yin;
Rong Yu

Publication type:

Article

Bidirectional two-sample Mendelian randomization analysis reveals a causal effect of interleukin-18 levels on postherpetic neuralgia risk.

Published in:

Frontiers in Immunology, 2023, p. 1, doi. 10.3389/fimmu.2023.1183378

By:

Xiao Liang;
Yuchao Fan

Publication type:

Article

A novel liver zonation phenotype-associated molecular classification of hepatocellular carcinoma.

Published in:

Frontiers in Immunology, 2023, v. 14, p. 1, doi. 10.3389/fimmu.2023.1140201

By:

Tao Zhang;
Jian Gu;
Xinyi Wang;
Yaoyao Lu;
Cai, Kailin;
Huili Li;
Yingli Nie;
Xiangdong Chen;
Jiliang Wang

Publication type:

Article

Feature genes predicting the FLT3/ITD mutation in acute myeloid leukemia.

Published in:

Molecular Medicine Reports, 2016, v. 14, n. 1, p. 89, doi. 10.3892/mmr.2016.5260

By:

CHENGLONG LI;
BIAO ZHU;
JIAO CHEN;
XIAOBING HUANG

Publication type:

Article

The Bermuda Triangle: The Pragmatics, Policies, and Principles for Data Sharing in the History of the Human Genome Project.

Published in:

Journal of the History of Biology, 2018, v. 51, n. 4, p. 693, doi. 10.1007/s10739-018-9538-7

By:

Maxson Jones, Kathryn;
Ankeny, Rachel A.;
Cook-Deegan, Robert

Publication type:

Article

Associations between immune cell phenotypes and lung cancer subtypes: insights from mendelian randomization analysis.

Published in:

BMC Pulmonary Medicine, 2024, v. 24, p. 1, doi. 10.1186/s12890-024-03059-w

By:

Zheng, Jin-Min;
Lou, Chen-Xi;
Huang, Yu-Liang;
Song, Wen-Tao;
Luo, Yi-Chen;
Mo, Guan-Yong;
Tan, Lin-Yuan;
Chen, Shang-Wei;
Li, Bai-Jun

Publication type:

Article

Diabetes mellitus and idiopathic pulmonary fibrosis: a Mendelian randomization study.

Published in:

BMC Pulmonary Medicine, 2024, p. 1, doi. 10.1186/s12890-024-02961-7

By:

Kang, Quou;
Ren, Jing;
Cong, Jinpeng;
Yu, Wencheng

Publication type:

Article

microRNA–mRNA Networks Linked to Inflammation and Immune System Regulation in Inflammatory Bowel Disease.

Published in:

Biomedicines, 2024, v. 12, n. 2, p. 422, doi. 10.3390/biomedicines12020422

By:

Síbia, Carina de F. de;
Quaglio, Ana E. V.;
Oliveira, Ellen C. S. de;
Pereira, Jéssica N.;
Ariede, Jovita R.;
Lapa, Rainer M. L.;
Severino, Fábio E.;
Reis, Patricia P.;
Sassaki, Lígia Y.;
Saad-Hossne, Rogerio

Publication type:

Article

Application of Machine Learning Classifier to Candida auris Drug Resistance Analysis.

Published in:

Frontiers in Cellular & Infection Microbiology, 2021, v. 11, p. 1, doi. 10.3389/fcimb.2021.742062

By:

Li, Dingchen;
Wang, Yaru;
Hu, Wenjuan;
Chen, Fangyan;
Zhao, Jingya;
Chen, Xia;
Han, Li

Publication type:

Article

Causal relationship between type 1 diabetes mellitus and six high-frequency infectious diseases: A two-sample mendelian randomization study.

Published in:

Frontiers in Endocrinology, 2023, v. 14, p. 1, doi. 10.3389/fendo.2023.1135726

By:

Xiao-Hong Chen;
Hong-Qiong Liu;
Qiong Nie;
Han Wang;
Tao Xiang

Publication type:

Article

A novel HIF1α-STIL-FOXM1 axis regulates tumor metastasis.

Published in:

Journal of Biomedical Science, 2022, v. 29, n. 1, p. 1, doi. 10.1186/s12929-022-00807-0

By:

Wang, Yi-Wei;
Chen, Shu-Chuan;
Gu, De-Leung;
Yeh, Yi-Chen;
Tsai, Jhih-Jie;
Yang, Kuo-Tai;
Jou, Yuh-Shan;
Chou, Teh-Ying;
Tang, Tang K.

Publication type:

Article

Assessing Causality Between Second-Hand Smoking and Potentially Associated Diseases in Multiple Systems: A Two-Sample Mendelian Randomization Study.

Published in:

Nicotine & Tobacco Research, 2024, v. 26, n. 6, p. 678, doi. 10.1093/ntr/ntad193

By:

Wang, Shilin;
Yang, Peiwen;
Liu, Hao;
Wang, Zhiwen;
Hu, Poyi;
Ye, Ping;
Xia, Jiahong;
Chen, Shu

Publication type:

Article

White blood cells and chronic rhinosinusitis: a Mendelian randomization study.

Published in:

Allergy, Asthma & Clinical Immunology, 2022, v. 18, n. 1, p. 1, doi. 10.1186/s13223-022-00739-2

By:

Pongdee, Thanai;
Bielinski, Suzette J.;
Decker, Paul A.;
Kita, Hirohito;
Larson, Nicholas B.

Publication type:

Article

Current approaches and developments in transcript profiling of the human placenta.

Published in:

2020

By:

Yong, Hannah E J;
Chan, Shiao-Yng

Publication type:

journal article

Investigation of Hippo pathway-related prognostic lncRNAs and molecular subtypes in liver hepatocellular carcinoma.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-31754-x

By:

Su, Qiongfei;
Hua, Fengyang;
Xiao, Wanying;
Liu, Baoqiu;
Wang, Dongxia;
Qin, Xintian

Publication type:

Article

An Integrated Study on the Differential Expression of the FOX Gene Family in Cancer and Their Response to Chemotherapy Drugs.

Published in:

Genes, 2022, v. 13, n. 10, p. N.PAG, doi. 10.3390/genes13101754

By:

Yin, Haimeng;
Fan, Xing;
Zhang, Yanqiao;
Zhao, Nan;
Zhao, Xiaoyi;
Yin, Kehan;
Zhang, Yali

Publication type:

Article

The challenges of delivering bioinformatics training in the analysis of high-throughput data.

Published in:

Briefings in Bioinformatics, 2013, v. 14, n. 5, p. 538, doi. 10.1093/bib/bbt018

By:

Carvalho, Benilton S.;
Rustici, Gabriella

Publication type:

Article

Bioinformatics training: selecting an appropriate learning content management system—an example from the European Bioinformatics Institute.

Published in:

Briefings in Bioinformatics, 2010, v. 11, n. 6, p. 552, doi. 10.1093/bib/bbq023

By:

AnnWright, Victoria;
Vaughan, Brendan W.;
Laurent, Thomas;
Lopez, Rodrigo;
Brooksbank, Cath;
Schneider, Maria Victoria

Publication type:

Article

Love-hate relationship between hepatitis B virus and type 2 diabetes: a Mendelian randomization study.

Published in:

Frontiers in Microbiology, 2024, p. 1, doi. 10.3389/fmicb.2024.1378311

By:

Yunfeng Yu;
Keke Tong;
Gang Hu;
Xinyu Yang;
Jingyi Wu;
Siyang Bai;
Rong Yu

Publication type:

Article

Causality of anti-Helicobacter pylori IgG levels on myocardial infarction and potential pathogenesis: a Mendelian randomization study.

Published in:

Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1259579

By:

Qiubo Wang;
Yingbo Liu;
Zhenxing Xu;
Zhimiao Wang;
Mei Xue;
Xinran Li;
Ye Wang

Publication type:

Article

Genetic Predispositions Between COVID-19 and Three Cardio-Cerebrovascular Diseases.

Published in:

Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2022.743905

By:

Tan, Jiang-Shan;
Liu, Ningning;
Guo, Ting-Ting;
Hu, Song;
Hua, Lu;
Qian, Qiujin

Publication type:

Article

Integrated Analysis of Microarray and RNA-Seq Data for the Identification of Hub Genes and Networks Involved in the Pancreatic Cancer.

Published in:

Frontiers in Genetics, 2021, v. 11, p. 1, doi. 10.3389/fgene.2021.663787

By:

Nisar, Maryum;
Paracha, Rehan Zafar;
Arshad, Iqra;
Adil, Sidra;
Zeb, Sabaoon;
Hanif, Rumeza;
Rafiq, Mehak;
Hussain, Zamir

Publication type:

Article

The FAANG Data Portal: Global, Open-Access, "FAIR", and Richly Validated Genotype to Phenotype Data for High-Quality Functional Annotation of Animal Genomes.

Published in:

Frontiers in Genetics, 2021, v. 11, p. 1, doi. 10.3389/fgene.2021.639238

By:

Harrison, Peter W.;
Sokolov, Alexey;
Nayak, Akshatha;
Fan, Jun;
Zerbino, Daniel;
Cochrane, Guy;
Flicek, Paul

Publication type:

Article

Design and quality control of large-scale two-sample Mendelian randomization studies.

Published in:

International Journal of Epidemiology, 2023, v. 52, n. 5, p. 1498, doi. 10.1093/ije/dyad018

By:

Haycock, Philip C;
Borges, Maria Carolina;
Burrows, Kimberley;
Lemaitre, Rozenn N;
Harrison, Sean;
Burgess, Stephen;
Chang, Xuling;
Westra, Jason;
Khankari, Nikhil K;
Tsilidis, Kostas K;
Gaunt, Tom;
Hemani, Gibran;
Zheng, Jie;
Truong, Therese;
O'Mara, Tracy A;
Spurdle, Amanda B;
Law, Matthew H;
Slager, Susan L;
Birmann, Brenda M;
Hosnijeh, Fatemeh Saberi

Publication type:

Article

MetaboLights: towards a new COSMOS of metabolomics data management.

Published in:

Metabolomics, 2012, v. 8, n. 5, p. 757, doi. 10.1007/s11306-012-0462-0

By:

Steinbeck, Christoph;
Conesa, Pablo;
Haug, Kenneth;
Mahendraker, Tejasvi;
Williams, Mark;
Maguire, Eamonn;
Rocca-Serra, Philippe;
Sansone, Susanna-Assunta;
Salek, Reza;
Griffin, Julian

Publication type:

Article

Biomartr: genomic data retrieval with R.

Published in:

Bioinformatics, 2017, v. 33, n. 8, p. 1216, doi. 10.1093/bioinformatics/btw821

By:

Drost, Hajk-Georg;
Paszkowski, Jerzy

Publication type:

Article

InterProScan 5: genome-scale protein function classification.

Published in:

Bioinformatics, 2014, v. 30, n. 9, p. 1236, doi. 10.1093/bioinformatics/btu031

By:

Jones, Philip;
Binns, David;
Chang, Hsin-Yu;
Fraser, Matthew;
Li, Weizhong;
McAnulla, Craig;
McWilliam, Hamish;
Maslen, John;
Mitchell, Alex;
Nuka, Gift;
Pesseat, Sebastien;
Quinn, Antony F.;
Sangrador-Vegas, Amaia;
Scheremetjew, Maxim;
Yong, Siew-Yit;
Lopez, Rodrigo;
Hunter, Sarah

Publication type:

Article

The EBI RDF platform: linked open data for the life sciences.

Published in:

Bioinformatics, 2014, v. 30, n. 9, p. 1338, doi. 10.1093/bioinformatics/btt765

By:

Jupp, Simon;
Malone, James;
Bolleman, Jerven;
Brandizi, Marco;
Davies, Mark;
Garcia, Leyla;
Gaulton, Anna;
Gehant, Sebastien;
Laibe, Camille;
Redaschi, Nicole;
Wimalaratne, Sarala M.;
Martin, Maria;
Le Novère, Nicolas;
Parkinson, Helen;
Birney, Ewan;
Jenkinson, Andrew M.

Publication type:

Article

A System for Information Management in BioMedical Studies—SIMBioMS.

Published in:

Bioinformatics, 2009, v. 25, n. 20, p. 2768, doi. 10.1093/bioinformatics/btp420

By:

Krestyaninova, Maria;
Zarins, Andris;
Viksna, Juris;
Kurbatova, Natalja;
Rucevskis, Peteris;
Neogi, Sudeshna Guha;
Gostev, Mike;
Perheentupa, Teemu;
Knuuttila, Juha;
Barrett, Amy;
Lappalainen, Ilkka;
Rung, Johan;
Podnieks, Karlis;
Sarkans, Ugis;
McCarthy, Mark I.;
Brazma, Alvis

Publication type:

Article

The role of smoking and alcohol in mediating the effect of gastroesophageal reflux disease on lung cancer: A Mendelian randomization study.

Published in:

Frontiers in Genetics, 2023, v. 14, p. 1, doi. 10.3389/fgene.2022.1054132

By:

Jing Yang;
Duorui Nie;
Yujing Chen;
Zixing Liu;
Mengzhao Li;
Chun Gong;
Qiong Liu

Publication type:

Article

Global map of gene expression.

Published in:: BioEssays, 2010, v. 32, n. 8, p. A3
Publication type:: Article

Italian to head bioinformatics institute.

Published in:

Nature, 1994, v. 370, n. 6484, p. 7, doi. 10.1038/370007b0

By:

Abbott, Alison

Publication type:

Article

EMBL selects Cambridge as site for new database.

Published in:

Nature, 1993, v. 362, n. 6417, p. 198, doi. 10.1038/362198c0

By:

Abbott, Alison

Publication type:

Article

α-stable laws for noncoding regions in DNA sequences.

Published in:

Journal of Applied Statistics, 2011, v. 38, n. 2, p. 261, doi. 10.1080/02664760903406447

By:

Crato, N.;
Linhares, R.R.;
Lopes, S.R.C.

Publication type:

Article

Causal role of immune cells in psoriasis: a Mendelian randomization analysis.

Published in:

Frontiers in Immunology, 2024, p. 1, doi. 10.3389/fimmu.2024.1326717

By:

Anning Wang;
Jingyuan Zhang

Publication type:

Article

Analysis of long non-coding RNAs in glioblastoma for prognosis prediction using weighted gene co-expression network analysis, Cox regression, and L1-LASSO penalization.

Published in:

OncoTargets & Therapy, 2019, v. 12, p. 157, doi. 10.2147/OTT.S171957

By:

Liang, Ruqing;
Zhi, Yaqin;
Zheng, Guizhi;
Zhang, Bin;
Zhu, Hua;
Wang, Meng

Publication type:

Article

Bioinformatics Goes to School—New Avenues for Teaching Contemporary Biology.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 6, p. 1, doi. 10.1371/journal.pcbi.1003089

By:

Wood, Louisa;
Gebhardt, Philipp

Publication type:

Article

Bioinformatics Meets User-Centred Design: A Perspective.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 7, p. 1, doi. 10.1371/journal.pcbi.1002554

By:

Pavelin, Katrina;
Cham, Jennifer A.;
de Matos, Paula;
Brooksbank, Cath;
Cameron, Graham;
Steinbeck, Christoph

Publication type:

Article

Prognostic prediction of a 12-methylation gene-based risk score system on pancreatic adenocarcinoma.

Published in:

Oncology Letters, 2020, v. 20, n. 1, p. 85, doi. 10.3892/ol.2020.11575

By:

Dou, Daoqin;
Yang, Shaohua;
Zhang, Jiren

Publication type:

Article

Rabbit targeted genomic sequences after heterologous hybridization using human exome.

Published in:

BMC Research Notes, 2022, v. 15, n. 1, p. 1, doi. 10.1186/s13104-022-06162-5

By:

Iannuccelli, Nathalie;
Sarry, Julien;
Billon, Yvon;
Aymard, Patrick;
Helies, Virginie;
Cabau, Cédric;
Donnadieu, Cécile;
Demars, Julie

Publication type:

Article

Genotyping data of French wild boar populations using porcine genome-wide genotyping array.

Published in:

BMC Research Notes, 2022, v. 15, n. 1, p. 1, doi. 10.1186/s13104-022-06052-w

By:

Iannuccelli, Nathalie;
Mary, Nicolas;
Bonnet, Nathalie;
Petit, Geoffrey;
Valle, Carine;
Ducos, Alain;
Riquet, Juliette

Publication type:

Article

The author file: Paul Bertone.

Published in:

Nature Methods, 2013, v. 10, n. 12, p. 1137, doi. 10.1038/nmeth.2747

By:

Marx, Vivien

Publication type:

Article

A home for raw proteomics data.

Published in:: Nature Methods, 2012, v. 9, n. 5, p. 419, doi. 10.1038/nmeth.2011
Publication type:: Article

Finding your way.

Published in:

Nature, 2003, v. 425, n. 6954, p. 209, doi. 10.1038/425209b

By:

Buckingham, Steve

Publication type:

Article

Institutes prepare for pioneering bioinformatics work.

Published in:

Nature, 2001, v. 412, n. 6843, p. 106, doi. 10.1038/35084343

By:

Butler, Declan

Publication type:

Article

Fresh funding offers lifeline to bioinformatics centre.

Published in:

Nature, 2001, v. 411, n. 6835, p. 229, doi. 10.1038/35077290

By:

Butler, Declan;
Abbott, Alison

Publication type:

Article

Biology moves into the silicon stage.

Published in:

Nature, 2001, v. 409, n. 6822, p. 964

By:

H.G.

Publication type:

Article

European centres rebuffed in infrastructure funding bid.

Published in:

Nature, 2000, v. 405, n. 6788, p. 723, doi. 10.1038/35015755

By:

Schiermeier, Quirin

Publication type:

Article