Works about DNA microarrays

Results: 5000

Expression and Induction of Cytochrome P450 Isoenzymes in Human Skin Equivalents.

Published in:

Skin Pharmacology & Physiology, 2010, v. 23, n. 1, p. 29, doi. 10.1159/000257261

By:

Wendel, Neis;
Marquardt, Wiederholt;
Baron, Joussen;
Merk

Publication type:

Article

Phenotypic evaluation of the basal-like subtype of invasive breast carcinoma.

Published in:

Modern Pathology, 2006, v. 19, n. 2, p. 264, doi. 10.1038/modpathol.3800528

By:

Livasy, Chad A.;
Karaca, Gamze;
Nanda, Rita;
Tretiakova, Maria S.;
Olopade, Olufunmilayo I.;
Moore, Dominic T.;
Perou, Charles M.

Publication type:

Article

TMA-Combiner, a simple software tool to permit analysis of replicate cores on tissue microarrays.

Published in:

Modern Pathology, 2005, v. 18, n. 12, p. 1641, doi. 10.1038/modpathol.3800491

By:

Chih Long Liu;
Montgomery, Kelli D.;
Natkunam, Yasodha;
West, Robert B.;
Nielsen, Torsten O.;
Cheang, Maggie C. U.;
Turbin, Dmitry A.;
Marinelli, Robert J.;
van de Rijn, Matt;
Higgins, John P. T.

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Article

Novel endothelial cell markers in hepatocellular carcinoma.

Published in:

Modern Pathology, 2004, v. 17, n. 10, p. 1198, doi. 10.1038/modpathol.3800167

By:

Xin Chen;
Higgins, John;
Siu-tim Cheung;
Rui Li;
Mason, Veronica;
Montgomery, Kelli;
Sheung-tat Fan;
Rijn, Matt Van De;
Samuel So

Publication type:

Article

Expression of PAX5 in CD20-positive multiple myeloma assessed by immunohistochemistry and oligonucleotide microarray.

Published in:

Modern Pathology, 2004, v. 17, n. 10, p. 1217, doi. 10.1038/modpathol.3800169

By:

Pei Lin;
Mahdavy, Mustafa;
Zhan, Fenghuang;
Hua-zhong Zhang;
Katz, Ruth L.;
Shaughnessy, John D.

Publication type:

Article

Utilizing Nottingham Prognostic Index in microarray gene expression profiling of breast carcinomas.

Published in:

Modern Pathology, 2004, v. 17, n. 7, p. 756, doi. 10.1038/modpathol.3800114

By:

Miller, Dylan V.;
Leontovich, Alexey A.;
Lingle, Wilma L.;
Suman, Vera J.;
Mertens, Maureen L.;
Lillie, James;
Ingalls, Kimberly A.;
Perez, Edith A.;
Ingle, James N.;
Couch, Fergus J.;
Visscher, Daniel W.

Publication type:

Article

Molecular genetics of human prostate cancer.

Published in:

Modern Pathology, 2004, v. 17, n. 3, p. 380, doi. 10.1038/modpathol.3800051

By:

Rubin, Mark A.;
De Marzo, Angelo M.

Publication type:

Article

The Multicopy Gene Sly Represses the Sex Chromosomesin the Male Mouse Germline after Meiosis.

Published in:

PLoS Biology, 2009, v. 7, n. 11, p. 1, doi. 10.1371/journal.pbio.1000244

By:

Cocquet, Julie;
Ellis, Peter J. I.;
Yamauchi, Yasuhiro;
Mahadevaiah, Shantha K.;
Affara, Nabeel A.;
Ward, Monika A.;
Burgoyne, Paul S.

Publication type:

Article

Daughter-Specific Transcription Factors Regulate Cell Size Control in Budding Yeast.

Published in:

PLoS Biology, 2009, v. 7, n. 10, p. 1, doi. 10.1371/journal.pbio.1000221

By:

Di Talia, Stefano;
Hongyin Wang;
Skotheim, Jan M.;
Rosebrock, Adam P.;
Futcher, Bruce;
Cross, Frederick R.

Publication type:

Article

Large-Scale Mapping and Validation of Escherichia coli Transcriptional Regulation from a Compendium of Expression Profiles.

Published in:

PLoS Biology, 2007, v. 5, n. 1, p. 54, doi. 10.1371/journal.pbio.0050008

By:

Faith, Jeremiah J.;
Hayete, Boris;
Thaden, Joshua T.;
Mogno, Ilaria;
Wierzbowski, Jamey;
Cottarel, Guillaume;
Kasif, Simon;
Collins, James J.;
Gardner, Timothy S.

Publication type:

Article

Ammonium Toxicity and Potassium Limitation in Yeast.

Published in:

PLoS Biology, 2006, v. 4, n. 11, p. 2012, doi. 10.1371/journal.pbio.0040351

By:

Hess, David C.;
Wenyun Lu;
Rabinowitz, Joshua D.;
Botstein, David

Publication type:

Article

Gene Expression in the Aging Brain.

Published in:: PLoS Biology, 2005, v. 3, n. 9, p. 1520, doi. 10.1371/journal.pbio.0030313
Publication type:: Article

Islands in the Genome Promote Speciation.

Published in:: PLoS Biology, 2005, v. 3, n. 9, p. 1513, doi. 10.1371/journal.pbio.0030318
Publication type:: Article

Aging and Gene Expression in the Primate Brain.

Published in:

PLoS Biology, 2005, v. 3, n. 9, p. 1653, doi. 10.1371/journal.pbio.0030274

By:

Fraser, Hunter B.;
Khaitovich, Philipp;
Plotkin, Joshua B.;
Pääbo, Svante;
Eisen, Michael B.

Publication type:

Article

Genomic Islands of Speciation in Anopheles gambiae.

Published in:

PLoS Biology, 2005, v. 3, n. 8, p. 1, doi. 10.1371/journal.pbio.0030285

By:

Turner, Thomas L;
Hahn, Matthew W;
Nuzhdin, Sergey V

Publication type:

Article

Aging and Gene Expression in the Primate Brain.

Published in:

PLoS Biology, 2005, v. 3, n. 8, p. 1, doi. 10.1371/journal.pbio.0030274

By:

Fraser, Hunter B;
Khaitovich, Philipp;
Plotkin, Joshua B;
Pääbo, Svante;
Eisen, Michael B

Publication type:

Article

Activity of β2-adrenergic receptor in oral squamous cell carcinoma is mediated by overexpression of the ADRBK2 gene: a pilot study.

Published in:

Biotechnic & Histochemistry, 2012, v. 87, n. 3, p. 179, doi. 10.3109/10520295.2011.592151

By:

Pérez-Sayáns, M;
Somoza-Martín, JM;
Barros-Angueira, F;
Gayoso-Diz, P;
Otero-Rey, EM;
Gándra-Rey, JM;
García-García, A

Publication type:

Article

ORAL PRESENTATION cDNA array studies of natural and pharmacologically induced sleep.

Published in:

Sleep & Biological Rhythms, 2004, v. 2, p. S31, doi. 10.1111/j.1479-8425.2004.00099.x

By:

Kilduff, Thomas S.;
Steininger, Teresa L.;
Terao, Akira

Publication type:

Article

Laser capture microdissection/GeneChip analysis of gene expression in glomerular cells in diabetic db/db mice.

Published in:

Redox Report, 2004, v. 9, n. 6, p. 307, doi. 10.1179/135100004225006786

By:

Naito, Yuji;
Uchiyama, Kazuhiko;
Kuroda, Masaaki;
Mizushima, Katsura;
Aoi, Wataru;
Kokura, Satoshi;
Ichikawa, Hiroshi;
Yoshida, Norimasa;
Yoshikawa, Toshikazu

Publication type:

Article

Identification of phenotype-relevant differentially expressed genes in breast cancer demonstrates enhanced quantile discretization protocol's utility in multi-platform microarray data integration.

Published in:

Journal of Bioinformatics & Computational Biology, 2016, v. 14, n. 5, p. -1, doi. 10.1142/S0219720016500220

By:

Mapiye, Darlington S.;
Christoffels, Alan G.;
Gamieldien, Junaid

Publication type:

Article

PROBABILISTIC NON-NEGATIVE MATRIX FACTORIZATION: THEORY AND APPLICATION TO MICROARRAY DATA ANALYSIS.

Published in:

Journal of Bioinformatics & Computational Biology, 2014, v. 12, n. 1, p. -1, doi. 10.1142/S0219720014500012

By:

BAYAR, BELHASSEN;
BOUAYNAYA, NIDHAL;
SHTERENBERG, ROMAN

Publication type:

Article

VOLCANO PLOTS IN ANALYZING DIFFERENTIAL EXPRESSIONS WITH mRNA MICROARRAYS.

Published in:

Journal of Bioinformatics & Computational Biology, 2012, v. 10, n. 6, p. -1, doi. 10.1142/S0219720012310038

By:

LI, WENTIAN

Publication type:

Article

USING ATTRIBUTE BEHAVIOR DIVERSITY TO BUILD ACCURATE DECISION TREE COMMITTEES FOR MICROARRAY DATA.

Published in:

Journal of Bioinformatics & Computational Biology, 2012, v. 10, n. 4, p. 1250005-1, doi. 10.1142/S0219720012500059

By:

HAN, QIAN;
DONG, GUOZHU

Publication type:

Article

CLASSIFICATION OF LARGE MICROARRAY DATASETS USING FAST RANDOM FOREST CONSTRUCTION.

Published in:

Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 2, p. 251, doi. 10.1142/S021972001100546X

By:

MANILICH, ELENA A.;
ÖZSOYOǦLU, Z. MERAL;
TRUBACHEV, VALERIY;
RADIVOYEVITCH, TOMAS

Publication type:

Article

TEMPORAL GRAPHICAL MODELS FOR CROSS-SPECIES GENE REGULATORY NETWORK DISCOVERY.

Published in:

Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 2, p. 231, doi. 10.1142/S0219720011005525

By:

LIU, YAN;
NICULESCU-MIZIL, ALEXANDRU;
LOZANO, AURÉLIE;
LU, YONG

Publication type:

Article

DIGOUT:: VIEWING DIFFERENTIAL EXPRESSION GENES AS OUTLIERS.

Published in:

Journal of Bioinformatics & Computational Biology, 2010, v. 8, p. 161, doi. 10.1142/S0219720010005208

By:

YU, HUI;
TU, KANG;
XIE, LU;
LI, YUAN-YUAN

Publication type:

Article

ENVIRONMENTAL DEPENDENCY OF GENE KNOCKOUTS ON PHENOTYPE MICROARRAY ANALYSIS IN ESCHERICHIA COLI.

Published in:

Journal of Bioinformatics & Computational Biology, 2010, v. 8, p. 83, doi. 10.1142/S021972001000521X

By:

TOHSATO, YUKAKO;
BABA, TOMOYA;
MAZAKI, YUSAKU;
ITO, MASAHIRO;
WANNER, BARRY L.;
MORI, HIROTADA

Publication type:

Article

MULTI-FACTORIAL ANALYSIS OF CLASS PREDICTION ERROR:: ESTIMATING OPTIMAL NUMBER OF BIOMARKERS FOR VARIOUS CLASSIFICATION RULES.

Published in:

Journal of Bioinformatics & Computational Biology, 2010, v. 8, n. 6, p. 945, doi. 10.1142/S0219720010005063

By:

KHONDOKER, MIZANUR R.;
BACHMANN, TILL T.;
MEWISSEN, MURIEL;
DICKINSON, PAUL;
DOBRZELECKI, BARTOSZ;
CAMPBELL, COLIN J.;
MOUNT, ANDREW R.;
WALTON, ANTHONY J.;
CRAIN, JASON;
SCHULZE, HOLGER;
GIRAUD, GERARD;
ROSS, ALAN J.;
CIANI, ILENIA;
EMBER, STUART W. J.;
TLILI, CHAKER;
TERRY, JONATHAN G.;
GRANT, EILIDH;
McDONNELL, NICOLA;
GHAZAL, PETER

Publication type:

Article

COMPARING PEARSON, SPEARMAN AND HOEFFDING'S D MEASURE FOR GENE EXPRESSION ASSOCIATION ANALYSIS.

Published in:

Journal of Bioinformatics & Computational Biology, 2009, v. 7, n. 4, p. 663, doi. 10.1142/S0219720009004230

By:

FUJITA, ANDRÉ;
SATO, JOÃO RICARDO;
DEMASI, MARCOS ANGELO ALMEIDA;
SOGAYAR, MARI CLEIDE;
FERREIRA, CARLOS EDUARDO;
MIYANO, SATORU

Publication type:

Article

EVALUATION OF INTER-LABORATORY AND CROSS-PLATFORM CONCORDANCE OF DNA MICROARRAYS THROUGH DISCRIMINATING GENES AND CLASSIFIER TRANSFERABILITY.

Published in:

Journal of Bioinformatics & Computational Biology, 2009, v. 7, n. 1, p. 157, doi. 10.1142/S0219720009004011

By:

MAO, SHIHONG;
WANG, CHARLES;
DONG, GUOZHU

Publication type:

Article

ANALYSIS OF NONLINEAR RELATIONS BETWEEN EXPRESSION PROFILES BY THE PRINCIPAL CURVES OF ORIENTED-POINTS APPROACH.

Published in:

Journal of Bioinformatics & Computational Biology, 2008, v. 6, n. 2, p. 367, doi. 10.1142/S0219720008003394

By:

HUERTA, MARIO;
CEDANO, JUAN;
QUEROL, ENRIQUE

Publication type:

Article

TESTING DIFFERENTIAL EXPRESSION IN NONOVERLAPPING GENE PAIRS:: A NEW PERSPECTIVE FOR THE EMPIRICAL BAYES METHOD.

Published in:

Journal of Bioinformatics & Computational Biology, 2008, v. 6, n. 2, p. 301, doi. 10.1142/S0219720008003436

By:

KLEBANOV, LEV;
QIU, XING;
YAKOVLEV, ANDREI

Publication type:

Article

SEMIPARAMETRIC CLUSTERING METHOD FOR MICROARRAY DATA ANALYSIS.

Published in:

Journal of Bioinformatics & Computational Biology, 2008, v. 6, n. 2, p. 261, doi. 10.1142/S021972000800345X

By:

YUAN, AO;
HE, WENQING

Publication type:

Article

SPOT INTENSITY RATIO STATISTICS IN TWO-CHANNEL MICROARRAY EXPERIMENTS.

Published in:

Journal of Bioinformatics & Computational Biology, 2007, v. 5, n. 4, p. 865, doi. 10.1142/S0219720007002928

By:

PARK, TAESUNG;
KIM, KIWOONG;
YI, SUNG-GON;
KIM, JIN HYUK;
LEE, YONG-SUNG;
LEE, SEUNGYEOUN

Publication type:

Article

EVALUATION OF NORMALIZATION AND PRE-CLUSTERING ISSUES IN A NOVEL CLUSTERING APPROACH:: GLOBAL OPTIMUM SEARCH WITH ENHANCED POSITIONING.

Published in:

Journal of Bioinformatics & Computational Biology, 2007, v. 5, n. 4, p. 895, doi. 10.1142/S0219720007002941

By:

TAN, MENG P.;
BROACH, JAMES R.;
FLOUDAS, CHRISTODOULOS A.

Publication type:

Article

COMMENTS ON PROBABILISTIC MODELS BEHIND THE CONCEPT OF FALSE DISCOVERY RATE.

Published in:

Journal of Bioinformatics & Computational Biology, 2007, v. 5, n. 4, p. 963, doi. 10.1142/S0219720007002965

By:

QIU, XING;
YAKOVLEV, ANDREI

Publication type:

Article

ALGORITHMIC APPROACHES TO SELECTING CONTROL CLONES IN DNA ARRAY HYBRIDIZATION EXPERIMENTS.

Published in:

Journal of Bioinformatics & Computational Biology, 2007, v. 5, n. 4, p. 937, doi. 10.1142/S0219720007002977

By:

FU, QI;
BENT, ELIZABETH;
BORNEMAN, JAMES;
CHROBAK, MAREK;
YOUNG, NEAL E.

Publication type:

Article

A PRACTICAL QUESTION BASED ON CROSS-PLATFORM MICROARRAY DATA NORMALIZATION:: ARE BOEC MORE LIKE LARGE VESSEL OR MICROVASCULAR ENDOTHELIAL CELLS OR NEITHER OF THEM?

Published in:

Journal of Bioinformatics & Computational Biology, 2007, v. 5, n. 4, p. 875, doi. 10.1142/S0219720007002989

By:

JIANG, AIXIANG;
PAN, WEI;
MILBAUER, LIMING C.;
SHYR, YU;
HEBBEL, ROBERT P.

Publication type:

Article

AN EFFECTIVE DATA MINING TECHNIQUE FOR RECONSTRUCTING GENE REGULATORY NETWORKS FROM TIME SERIES EXPRESSION DATA.

Published in:

Journal of Bioinformatics & Computational Biology, 2007, v. 5, n. 3, p. 651, doi. 10.1142/S0219720007002692

By:

MA, PATRICK C. H.;
CHAN, KEITH C. C.

Publication type:

Article

MOLECULAR NETWORKS IN MICROARRAY ANALYSIS.

Published in:

Journal of Bioinformatics & Computational Biology, 2007, v. 5, n. 2b, p. 429, doi. 10.1142/S0219720007002795

By:

SIVACHENKO, ANDREY Y.;
YURYEV, ANTON;
DARASELIA, NIKOLAI;
MAZO, ILYA

Publication type:

Article

RECONSTRUCTING TUMOR PHYLOGENIES FROM HETEROGENEOUS SINGLE-CELL DATA.

Published in:

Journal of Bioinformatics & Computational Biology, 2007, v. 5, n. 2a, p. 407, doi. 10.1142/S021972000700259X

By:

PENNINGTON, GREGORY;
SMITH, CHARLES A.;
SHACKNEY, STANLEY;
SCHWARTZ, RUSSELL

Publication type:

Article

IDENTIFYING DIFFERENTIALLY EXPRESSED GENES IN TIME-COURSE MICROARRAY EXPERIMENT WITHOUT REPLICATE.

Published in:

Journal of Bioinformatics & Computational Biology, 2007, v. 5, n. 2a, p. 281, doi. 10.1142/S0219720007002655

By:

HAN, XU;
SUNG, WING-KIN;
FENG, LIN

Publication type:

Article

SIMILARITIES OF ORDERED GENE LISTS.

Published in:

Journal of Bioinformatics & Computational Biology, 2006, v. 4, n. 3, p. 693, doi. 10.1142/S0219720006002120

By:

YANG, XINAN;
BENTINK, STEFAN;
SCHEID, STEFANIE;
SPANG, RAINER

Publication type:

Article

AUTOMATED VALIDATION OF POLYMERASE CHAIN REACTION AMPLICON MELTING CURVES.

Published in:

Journal of Bioinformatics & Computational Biology, 2006, v. 4, n. 2, p. 299, doi. 10.1142/S0219720006001989

By:

Mann, Tobias P.;
Humbert, Richard;
Stamatoyannopolous, John A.;
Noble, William Stafford

Publication type:

Article

SYMMETRIC AND ASYMMETRIC MULTI-MODALITY BICLUSTERING ANALYSIS FOR MICROARRAY DATA MATRIX.

Published in:

Journal of Bioinformatics & Computational Biology, 2006, v. 4, n. 2, p. 275, doi. 10.1142/S0219720006002065

By:

Sun-Yuan Kung;
Man-Wai Mak;
Tagkopoulos, Ilias

Publication type:

Article

DISCOVERY OF HIGHLY DIFFERENTIATIVE GENE GROUPS FROM MICROARRAY GENE EXPRESSION DATA USING THE GENE CLUB APPROACH.

Published in:

Journal of Bioinformatics & Computational Biology, 2005, v. 3, n. 6, p. 1263, doi. 10.1142/S0219720005001545

By:

MAO, SHIHONG;
DONG, GUOZHU

Publication type:

Article

UTILIZING EVOLUTIONARY INFORMATION AND GENE EXPRESSION DATA FOR ESTIMATING GENE NETWORKS WITH BAYESIAN NETWORK MODELS.

Published in:

Journal of Bioinformatics & Computational Biology, 2005, v. 3, n. 6, p. 1295, doi. 10.1142/S0219720005001569

By:

TAMADA, YOSHINORI;
KANEHISA, MINORU;
BANNAI, HIDEO;
IMOTO, SEIYA;
KATAYAMA, TOSHIAKI;
MIYANO, SATORU

Publication type:

Article

LINEAR INDEPENDENCE OF PAIRWISE COMPARISONS OF DNA MICROARRAY DATA.

Published in:

Journal of Bioinformatics & Computational Biology, 2005, v. 3, n. 6, p. 1243, doi. 10.1142/S0219720005001600

By:

LONGACRE, ANGELIKA;
SCOTT, L. RIDGWAY;
LEVINE, JERROLD S.

Publication type:

Article

A ROBUST ALGORITHM FOR RATIO ESTIMATION IN TWO-COLOR MICROARRAY EXPERIMENTS.

Published in:

Journal of Bioinformatics & Computational Biology, 2005, v. 3, n. 6, p. 1411, doi. 10.1142/S0219720005001624

By:

NOVIKOV, EUGENE;
BARILLOT, EMMANUEL

Publication type:

Article

RANK-BASED METHODS AS A NON-PARAMETRIC ALTERNATIVE OF THE T-STATISTIC FOR THE ANALYSIS OF BIOLOGICAL MICROARRAY DATA.

Published in:

Journal of Bioinformatics & Computational Biology, 2005, v. 3, n. 5, p. 1171, doi. 10.1142/S0219720005001442

By:

BREITLING, RAINER;
HERZYK, PAWEL

Publication type:

Article