Works matching DE "DESULFOVIBRIO vulgaris"

Results: 46

Subcellular Localization of Proteins in the Anaerobic Sulfate Reducer Desulfovibrio vulgaris via SNAP-tag Labeling and Photoconversion.

Published in:

2010

By:

Gorur, A.;
Leung, C. M.;
Jorgens, D.;
Tauscher, A.;
Remis, J. P.;
Ball, D. A.;
Chhabra, S.;
Fok, V.;
Gelle, J. T.;
Singer, M.;
Hazen, T. C.;
Juba, T.;
Elias, D.;
Wall, J.;
Biggin, M.;
Downing, K. H.;
Auer, M.

Publication type:

Abstract

Electron transfer pathways of formate-driven H production in Desulfovibrio.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 18, p. 8135, doi. 10.1007/s00253-016-7649-7

By:

Martins, Mónica;
Mourato, Cláudia;
Morais-Silva, Fabio;
Rodrigues-Pousada, Claudina;
Voordouw, Gerrit;
Wall, Judy;
Pereira, Inês

Publication type:

Article

Analysis of the microbial community of the biocathode of a hydrogen-producing microbial electrolysis cell.

Published in:

Applied Microbiology & Biotechnology, 2011, v. 92, n. 5, p. 1083, doi. 10.1007/s00253-011-3583-x

By:

Croese, Elsemiek;
Pereira, Maria;
Euverink, Gert-Jan;
Stams, Alfons;
Geelhoed, Jeanine

Publication type:

Article

Desulfovibrio desulfuricans PglB homolog possesses oligosaccharyltransferase activity with relaxed glycan specificity and distinct protein acceptor sequence requirements†.

Published in:

Glycobiology, 2011, v. 21, n. 6, p. 734, doi. 10.1093/glycob/cwq192

By:

Ielmini, Maria V;
Feldman, Mario F

Publication type:

Article

Single-cell analysis reveals gene-expression heterogeneity in syntrophic dual-culture of Desulfovibrio vulgaris with Methanosarcina barkeri.

Published in:

Scientific Reports, 2014, p. 1, doi. 10.1038/srep07478

By:

Zhenhua Qi;
Guangsheng Pei;
Lei Chen;
Weiwen Zhang

Publication type:

Article

Complex Dielectric Properties of Sulfate-Reducing Bacteria Suspensions.

Published in:

Geomicrobiology Journal, 2013, v. 30, n. 6, p. 490, doi. 10.1080/01490451.2012.719997

By:

Zhang, Chi;
Slater, Lee;
Prodan, Camelia

Publication type:

Article

Impact of Biocides on Hydrogen Sulfide Production and Growth of Desulfovibrio v ulgaris.

Published in:

CLEAN: Soil, Air, Water, 2016, v. 44, n. 10, p. 1423, doi. 10.1002/clen.201501003

By:

Ben‐Dov, Eitan;
Zisman, Ofir;
Brenner, Asher;
Kushmaro, Ariel

Publication type:

Article

Purification and Characterization of Homo- and Hetero-Dimeric Acetate Kinases from the Sulfate-Reducing Bacterium Desulfovibrio vulgaris1.

Published in:

Journal of Biochemistry, 2001, v. 129, n. 3, p. 411

By:

Yu, Ling;
Ishida, Tetsuo;
Ozawa, Kiyoshi;
Akutsu, Hideo;
Horiike, Kihachiro

Publication type:

Article

Cloning and Expression of the Catalase Gene from the Anaerobic Bacterium Desulfovibrio vulgaris (Miyazaki F)1.

Published in:

Journal of Biochemistry, 2001, v. 129, n. 3, p. 357, doi. 10.1093/oxfordjournals.jbchem.a002865

By:

Kitamura, Masaya;
Nakanishi, Takeshi;
Kojima, Shuichi;
Kumagai, Izumi;
Inoue, Hideo

Publication type:

Article

Structure analysis of the flavoredoxin from Desulfovibrio vulgaris Miyazaki F reveals key residues that discriminate the functions and properties of the flavin reductase family.

Published in:

FEBS Journal, 2009, v. 276, n. 17, p. 4840, doi. 10.1111/j.1742-4658.2009.07184.x

By:

Shibata, Naoki;
Ueda, Yasufumi;
Takeuchi, Daisuke;
Haruyama, Yoshihiro;
Kojima, Shuichi;
Sato, Junichi;
Niimura, Youichi;
Kitamura, Masaya;
Higuchi, Yoshiki

Publication type:

Article

Mutualistic growth of the sulfate-reducer Desulfovibrio vulgaris Hildenborough with different carbohydrates.

Published in:

Microbiology (00262617), 2012, v. 81, n. 6, p. 663, doi. 10.1134/S002626171206015X

By:

Santana, M.;
Portillo, M.;
Gonzalez, J.

Publication type:

Article

Investigation of the trophic relations between anaerobic microorganisms from an underground gas repository during methanol utilization.

Published in:

Microbiology (00262617), 2011, v. 80, n. 2, p. 180, doi. 10.1134/S0026261711020159

By:

Tarasov, A. L.;
Borzenkov, I. A.;
Belyayev, S. S.

Publication type:

Article

Activity of nitrate reductase in Desulfovibrio vulgaris VKM 1388.

Published in:

Microbiology (00262617), 2009, v. 78, n. 2, p. 160, doi. 10.1134/S0026261709020040

By:

Tarasova, N.;
Gorshkov, O.;
Petrova, O.

Publication type:

Article

Contribution of mobile genetic elements to Desulfovibrio vulgaris genome plasticity.

Published in:

Environmental Microbiology, 2009, v. 11, n. 9, p. 2244, doi. 10.1111/j.1462-2920.2009.01946.x

By:

Walker, Christopher B.;
Stolyar, Sergey;
Chivian, Dylan;
Pinel, Nicolas;
Gabster, Jeffrey A.;
Dehal, Paramvir S.;
Zhili He;
Zamin Koo Yang;
Yen, Huei-Che B.;
Jizhong Zhou;
Wall, Judy D.;
Hazen, Terry C.;
Arkin, Adam P.;
Stahl, David A.

Publication type:

Article

A genomic island of the sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough promotes survival under stress conditions while decreasing the efficiency of anaerobic growth.

Published in:

Environmental Microbiology, 2009, v. 11, n. 4, p. 981, doi. 10.1111/j.1462-2920.2008.01823.x

By:

Johnston, Shawna;
Lin, Shiping;
Lee, Phoebe;
Caffrey, Sean M.;
Wildschut, Janine;
Voordouw, Johanna K.;
da Silva, Sofia M.;
Pereira, Ines A. C.;
Voordouw, Gerrit

Publication type:

Article

BIOREMOVAL 0F SULPHATE LAYER FROM A 15TH CENTURY POLYCHROME MARBLE ARTIFACT.

Published in:

Conservation Science in Cultural Heritage / Quaderni di Scienza della Conservazione, 2015, v. 15, p. 235

By:

Martino, Manuela;
Schiavone, Salvo;
Palla, Franco;
Pellegrino, Lorella;
De Castro, Evelina;
Balloi, Annalisa

Publication type:

Article

Biochemical Function, Molecular Structure and Evolution of an Atypical Thioredoxin Reductase from Desulfovibrio vulgaris.

Published in:

Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01855

By:

Valette, Odile;
Tran, Tam T. T.;
Cavazza, Christine;
Caudeville, Elodie;
Brasseur, Gaël;
Dolla, Alain;
Talla, Emmanuel;
Pieulle, Laetitia

Publication type:

Article

Glyceryl trinitrate and caprylic acid for the mitigation of the Desulfovibrio vulgaris biofilm on C1018 carbon steel.

Published in:

World Journal of Microbiology & Biotechnology, 2016, v. 32, n. 2, p. 1, doi. 10.1007/s11274-015-1968-1

By:

Li, Y.;
Zhang, P.;
Cai, W.;
Rosenblatt, J.;
Raad, I.;
Xu, D.;
Gu, T.

Publication type:

Article

On hydrolysis of cellulose and nitrocellulose under sulfate-reducing conditions.

Published in:

World Journal of Microbiology & Biotechnology, 2010, v. 26, n. 1, p. 189, doi. 10.1007/s11274-009-0156-6

By:

O. Petrova;
N. Tarasova;
M. Davydova

Publication type:

Article

D-Methionine as a biofilm dispersal signaling molecule enhanced tetrakis hydroxymethyl phosphonium sulfate mitigation of Desulfovibrio vulgaris biofilm and biocorrosion pitting.

Published in:

Materials & Corrosion / Werkstoffe und Korrosion, 2014, v. 65, n. 8, p. 837, doi. 10.1002/maco.201206894

By:

Xu, D.;
Li, Y.;
Gu, T.

Publication type:

Article

Biofilm growth mode promotes maximum carrying capacity and community stability during product inhibition syntrophy.

Published in:

Frontiers in Microbiology, 2014, v. 5, p. 1, doi. 10.3389/fmicb.2014.00693

By:

Brileya, Kristen A.;
Camilleri, Laura B.;
Zane, Grant M.;
Wall, Judy D.;
Fields, Matthew W.

Publication type:

Article

CO2 exposure at pressure impacts metabolism and stress responses in the model sulfate-reducing bacterium Desulfovibrio vulgaris strain Hildenborough.

Published in:

Frontiers in Microbiology, 2014, v. 5, p. 1, doi. 10.3389/fmicb.2014.00507

By:

Marshall, Matthew J.;
Alderson, Paul A.;
Plymale, Andrew E.;
Tucker, Abby E.;
Wilkins, Michael J.;
Hoyt, David W.;
Meng Markillie, L.;
Walter, Eric D.;
Linggi, Bryan E.;
Dohnalkova, Alice C.;
Taylor, Ron C.

Publication type:

Article

PCR-DGGE and real-time PCR dsrB-based study of the impact of heavy metals on the diversity and abundance of sulfate-reducing bacteria.

Published in:

Biotechnology & Bioprocess Engineering, 2014, v. 19, n. 4, p. 703, doi. 10.1007/s12257-014-0324-x

By:

Islamud-Din;
Hesham, Abd;
Ahmad, Ayaz;
Daqiang, Cang;
Khan, Sardar

Publication type:

Article

Constraint‐based modelling captures the metabolic versatility of <italic>Desulfovibrio vulgaris</italic>.

Published in:

Environmental Microbiology Reports, 2018, v. 10, n. 2, p. 190, doi. 10.1111/1758-2229.12619

By:

Flowers, Jason J.;
Richards, Matthew A.;
Baliga, Nitin;
Meyer, Birte;
Stahl, David A.

Publication type:

Article

Strategy for microbiome analysis using 16S rRNA gene sequence analysis on the Illumina sequencing platform.

Published in:

Systems Biology in Reproductive Medicine, 2011, v. 57, n. 3, p. 162, doi. 10.3109/19396368.2011.555598

By:

Ram, Jeffrey L.;
Karim, Aos S.;
Sendler, Edward D.;
Kato, Ikuko

Publication type:

Article

Cloning and Expression of the MutM Gene from Obligate Anaerobic Bacterium Desulfovibrio vulgaris (Miyazaki F)*.

Published in:

Journal of Biochemistry, 2009, v. 145, n. 4, p. 525, doi. 10.1093/jb/mvp005

By:

Sanada, Hideaki;
Nakanishi, Takeshi;
Inoue, Hideo;
Kitamura, Masaya

Publication type:

Article

Rapid selective sweep of pre-existing polymorphisms and slow fixation of new mutations in experimental evolution of Desulfovibrio vulgaris.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2015, v. 9, n. 11, p. 2360, doi. 10.1038/ismej.2015.45

By:

Zhou, Aifen;
Hillesland, Kristina L;
He, Zhili;
Schackwitz, Wendy;
Tu, Qichao;
Zane, Grant M;
Ma, Qiao;
Qu, Yuanyuan;
Stahl, David A;
Wall, Judy D;
Hazen, Terry C;
Fields, Matthew W;
Arkin, Adam P;
Zhou, Jizhong

Publication type:

Article

Characterization of NaCl tolerance in Desulfovibrio vulgaris Hildenborough through experimental evolution.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 9, p. 1790, doi. 10.1038/ismej.2013.60

By:

Zhou, Aifen;
Baidoo, Edward;
He, Zhili;
Mukhopadhyay, Aindrila;
Baumohl, Jason K;
Benke, Peter;
Joachimiak, Marcin P;
Xie, Ming;
Song, Rong;
Arkin, Adam P;
Hazen, Terry C;
Keasling, Jay D;
Wall, Judy D;
Stahl, David A;
Zhou, Jizhong

Publication type:

Article

Sustainable syntrophic growth of Dehalococcoides ethenogenes strain 195 with Desulfovibrio vulgaris Hildenborough and Methanobacterium congolense: global transcriptomic and proteomic analyses.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 2, p. 410, doi. 10.1038/ismej.2011.111

By:

Men, Yujie;
Feil, Helene;
VerBerkmoes, Nathan C;
Shah, Manesh B;
Johnson, David R;
Lee, Patrick K H;
West, Kimberlee A;
Zinder, Stephen H;
Andersen, Gary L;
Alvarez-Cohen, Lisa

Publication type:

Article

Impact of elevated nitrate on sulfate-reducing bacteria: a comparative Study of Desulfovibrio vulgaris.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2010, v. 4, n. 11, p. 1386, doi. 10.1038/ismej.2010.59

By:

Qiang He;
Zhili He;
Joyner, Dominique C.;
Joachimiak, Marcin;
Price, Morgan N.;
Yang, Zamin K.;
Huei-Che Bill Yen;
Hemme, Christopher L.;
Wenqiong Chen;
Fields, Matthew W.;
Stahl, David A.;
Keasling, Jay D.;
Keller, Martin;
Arkin, Adam P.;
Hazen, Terry C.;
Wall, Judy D.;
Jizhong Zhou

Publication type:

Article

Transcriptomic and proteomic analyses of Desulfovibrio vulgaris biofilms: Carbon and energy flow contribute to the distinct biofilm growth state.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 138, doi. 10.1186/1471-2164-13-138

By:

Clark, Melinda E.;
Zhili He;
Redding, Alyssa M.;
Joachimiak, Marcin P.;
Keasling, Jay D.;
Jizhong Z. Zhou;
Arkin, Adam P.;
Mukhopadhyay, Aindrila;
Fields, Matthew W.

Publication type:

Article

O2 Inhibition of Ni-Containing CO Dehydrogenase Is Partly Reversible.

Published in:

Chemistry - A European Journal, 2015, v. 21, n. 52, p. 18934, doi. 10.1002/chem.201502835

By:

Merrouch, Meriem;
Hadj-Saïd, Jessica;
Domnik, Lilith;
Dobbek, Holger;
Léger, Christophe;
Dementin, Sébastien;
Fourmond, Vincent

Publication type:

Article

Surface display of highly-stable Desulfovibrio vulgaris carbonic anhydrase on polyester beads for CO capture.

Published in:

Biotechnology Letters, 2015, v. 37, n. 7, p. 1415, doi. 10.1007/s10529-015-1803-7

By:

Hooks, David;
Rehm, Bernd

Publication type:

Article

Mechanism for microbial population collapse in a fluctuating resource environment.

Published in:

Molecular Systems Biology, 2017, v. 13, n. 3, p. n/a, doi. 10.15252/msb.20167058

By:

Turkarslan, Serdar;
Raman, Arjun V;
Thompson, Anne W;
Arens, Christina E;
Gillespie, Mark A;
Netzer, Frederick;
Hillesland, Kristina L;
Stolyar, Sergey;
López García de Lomana, Adrian;
Reiss, David J;
Gorman‐Lewis, Drew;
Zane, Grant M;
Ranish, Jeffrey A;
Wall, Judy D;
Stahl, David A;
Baliga, Nitin S

Publication type:

Article

Prediction and Characterization ofMissing Proteomic Data in Desulfovibrio vulgaris.

Published in:

Comparative & Functional Genomics, 2011, p. 1, doi. 10.1155/2011/780973

By:

Feng Li;
Lei Nie;
Gang Wu;
Jianjun Qiao;
Weiwen Zhang

Publication type:

Article

Extracellular Electron Transfer Is a Bottleneck in the Microbiologically Influenced Corrosion of C1018 Carbon Steel by the Biofilm of Sulfate-Reducing Bacterium Desulfovibrio vulgaris.

Published in:

PLoS ONE, 2015, v. 10, n. 8, p. 1, doi. 10.1371/journal.pone.0136183

By:

Li, Huabing;
Xu, Dake;
Li, Yingchao;
Feng, Hao;
Liu, Zhiyong;
Li, Xiaogang;
Gu, Tingyue;
Yang, Ke

Publication type:

Article

Growth of the Obligate Anaerobe Desulfovibrio vulgaris Hildenborough under Continuous Low Oxygen Concentration Sparging: Impact of the Membrane-Bound Oxygen Reductases.

Published in:

PLoS ONE, 2015, v. 10, n. 4, p. 1, doi. 10.1371/journal.pone.0123455

By:

Ramel, Fanny;
Brasseur, Gael;
Pieulle, Laetitia;
Valette, Odile;
Hirschler-Réa, Agnès;
Fardeau, Marie Laure;
Dolla, Alain

Publication type:

Article

Towards a Rigorous Network of Protein-Protein Interactions of the Model Sulfate Reducer Desulfovibrio vulgaris Hildenborough.

Published in:

PLoS ONE, 2011, v. 6, n. 6, p. 1, doi. 10.1371/journal.pone.0021470

By:

Chhabra, Swapnil R.;
Joachimiak, Marcin P.;
Petzold, Christopher J.;
Zane, Grant M.;
Price, Morgan N.;
Reveco, Sonia A.;
Fok, Veronica;
Johanson, Alyssa R.;
Batth, Tanveer S.;
Singer, Mary;
Chandonia, John-Marc;
Joyner, Dominique;
Hazen, Terry C.;
Arkin, Adam P.;
Wall, Judy D.;
Singh, Anup K.;
Keasling, Jay D.

Publication type:

Article

Oxygen exposure increases resistance of Desulfovibrio vulgaris Hildenborough to killing by hydrogen peroxide.

Published in:

Antonie van Leeuwenhoek, 2012, v. 101, n. 2, p. 303, doi. 10.1007/s10482-011-9634-6

By:

Wildschut, Janine;
Caffrey, Sean;
Voordouw, Johanna;
Voordouw, Gerrit

Publication type:

Article

Effect of sulfide on growth physiology and gene expression of Desulfovibrio vulgaris Hildenborough.

Published in:

Antonie van Leeuwenhoek, 2010, v. 97, n. 1, p. 11, doi. 10.1007/s10482-009-9383-y

By:

Sean Caffrey;
Gerrit Voordouw

Publication type:

Article

Crystal structure of a bacterial homologue of the kidney urea transporter.

Published in:

Nature, 2009, v. 462, n. 7274, p. 757, doi. 10.1038/nature08558

By:

Levin, Elena J.;
Quick, Matthias;
Ming Zhou

Publication type:

Article

Direct Comparison of the Performance of a Bio-inspired Synthetic Nickel Catalyst and a [NiFe]-Hydrogenase, Both Covalently Attached to Electrodes.

Published in:

Angewandte Chemie International Edition, 2015, v. 54, n. 42, p. 12303, doi. 10.1002/anie.201502364

By:

Rodriguez-Maciá, Patricia;
Dutta, Arnab;
Lubitz, Wolfgang;
Shaw, Wendy J.;
Rüdiger, Olaf

Publication type:

Article

Filling gaps in bacterial amino acid biosynthesis pathways with high-throughput genetics.

Published in:

PLoS Genetics, 2018, v. 14, n. 1, p. 1, doi. 10.1371/journal.pgen.1007147

By:

Price, Morgan N.;
Zane, Grant M.;
Kuehl, Jennifer V.;
Melnyk, Ryan A.;
Wall, Judy D.;
Deutschbauer, Adam M.;
Arkin, Adam P.

Publication type:

Article

Interaction of the active site of the Ni-Fe-Se hydrogenase from Desulfovibrio vulgaris Hildenborough with carbon monoxide and oxygen inhibitors.

Published in:

Journal of Biological Inorganic Chemistry (JBIC), 2010, v. 15, n. 8, p. 1285, doi. 10.1007/s00775-010-0686-2

By:

Gutiérrez-Sánchez, Cristina;
Rüdiger, Olaf;
Fernández, Víctor;
Lacey, Antonio;
Marques, Marta;
Pereira, Inês

Publication type:

Article

An NMR structural study of nickel-substituted rubredoxin.

Published in:

Journal of Biological Inorganic Chemistry (JBIC), 2010, v. 15, n. 3, p. 409, doi. 10.1007/s00775-009-0613-6

By:

Goodfellow, Brian J.;
Duarte, Iven C. N.;
Macedo, Anjos L.;
Volkman, Brian F.;
Nunes, Sofia G.;
Moura, I.;
Markley, John L.;
Moura, José J. G.

Publication type:

Article

Probing intermediates in the activation cycle of [NiFe] hydrogenase by infrared spectroscopy: the Ni-SIr state and its light sensitivity.

Published in:

Journal of Biological Inorganic Chemistry (JBIC), 2009, v. 14, n. 8, p. 1227, doi. 10.1007/s00775-009-0566-9

By:

Pandelia, Maria-Eirini;
Ogata, Hideaki;
Currell, Leslie J.;
Flores, Marco;
Lubitz, Wolfgang

Publication type:

Article