Works matching DE "DNA glycosylases"

Results: 233

Erasing Methylation Marks on DNA by Plant-Specific DEMETER Family DNA Glycosylases.

Published in:

Journal of Plant Growth Regulation, 2025, v. 44, n. 5, p. 1810, doi. 10.1007/s00344-024-11533-2

By:

Rai, Praveen;
Kumari, Poonam;
Gaur, Vineet

Publication type:

Article

Swift, strandwise translocation.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 2, p. 135, doi. 10.1038/nsmb.2249

By:

Eggleston, Angela K.

Publication type:

Article

Insights into the substrate discrimination mechanisms of methyl-CpG-binding domain 4.

Published in:

Biochemical Journal, 2021, v. 478, n. 10, p. 1985, doi. 10.1042/BCJ20210017

By:

Ouzon-Shubeita, Hala;
Schmaltz, Lillian F.;
Seongmin Lee

Publication type:

Article

Catalytic mechanism of the mismatch-specific DNA glycosylase methyl-CpG-binding domain 4.

Published in:

Biochemical Journal, 2020, v. 477, n. 9, p. 1601, doi. 10.1042/BCJ20200125

By:

Ouzon-Shubeita, Hala;
Hunmin Jung;
Lee, Michelle H.;
Myong-Chul Koag;
Seongmin Lee

Publication type:

Article

NEIL1 and NEIL2 DNA glycosylases modulate anxiety and learning in a cooperative manner in mice.

Published in:

Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-02864-x

By:

Hildrestrand, Gunn A.;
Rolseth, Veslemøy;
Kunath, Nicolas;
Suganthan, Rajikala;
Jensen, Vidar;
Bugaj, Anna M.;
Fernandez-Berrocal, Marion S.;
Sikko, Sunniva B.;
Vetlesen, Susanne;
Kuśnierczyk, Anna;
Olsen, Ann-Karin;
Gützkow, Kristine B.;
Rowe, Alexander D.;
Wang, Wei;
Moldestad, Olve;
Syrstad, Monica D.;
Slupphaug, Geir;
Eide, Lars;
Klungland, Arne;
Sætrom, Pål

Publication type:

Article

Non-flipping DNA glycosylase AlkD scans DNA without formation of a stable interrogation complex.

Published in:

Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-02400-x

By:

Ahmadi, Arash;
Till, Katharina;
Backe, Paul Hoff;
Blicher, Pernille;
Diekmann, Robin;
Schüttpelz, Mark;
Glette, Kyrre;
Tørresen, Jim;
Bjørås, Magnar;
Rowe, Alexander D.;
Dalhus, Bjørn

Publication type:

Article

Conformational Dynamics of Biopolymers in the Course of Their Interaction: Multifaceted Approaches to the Analysis by the Stopped-Flow Technique with Fluorescence Detection.

Published in:

Photonics, 2023, v. 10, n. 9, p. 1033, doi. 10.3390/photonics10091033

By:

Kuznetsov, Nikita A.

Publication type:

Article

Telomere maintenance: regulating hTERC fate through RNA modifications.

Published in:

2019

By:

Lirussi, Lisa;
Nilsen, Hilde

Publication type:

Opinion

The maize gene maternal derepression of r1 encodes a DNA glycosylase that demethylates DNA and reduces siRNA expression in the endosperm.

Published in:

Plant Cell, 2022, v. 34, n. 10, p. 3685, doi. 10.1093/plcell/koac199

By:

Gent, Jonathan I.;
Higgins, Kaitlin M.;
Swentowsky, Kyle W.;
Fang-Fang Fu;
Yibing Zeng;
Dong won Kim;
Dawe, R. Kelly;
Springer, Nathan M.;
Anderson, Sarah N.

Publication type:

Article

Embryo and Endosperm Inherit Distinct Chromatin and Transcriptional States from the Female Gametes in Arabidopsis.

Published in:

Plant Cell, 2010, v. 22, n. 2, p. 307, doi. 10.1105/tpc.109.071647

By:

Pillot, Marion;
Baroux, Célia;
Vazquez, Mario Arteaga;
Autran, Daphné;
Leblanc, Olivier;
Vielle-Calzada, Jean Philippe;
Grossniklaus, Ueli;
Grimanelli, Daniel

Publication type:

Article

DNA repair genes polymorphisms and genetic susceptibility to Philadelphia-negative myeloproliferative neoplasms in a Portuguese population: The role of base excision repair genes polymorphisms.

Published in:

Oncology Letters, 2017, v. 13, n. 6, p. 4641, doi. 10.3892/ol.2017.6065

By:

AZEVEDO, ANA P.;
SILVA, SUSANA N.;
DE LIMA, JOÃO P.;
REICHERT, ALICE;
LIMA, FERNANDO;
JÚNIOR, ESMERALDINA;
RUEFF, JOSÉ

Publication type:

Article

Cognitive Function Is Associated with the Genetically Determined Efficiency of DNA Repair Mechanisms.

Published in:

Genes, 2024, v. 15, n. 2, p. 153, doi. 10.3390/genes15020153

By:

Cherbuin, Nicolas;
Patel, Hardip;
Walsh, Erin I.;
Ambikairajah, Ananthan;
Burns, Richard;
Brüstle, Anne;
Rasmussen, Lene Juel

Publication type:

Article

Displacement of Slow-Turnover DNA Glycosylases by Molecular Traffic on DNA.

Published in:

Genes, 2020, v. 11, n. 8, p. 866, doi. 10.3390/genes11080866

By:

Yudkina, Anna V.;
Endutkin, Anton V.;
Diatlova, Eugenia A.;
Moor, Nina A.;
Vokhtantsev, Ivan P.;
Grin, Inga R.;
Zharkov, Dmitry O.

Publication type:

Article

The Biochemical Role of the Human NEIL1 and NEIL3 DNA Glycosylases on Model DNA Replication Forks.

Published in:

Genes, 2019, v. 10, n. 4, p. 315, doi. 10.3390/genes10040315

By:

Albelazi, Mustafa S.;
Martin, Peter R.;
Mohammed, Soran;
Mutti, Luciano;
Parsons, Jason L.;
Elder, Rhoderick H.

Publication type:

Article

DNA Damage Tolerance Mechanisms Revealed from the Analysis of Immunoglobulin V Gene Diversification in Avian DT40 Cells.

Published in:

Genes, 2018, v. 9, n. 12, p. 614, doi. 10.3390/genes9120614

By:

Abe, Takuya;
Branzei, Dana;
Hirota, Kouji

Publication type:

Article

Genome-Wide Characterization of DNA Demethylase Genes and Their Association with Salt Response in Pyrus.

Published in:

Genes, 2018, v. 9, n. 8, p. 398, doi. 10.3390/genes9080398

By:

Li, Hui;
Lin, Jing;
Wang, Ying;
Chang, Yonghong;
Liu, Chunxiao;
Cheng, Zong-Ming (Max);
Xu, Xiaoyang

Publication type:

Article

Pre-Replicative Repair of Oxidized Bases Maintains Fidelity in Mammalian Genomes: The Cowcatcher Role of NEIL1 DNA Glycosylase.

Published in:

Genes, 2017, v. 8, n. 7, p. 175, doi. 10.3390/genes8070175

By:

Rangaswamy, Suganya;
Pandey, Arvind;
Mitra, Sankar;
Hegde, Muralidhar L.

Publication type:

Article

Mutational and Kinetic Analysis of Lesion Recognition by Escherichia coli Endonuclease VIII.

Published in:

Genes, 2017, v. 8, n. 5, p. 140, doi. 10.3390/genes8050140

By:

Kladova, Olga A.;
Kuznetsova, Alexandra A.;
Fedorova, Olga S.;
Kuznetsov, Nikita A.

Publication type:

Article

Sulfolobus acidocaldarius UDG Can Remove dU from the RNA Backbone: Insight into the Specific Recognition of Uracil Linked with Deoxyribose.

Published in:

Genes, 2017, v. 8, n. 1, p. 38, doi. 10.3390/genes8010038

By:

Gang-Shun Yi;
Wei-Wei Wang;
Wei-Guo Cao;
Feng-Ping Wang;
Xi-Peng Liu

Publication type:

Article

Oxygenation of the Newborn: A Molecular Approach.

Published in:

Neonatology (16617800), 2012, v. 101, n. 4, p. 315, doi. 10.1159/000337345

By:

Saugstad, Ola Didrik;
Sejersted, Yngve;
Solberg, Rønnaug;
Wollen, Embjørg J.;
Bjørås, Magnar

Publication type:

Article

YwqL (EndoV), ExoA and PolA act in a novel alternative excision pathway to repair deaminated DNA bases in Bacillus subtilis.

Published in:

PLoS ONE, 2019, v. 14, n. 2, p. 1, doi. 10.1371/journal.pone.0211653

By:

Patlán, Adriana G.;
Ayala-García, Víctor M.;
Valenzuela-García, Luz I.;
Meneses-Plascencia, Jimena;
Vargas-Arias, Pedro L.;
Barraza-Salas, Marcelo;
Setlow, Peter;
Brieba, Luis G.;
Pedraza-Reyes, Mario

Publication type:

Article

Association of hOGG1 Ser326Cys, ITGA2 C807T, TNF-A -308G>A and XPD Lys751Gln polymorphisms with the survival of Malaysian NPC patients.

Published in:

PLoS ONE, 2018, v. 13, n. 6, p. 1, doi. 10.1371/journal.pone.0198332

By:

Ban, Eng-Zhuan;
Lye, Munn-Sann;
Chong, Pei Pei;
Yap, Yoke-Yeow;
Lim, Siew Ying Crystale;
Abdul Rahman, Hejar

Publication type:

Article

Robust quantitative assessments of cytosine modifications and changes in the expressions of related enzymes in gastric cancer.

Published in:

Gastric Cancer, 2015, v. 18, n. 3, p. 516, doi. 10.1007/s10120-014-0409-4

By:

Du, Chunping;
Kurabe, Nobuya;
Matsushima, Yoshitaka;
Suzuki, Masako;
Kahyo, Tomoaki;
Ohnishi, Ippei;
Tanioka, Fumihiko;
Tajima, Shogo;
Goto, Masanori;
Yamada, Hidetaka;
Tao, Hong;
Shinmura, Kazuya;
Konno, Hiroyuki;
Sugimura, Haruhiko

Publication type:

Article

The DNA glycosylase AlkD uses a non-base-flipping mechanism to excise bulky lesions.

Published in:

Nature, 2015, v. 527, n. 7577, p. 254, doi. 10.1038/nature15728

By:

Mullins, Elwood A.;
Shi, Rongxin;
Parsons, Zachary D.;
Yuen, Philip K.;
David, Sheila S.;
Igarashi, Yasuhiro;
Eichman, Brandt F.

Publication type:

Article

Mitochondrial base excision repair positively correlates with longevity in the liver and heart of mammals.

Published in:

GeroScience, 2020, v. 42, n. 2, p. 653, doi. 10.1007/s11357-020-00158-4

By:

Gredilla, Ricardo;
Sánchez-Román, Inés;
Gómez, Alexia;
López-Torres, Mónica;
Barja, Gustavo

Publication type:

Article

Efficient Synthesis of 5-Carboxy-2′-Deoxypyrimidine Nucleoside 5′-Triphosphates.

Published in:

Nucleosides, Nucleotides & Nucleic Acids, 2016, v. 35, n. 6, p. 295, doi. 10.1080/15257770.2016.1154971

By:

Gong, Shan-Shan;
Sun, Jian;
You, Yue-Hai;
Chen, Ji-Zong;
Liu, Guo-Dong;
Sun, Qi

Publication type:

Article

A new family with a homozygous nonsense variant in NTHL1 further delineated the clinical phenotype of NTHL1-associated polyposis.

Published in:

2019

By:

Altaraihi, Mays;
Gerdes, Anne-Marie;
Wadt, Karin

Publication type:

Case Study

Developing plant‐derived DNA repair enzyme resources through studying the involvement of base excision repair DNA glycosylases in stress responses of plants.

Published in:

Physiologia Plantarum, 2025, v. 177, n. 2, p. 1, doi. 10.1111/ppl.70162

By:

Zhao, Ying;
Chen, Daniel;
Grin, Inga R.;
Zharkov, Dmitry O.;
Yu, Bing

Publication type:

Article

Initiation of the ATM-Chk2 DNA damage response through the base excision repair.

Published in:

Carcinogenesis, 2015, v. 36, n. 8, p. 832, doi. 10.1093/carcin/bgv079

By:

Wen-Cheng Chou;
Ling-Yueh Hu;
Chia-Ni Hsiung;
Chen-Yang Shen

Publication type:

Article

DNA glycosylase activity and cell proliferation are key factors in modulating homologous recombination in vivo.

Published in:

Carcinogenesis, 2014, v. 35, n. 11, p. 2495, doi. 10.1093/carcin/bgu177

By:

Kiraly, Orsolya;
Gong, Guanyu;
Roytman, Megan D.;
Yamada, Yoshiyuki;
Samson, Leona D.;
Engelward, Bevin P.

Publication type:

Article

hOGG1-Cys326 variant cells are hypersensitive to DNA repair inhibition by nitric oxide.

Published in:

Carcinogenesis, 2014, v. 35, n. 6, p. 1, doi. 10.1093/carcin/bgu066

By:

Moritz, Eva;
Pauly, Karin;
Bravard, Anne;
Hall, Janet;
Radicella, J. Pablo;
Epe, Bernd

Publication type:

Article

Cancer-associated variants and a common polymorphism of MUTYH exhibit reduced repair of oxidative DNA damage using a GFP-based assay in mammalian cells.

Published in:

Carcinogenesis, 2012, v. 33, n. 11, p. 2301, doi. 10.1093/carcin/bgs270

By:

Raetz, Alan G.;
Xie, Yali;
Kundu, Sucharita;
Brinkmeyer, Megan K.;
Chang, Cindy;
David, Sheila S.

Publication type:

Article

Geminiviruses employ host DNA glycosylases to subvert DNA methylation-mediated defense.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28262-3

By:

Gui, Xiaojian;
Liu, Chang;
Qi, Yijun;
Zhou, Xueping

Publication type:

Article

Structural evolution of a DNA repair self-resistance mechanism targeting genotoxic secondary metabolites.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-27284-7

By:

Mullins, Elwood A.;
Dorival, Jonathan;
Tang, Gong-Li;
Boger, Dale L.;
Eichman, Brandt F.

Publication type:

Article

DNA repair glycosylase hNEIL1 triages damaged bases via competing interaction modes.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-24431-y

By:

Liu, Menghao;
Zhang, Jun;
Zhu, Chenxu;
Zhang, Xiaoxue;
Xiao, Weide;
Yan, Yongchang;
Liu, Lulu;
Zeng, Hu;
Gao, Yi Qin;
Yi, Chengqi

Publication type:

Article

Differential effects of silver nanoparticles on DNA damage and DNA repair gene expression in Ogg1-deficient and wild type mice.

Published in:

Nanotoxicology, 2017, v. 11, n. 8, p. 996, doi. 10.1080/17435390.2017.1388863

By:

Nallanthighal, Sameera;
Chan, Cadia;
Murray, Thomas M.;
Mosier, Aaron P.;
Cady, Nathaniel C.;
Reliene, Ramune

Publication type:

Article

Long-term exposures to low doses of titanium dioxide nanoparticles induce cell transformation, but not genotoxic damage in BEAS-2B cells.

Published in:

Nanotoxicology, 2015, v. 9, n. 5, p. 568, doi. 10.3109/17435390.2014.957252

By:

Vales, Gerard;
Rubio, Laura;
Marcos, Ricard

Publication type:

Article

Oestrogen receptor β regulates epigenetic patterns at specific genomic loci through interaction with thymine DNA glycosylase.

Published in:

Epigenetics & Chromatin, 2016, v. 9, p. 1, doi. 10.1186/s13072-016-0055-7

By:

Yun Liu;
William Duong;
Krawczyk, Claudia;
Bretschneider, Nancy;
Borbély, Gábor;
Varshney, Mukesh;
Zinser, Christian;
Schär, Primo;
Rüegg, Joëlle

Publication type:

Article

Genome-wide analysis reveals TET-and TDGmediated 5-methylcytosine oxidation dynamics.

Published in:

2013

By:

Li Shen;
Hao Wu;
Diep, Dinh;
D'Alessio, Ana C.;
Fung, Alan;
Kun Zhang;
Yi Zhang

Publication type:

Conference Paper/Materials

Genome-wide analysis reveals TET-and TDGmediated 5-methylcytosine oxidation dynamics.

Published in:

2013

By:

Li Shen;
Hao Wu;
Diep, Dinh;
D'Alessio, Ana C.;
Fung, Alan;
Kun Zhang;
Yi Zhang

Publication type:

Conference Paper/Materials

Reduced Expression of TET1, TET2, TET3 and TDG mRNAs Are Associated with Poor Prognosis of Patients with Early Breast Cancer.

Published in:

PLoS ONE, 2015, v. 10, n. 7, p. 1, doi. 10.1371/journal.pone.0133896

By:

Yang, Liu;
Yu, San-Jian;
Hong, Qi;
Yang, Yu;
Shao, Zhi-Ming

Publication type:

Article

A New Family of HEAT-Like Repeat Proteins Lacking a Critical Substrate Recognition Motif Present in Related DNA Glycosylases.

Published in:

PLoS ONE, 2015, v. 10, n. 5, p. 1, doi. 10.1371/journal.pone.0127733

By:

Mullins, Elwood A.;
Shi, Rongxin;
Kotsch, Lyle A.;
Eichman, Brandt F.

Publication type:

Article

Mammalian Base Excision Repair: Functional Partnership between PARP-1 and APE1 in AP-Site Repair.

Published in:

PLoS ONE, 2015, v. 10, n. 5, p. 1, doi. 10.1371/journal.pone.0124269

By:

Prasad, Rajendra;
Dyrkheeva, Nadezhda;
Williams, Jason;
Wilson, Samuel H.

Publication type:

Article

Effect of MPG Gene rs2858056 Polymorphism, Copy Number Variation, and Level of Serum MPG Protein on the Risk for Rheumatoid Arthritis.

Published in:

PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0120699

By:

Huang, Chung-Ming;
Chen, Shih-Yin;
Huang, Po-Hao;
Tsai, Fuu-Jen

Publication type:

Article

Hepatic Oxidative Stress, Genotoxicity and Vascular Dysfunction in Lean or Obese Zucker Rats.

Published in:

PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0118773

By:

Løhr, Mille;
Folkmann, Janne K.;
Sheykhzade, Majid;
Jensen, Lars J.;
Kermanizadeh, Ali;
Loft, Steffen;
Møller, Peter

Publication type:

Article

Repair of Oxidative DNA Base Damage in the Host Genome Influences the HIV Integration Site Sequence Preference.

Published in:

PLoS ONE, 2014, v. 9, n. 7, p. 1, doi. 10.1371/journal.pone.0103164

By:

Bennett, Geoffrey R.;
Peters, Ryan;
Wang, Xiao-hong;
Hanne, Jeungphill;
Sobol, Robert W.;
Bundschuh, Ralf;
Fishel, Richard;
Yoder, Kristine E.

Publication type:

Article

Thermodynamics of the DNA Damage Repair Steps of Human 8-Oxoguanine DNA Glycosylase.

Published in:

PLoS ONE, 2014, v. 9, n. 6, p. 1, doi. 10.1371/journal.pone.0098495

By:

Kuznetsov, Nikita A.;
Kuznetsova, Alexandra A.;
Vorobjev, Yuri N.;
Krasnoperov, Lev N.;
Fedorova, Olga S.

Publication type:

Article

A Mutant of Uracil DNA Glycosylase That Distinguishes between Cytosine and 5-Methylcytosine.

Published in:

PLoS ONE, 2014, v. 9, n. 4, p. 1, doi. 10.1371/journal.pone.0095394

By:

Kimber, Scott T.;
Brown, Tom;
Fox, Keith R.

Publication type:

Article

Accelerated Repair and Reduced Mutagenicity of DNA Damage Induced by Cigarette Smoke in Human Bronchial Cells Transfected with <i>E.coli</i> Formamidopyrimidine DNA Glycosylase.

Published in:

PLoS ONE, 2014, v. 9, n. 1, p. 1, doi. 10.1371/journal.pone.0087984

By:

Foresta, Mara;
Izzotti, Alberto;
La Maestra, Sebastiano;
Micale, Rosanna;
Poggi, Alessandro;
Vecchio, Donatella;
Frosina, Guido

Publication type:

Article

Inhibition of DNA Glycosylases via Small Molecule Purine Analogs.

Published in:

PLoS ONE, 2013, v. 8, n. 12, p. 1, doi. 10.1371/journal.pone.0081667

By:

Jacobs, Aaron C.;
Calkins, Marcus J.;
Jadhav, Ajit;
Dorjsuren, Dorjbal;
Maloney, David;
Simeonov, Anton;
Jaruga, Pawel;
Dizdaroglu, Miral;
McCullough, Amanda K.;
Lloyd, R. Stephen

Publication type:

Article