Works matching DE "DNA contamination"

Results: 57

Ionizing Radiation and Complex DNA Damage: Quantifying the Radiobiological Damage Using Monte Carlo Simulations.

Published in:

Cancers, 2020, v. 12, n. 4, p. 799, doi. 10.3390/cancers12040799

By:

Chatzipapas, Konstantinos P.;
Papadimitroulas, Panagiotis;
Emfietzoglou, Dimitris;
Kalospyros, Spyridon A.;
Hada, Megumi;
Georgakilas, Alexandros G.;
Kagadis, George C.

Publication type:

Article

Contaminating DNA in human saliva alters the detection of variants from whole genome sequencing.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-76022-4

By:

Samson, C. A.;
Whitford, W.;
Snell, R. G.;
Jacobsen, J. C.;
Lehnert, K.

Publication type:

Article

NBTY Signs Agreement with New York Attorney General Regarding DNA Testing of Herbs.

Published in:

HerbalGram, 2016, n. 112, p. 60

By:

Gafner, Stefan

Publication type:

Article

The impact of silica encapsulated cobalt zinc ferrite nanoparticles on DNA, lipids and proteins of rat bone marrow mesenchymal stem cells.

Published in:

Nanotoxicology, 2016, v. 10, n. 6, p. 662, doi. 10.3109/17435390.2015.1107144

By:

Novotna, Bozena;
Turnovcova, Karolina;
Veverka, Pavel;
Rössner, Pavel;
Bagryantseva, Yana;
Herynek, Vit;
Zvatora, Pavel;
Vosmanska, Magda;
Klementova, Mariana;
Sykova, Eva;
Jendelova, Pavla

Publication type:

Article

Insights into an Extensively Fragmented Eukaryotic Genome: De Novo Genome Sequencing of the Multinuclear Ciliate Uroleptopsis citrina.

Published in:

Genome Biology & Evolution, 2018, v. 10, n. 3, p. 883, doi. 10.1093/gbe/evy055

By:

Weibo Zheng;
Chundi Wang;
Ying Yan;
Feng Gao;
Doak, Thomas G.;
Weibo Song

Publication type:

Article

Efficient extraction of small and large RNAs in bacteria for excellent total RNA sequencing and comprehensive transcriptome analysis.

Published in:

BMC Research Notes, 2015, v. 8, p. 1, doi. 10.1186/s13104-015-1726-3

By:

Heera, Rajandas;
Sivachandran, Parimannan;
Chinni, Suresh V.;
Mason, Joanne;
Croft, Larry;
Ravichandran, Manickam;
Lee Su Yin

Publication type:

Article

DNA contamination minimisation – finding an effective cleaning method.

Published in:

Australian Journal of Forensic Sciences, 2015, v. 47, n. 4, p. 428, doi. 10.1080/00450618.2015.1004195

By:

Ballantyne, Kaye N.;
Salemi, Renato;
Guarino, Fabio;
Pearson, James R.;
Garlepp, Dale;
Fowler, Stephen;
van Oorschot, Roland A.H.

Publication type:

Article

Development of a direct blood-based PCR system to detect BLV provirus using CoCoMo primers.

Published in:

Archives of Virology, 2016, v. 161, n. 6, p. 1539, doi. 10.1007/s00705-016-2806-y

By:

Takeshima, Shin-nosuke;
Watanuki, Sonoko;
Ishizaki, Hiroshi;
Matoba, Kazuhiro;
Aida, Yoko

Publication type:

Article

Cabotegravir Extended-Release Injectable Suspension: A Review in HIV-1 Pre-Exposure Prophylaxis.

Published in:

Drugs, 2022, v. 82, n. 14, p. 1489, doi. 10.1007/s40265-022-01791-3

By:

Blair, Hannah A.

Publication type:

Article

EFFECT OF CONTROLLED GLUTARALDEHYDE CROSSLINKING ON IN VITRO STABILITY OF DECELLULARISED BOVINE PERICARDIAL SCAFFOLDS.

Published in:

Journal of Indian Veterinary Association, 2021, v. 19, n. 1, p. 43

By:

P., Suvaneeth;
N. D., Nair;
P. R., Umashankar;
N., Vijayan;
K. D. J., Martin;
J. A., Mammen

Publication type:

Article

A Versatile Panel of Reference Gene Assays for the Measurement of Chicken mRNA by Quantitative PCR.

Published in:

PLoS ONE, 2016, v. 11, n. 8, p. 1, doi. 10.1371/journal.pone.0160173

By:

Staines, Karen;
Batra, Ambalika;
Mwangi, William;
Maier, Helena J.;
Van Borm, Steven;
Young, John R.;
Fife, Mark;
Butter, Colin

Publication type:

Article

A Novel Open Tubular Capillary Electrochromatographic Method for Differentiating the DNA Interaction Affinity of Environmental Contaminants.

Published in:

PLoS ONE, 2016, v. 11, n. 4, p. 1, doi. 10.1371/journal.pone.0153081

By:

D’Ulivo, Lucia;
Feng, Yong-Lai

Publication type:

Article

A fast and accurate method of detecting Aleutian mink disease virus in blood and tissues of chronically infected mink.

Published in:

Canadian Journal of Microbiology, 2017, v. 63, n. 4, p. 341, doi. 10.1139/cjm-2016-0567

By:

Farid, A.H.;
Rupasinghe, P.P.

Publication type:

Article

Quantification and normalization of gene expression using SYBR Green I real-time RT-PCR.

Published in:

2001

By:

Vandesompele, Jo;
Iso-Oja, Johanna;
De Paepe, Anne;
Speleman, Frank

Publication type:

Abstract

A BAYESIAN STATISTICAL ANALYSIS OF THE DNA CONTAMINATION SCENARIO.

Published in:

Jurimetrics: The Journal of Law, Science & Technology, 2018, v. 58, n. 2, p. 211

By:

Wixted, John T.;
Christenfeld, Nicholas J.S.;
Rouder, Jeffrey N.

Publication type:

Article

Contamination Assessment for Cancer Next-Generation Sequencing: Method Development and Clinical Implementation.

Published in:

Archives of Pathology & Laboratory Medicine, 2022, v. 146, n. 2, p. 227, doi. 10.5858/arpa.2020-0679-OA

By:

Li, Yvonne Y.;
Schmidt, Ryan J.;
Manning, Danielle K.;
Yonghui Jia;
Fei Dong

Publication type:

Article

From trash to treasure: detecting unexpected contamination in unmapped NGS data.

Published in:

BMC Bioinformatics, 2019, v. 20, n. 4, p. 1, doi. 10.1186/s12859-019-2684-x

By:

Sangiovanni, Mara;
Granata, Ilaria;
Thind, Amarinder Singh;
Guarracino, Mario Rosario

Publication type:

Article

Circulating Cell-Free DNA and RNA Analysis as Liquid Biopsy: Optimal Centrifugation Protocol.

Published in:

Cancers, 2019, v. 11, n. 4, p. 458, doi. 10.3390/cancers11040458

By:

Sorber, Laure;
Zwaenepoel, Karen;
Jacobs, Julie;
De Winne, Koen;
Goethals, Sofie;
Reclusa, Pablo;
Van Casteren, Kaat;
Augustus, Elien;
Lardon, Filip;
Roeyen, Geert;
Peeters, Marc;
Van Meerbeeck, Jan;
Rolfo, Christian;
Pauwels, Patrick

Publication type:

Article

CFTR Deletion Confers Mitochondrial Dysfunction and Disrupts Lipid Homeostasis in Intestinal Epithelial Cells.

Published in:

Nutrients, 2018, v. 10, n. 7, p. 836, doi. 10.3390/nu10070836

By:

Kleme, Marie L.;
Sané, Alain;
Garofalo, Carole;
Seidman, Ernest;
Brochiero, Emmanuelle;
Berthiaume, Yves;
Levy, Emile

Publication type:

Article

Inherent bacterial DNA contamination of extraction and sequencing reagents may affect interpretation of microbiota in low bacterial biomass samples.

Published in:

Gut Pathogens, 2016, v. 8, p. 1, doi. 10.1186/s13099-016-0103-7

By:

Glassing, Angela;
Dowd, Scot E.;
Galandiuk, Susan;
Davis, Brian;
Chiodini, Rodrick J.

Publication type:

Article

Cost-effective in-house COVID-19 reverse transcription-polymerase chain reaction testing with yeast-derived Taq polymerase.

Published in:

Annals of Thoracic Medicine, 2024, v. 19, n. 2, p. 165, doi. 10.4103/atm.atm_180_23

By:

Zhra, Mahmoud;
Al Saud, Aljohara;
Alzayer, Maha;
Okdah, Liliane;
Tamim, Hani;
Fakhoury, Hana M. A.;
Aljada, Ahmad

Publication type:

Article

Microbiology: Beware tainted microbe studies.

Published in:: Nature, 2014, v. 515, n. 7527, p. 315, doi. 10.1038/515315b
Publication type:: Article

EFFECT OF STORAGE TIME ON DNA CONTENT AND PURITY IN LIP PRINT.

Published in:

Jurnal Biosains Pascasarjana, 2023, v. 25, n. 1, p. 43, doi. 10.20473/jbp.v25i1.2023.43-48

By:

Erliyah, Titik;
Yudianto, Ahmad;
Furqoni, Abdul Hadi;
Nuraini, Indah;
Huda, Qurrota A'yunil

Publication type:

Article

MLuq Protocol: A Proposal for the Immobilization of the White Weapon, Preservation of DNA Traces, and Its Chain of Custody.

Published in:

Healthcare (2227-9032), 2023, v. 11, n. 11, p. 1573, doi. 10.3390/healthcare11111573

By:

Luque-Oliveros, Manuel;
Martínez-Flores, Salvador;
Morilla-Romero-de-la-Osa, Rubén

Publication type:

Article

A Novel System Control for Quality Control of Diagnostic Tests Based on Next-Generation Sequencing.

Published in:

Journal of Applied Laboratory Medicine, 2016, p. 25, doi. 10.1373/jalm.2016.020131

By:

Chan, Maurice;
Smirnov, Arseny;
Mulawadi, Fabianus;
Lim, Priscilla;
Wen-Huey Lim;
See Ting Leong;
Hwee Meng Low;
Mei Qi Yee;
Yong Qiang Yeo;
Xin Zhou;
Lee, Charlie;
Wen Huang;
Welebob, Louis;
Mengchu Wu

Publication type:

Article

Human evolution: Making the most of damage.

Published in:

Nature Reviews Genetics, 2014, v. 15, n. 10, p. 642, doi. 10.1038/nrg3814

By:

Burgess, Darren J.

Publication type:

Article

A Simple RFLP-Based Method for HFE Gene Multiplex Amplification and Determination of Hereditary Hemochromatosis-Causing Mutation C282Y and H63D Variant with Highly Sensitive Determination of Contamination.

Published in:

BioMed Research International, 2020, p. 1, doi. 10.1155/2020/9396318

By:

OGOUMA-AWORET, Ludmilla;
RABES, Jean-Pierre;
de MAZANCOURT, Philippe

Publication type:

Article

Assessing the Risk of Secondary Transfer Via Fingerprint Brush Contamination Using Enhanced Sensitivity DNA Analysis Methods.

Published in:

Journal of Forensic Sciences, 2016, v. 61, n. 1, p. 204, doi. 10.1111/1556-4029.12911

By:

Bolivar, Paula‐Andrea;
Tracey, Martin;
McCord, Bruce

Publication type:

Article

Prevalence of maternal cell contamination in amniotic fluid samples.

Published in:

2017

By:

Weida, Jennifer;
Patil, Avinash S.;
Schubert, Frank P.;
Vance, Gail;
Drendel, Holli;
Reese, Angela;
Dlouhy, Stephen;
Bai, Shaochun;
Lee, Men-Jean

Publication type:

journal article

Inference and visualization of DNA damage patterns using a grade of membership model.

Published in:

Bioinformatics, 2019, v. 35, n. 8, p. 1292, doi. 10.1093/bioinformatics/bty779

By:

Al-Asadi, Hussein;
Dey, Kushal K;
Novembre, John;
Stephens, Matthew

Publication type:

Article

Strategies for avoiding amplicon contamination in the molecular laboratory.

Published in:

Medical Laboratory Observer (MLO), 2018, v. 50, n. 2, p. 36

By:

Brunstein, John

Publication type:

Article

Identification of Streptococcus parasanguinis DNA contamination in human buccal DNA samples.

Published in:

BMC Research Notes, 2013, v. 6, n. 1, p. 1, doi. 10.1186/1756-0500-6-481

By:

Mahfuz, Istiak;
Wei Cheng;
White, Stefan J.

Publication type:

Article

Lack of evidence for retroviral infections formerly related to chronic fatigue in Spanish Fibromyalgia patients.

Published in:

Virology Journal, 2013, v. 10, n. 1, p. 1, doi. 10.1186/1743-422X-10-332

By:

Oltra, Elisa;
García-Escudero, María;
Mena-Durán, Armando Vicente;
Monsalve, Vicente;
Cerdá-Olmedo, Germán

Publication type:

Article

Triplex DNA: A new platform for polymerase chain reaction - based biosensor.

Published in:

Scientific Reports, 2015, p. 13010, doi. 10.1038/srep13010

By:

Li, Yubin;
Miao, Xiangmin;
Ling, Liansheng

Publication type:

Article

Presence of Bacteria in Spontaneous Achilles Tendon Ruptures.

Published in:

American Journal of Sports Medicine, 2017, v. 45, n. 9, p. 2061, doi. 10.1177/0363546517696315

By:

Rolf, Christer G.;
Fu, Sai-Chuen;
Hopkins, Chelsea;
Yung, Shu-Hang;
Chan, Kai-Ming;
Luan, Ju;
Qin, Ling;
Ip, Margaret;
Friman, Göran

Publication type:

Article

Monodisperse Picoliter Droplets for Low-Bias and Contamination-Free Reactions in Single-Cell Whole Genome Amplification.

Published in:

PLoS ONE, 2015, v. 10, n. 9, p. 1, doi. 10.1371/journal.pone.0138733

By:

Nishikawa, Yohei;
Hosokawa, Masahito;
Maruyama, Toru;
Yamagishi, Keisuke;
Mori, Tetsushi;
Takeyama, Haruko

Publication type:

Article

Removal of Contaminant DNA by Combined UV-EMA Treatment Allows Low Copy Number Detection of Clinically Relevant Bacteria Using Pan-Bacterial Real-Time PCR.

Published in:

PLoS ONE, 2015, v. 10, n. 7, p. 1, doi. 10.1371/journal.pone.0132954

By:

Humphrey, Bruce;
McLeod, Neil;
Turner, Carrie;
Sutton, J. Mark;
Dark, Paul M.;
Warhurst, Geoffrey

Publication type:

Article

Plasmodium knowlesi Genome Sequences from Clinical Isolates Reveal Extensive Genomic Dimorphism.

Published in:

PLoS ONE, 2015, v. 10, n. 4, p. 1, doi. 10.1371/journal.pone.0121303

By:

Pinheiro, Miguel M.;
Ahmed, Md Atique;
Millar, Scott B.;
Sanderson, Theo;
Otto, Thomas D.;
Lu, Woon Chan;
Krishna, Sanjeev;
Rayner, Julian C.;
Cox-Singh, Janet

Publication type:

Article

3′ IsomiR Species and DNA Contamination Influence Reliable Quantification of MicroRNAs by Stem-Loop Quantitative PCR.

Published in:

PLoS ONE, 2014, v. 9, n. 8, p. 1, doi. 10.1371/journal.pone.0106315

By:

Schamberger, Anita;
Orbán, Tamás I.

Publication type:

Article

Detection of Nicotiana DNA in Tobacco Products Using a Novel Multiplex Real-Time PCR Assay.

Published in:

Journal of AOAC International, 2016, v. 99, n. 4, p. 1038, doi. 10.5740/jaoacint.16-0008

By:

KORCHINSKI, KATIE L.;
LAND, ADRIAN D.;
CRAFT, DAVID L.;
BRZEZINSKI, JENNIFER L.

Publication type:

Article

Studying the microbiome and its complexities: an interview with Alan Walker.

Published in:

BMC Biology, 2018, v. 16, n. 1, p. 1, doi. 10.1186/s12915-018-0599-z

By:

Walker, Alan W.

Publication type:

Article

Small RNA profiling of low biomass samples: identification and removal of contaminants.

Published in:

BMC Biology, 2018, v. 16, n. 1, p. 1, doi. 10.1186/s12915-018-0522-7

By:

Heintz-Buschart, Anna;
Yusuf, Dilmurat;
Kaysen, Anne;
Etheridge, Alton;
Fritz, Joëlle V.;
May, Patrick;
de Beaufort, Carine;
Upadhyaya, Bimal B.;
Ghosal, Anubrata;
Galas, David J.;
Wilmes, Paul

Publication type:

Article

SeqPurge: highly-sensitive adapter trimming for paired-end NGS data.

Published in:

BMC Bioinformatics, 2016, v. 17, p. 1, doi. 10.1186/s12859-016-1069-7

By:

Sturm, Marc;
Schroeder, Christopher;
Bauer, Peter

Publication type:

Article

Joint Estimation of Contamination, Error and Demography for Nuclear DNA from Ancient Humans.

Published in:

PLoS Genetics, 2016, v. 12, n. 4, p. 1, doi. 10.1371/journal.pgen.1005972

By:

Racimo, Fernando;
Renaud, Gabriel;
Slatkin, Montgomery

Publication type:

Article

High-Level Production of DNA-Specific Endonuclease AsEndI with Synonymous Codon and its Potential Utilization for Removing DNA Contamination.

Published in:

Applied Biochemistry & Biotechnology, 2018, v. 185, n. 3, p. 641, doi. 10.1007/s12010-017-2672-4

By:

Wang, Yuan;
Jia, Peng;
Sharif, Rahat;
Li, Zhengchen;
Li, Yuhong;
Chen, Peng

Publication type:

Article

Genetic analyses of herbarium material: Is more care required?

Published in:

Taxon, 2014, v. 63, n. 5, p. 972, doi. 10.12705/635.2

By:

Shepherd, Lara;
Perrie, Leon

Publication type:

Article

Intrinsic muscle clock is necessary for musculoskeletal health.

Published in:

Journal of Physiology, 2015, v. 593, n. 24, p. 5387, doi. 10.1113/JP271436

By:

Schroder, Elizabeth A.;
Harfmann, Brianna D.;
Zhang, Xiping;
Srikuea, Ratchakrit;
England, Jonathan H.;
Hodge, Brian A.;
Wen, Yuan;
Riley, Lance A.;
Yu, Qi;
Christie, Alexander;
Smith, Jeffrey D.;
Seward, Tanya;
Wolf Horrell, Erin M.;
Mula, Jyothi;
Peterson, Charlotte A.;
Butterfield, Timothy A.;
Esser, Karyn A.

Publication type:

Article

Characterization and recovery of the halophiles in the fluid inclusions in halite.

Published in:

Acta Geologica Sinica (English Edition), 2014, v. 88, p. 71, doi. 10.1111/1755-6724.12266_14

By:

HU, Bin;
KONG, Fanjing

Publication type:

Article

Human papillomavirus is not associated to non-small cell lung cancer: data from a prospective cross-sectional study.

Published in:

Infectious Agents & Cancer, 2019, v. 14, n. 1, p. N.PAG, doi. 10.1186/s13027-019-0235-8

By:

Silva, Estela Maria;
Mariano, Vânia Sammartino;
Pastrez, Paula Roberta Aguiar;
Pinto, Miguel Cordoba;
Nunes, Emily Montosa;
Sichero, Laura;
Villa, Luisa Lina;
Scapulatempo-Neto, Cristovam;
Syrjanen, Kari Juhani;
Longatto-Filho, Adhemar

Publication type:

Article

Effects of pH, conductivity, host cell protein, and DNA size distribution on DNA clearance in anion exchange chromatography media.

Published in:

Biotechnology Progress, 2018, v. 34, n. 1, p. 141, doi. 10.1002/btpr.2556

By:

Stone, Melani C.;
Borman, Jon;
Ferreira, Gisela;
Robbins, P. David

Publication type:

Article