Works matching DE "DEADENYLATION"

Results: 59

Pat1 proteins: regulating mRNAs from birth to death?

Published in:

Biomolecular Concepts, 2012, v. 3, n. 4, p. 295, doi. 10.1515/bmc-2012-0005

By:

Standart, Nancy;
Marnef, Aline

Publication type:

Article

Quantitative duplex real-time polymerase chain reaction assay with TaqMan probe detects and quantifies Crocodylus porosus in food chain and traditional medicines.

Published in:

Food Additives & Contaminants. Part A: Chemistry, Analysis, Control, Exposure & Risk Assessment, 2019, v. 36, n. 6, p. 825, doi. 10.1080/19440049.2019.1584407

By:

Ahmad Nizar, Nina Naquiah;
Hossain, Motalib;
Sultana, Sharmin;
Ahamad, Mohamad Nasiruddin;
Johan, Mohd Rafie;
Ali, Md. Eaqub

Publication type:

Article

Pachytene piRNAs instruct massive mRNA elimination during late spermiogenesis.

Published in:

Cell Research, 2014, v. 24, n. 6, p. 680, doi. 10.1038/cr.2014.41

By:

Gou, Lan-Tao;
Dai, Peng;
Yang, Jian-Hua;
Xue, Yuanchao;
Hu, Yun-Ping;
Zhou, Yu;
Kang, Jun-Yan;
Wang, Xin;
Li, Hairi;
Hua, Min-Min;
Zhao, Shuang;
Hu, Si-Da;
Wu, Li-Gang;
Shi, Hui-Juan;
Li, Yong;
Fu, Xiang-Dong;
Qu, Liang-Hu;
Wang, En-Duo;
Liu, Mo-Fang

Publication type:

Article

PAN-orama: three convergent views of a eukaryotic deadenylase.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 7, p. 577, doi. 10.1038/nsmb.2850

By:

Martin, Sophie;
Coller, Jeff

Publication type:

Article

An asymmetric PAN3 dimer recruits a single PAN2 exonuclease to mediate mRNA deadenylation and decay.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 7, p. 599, doi. 10.1038/nsmb.2837

By:

Jonas, Stefanie;
Christie, Mary;
Peter, Daniel;
Bhandari, Dipankar;
Loh, Belinda;
Huntzinger, Eric;
Weichenrieder, Oliver;
Izaurralde, Elisa

Publication type:

Article

The structure of the Pan2-Pan3 core complex reveals cross-talk between deadenylase and pseudokinase.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 7, p. 591, doi. 10.1038/nsmb.2834

By:

Schäfer, Ingmar B;
Rode, Michaela;
Bonneau, Fabien;
Schüssler, Steffen;
Conti, Elena

Publication type:

Article

Structural basis for the recruitment of the human CCR4-NOT deadenylase complex by tristetraprolin.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 6, p. 735, doi. 10.1038/nsmb.2572

By:

Fabian, Marc R;
Frank, Filipp;
Rouya, Christopher;
Siddiqui, Nadeem;
Lai, Wi S;
Karetnikov, Alexey;
Blackshear, Perry J;
Nagar, Bhushan;
Sonenberg, Nahum

Publication type:

Article

PABP and the poly(A) tail augment microRNA repression by facilitated miRISC binding.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 6, p. 603, doi. 10.1038/nsmb.2309

By:

Moretti, Francesca;
Kaiser, Constanze;
Zdanowicz-Specht, Agnieszka;
Hentze, Matthias W

Publication type:

Article

Ciphers and Executioners: How 3′-Untranslated Regions Determine the Fate of Messenger RNAs.

Published in:

Frontiers in Genetics, 2019, p. N.PAG, doi. 10.3389/fgene.2019.00006

By:

Mayya, Vinay K.;
Duchaine, Thomas F.

Publication type:

Article

Single-molecule modeling of mRNA degradation by miRNA: Lessons from data.

Published in:

BMC Systems Biology, 2015, v. 9 Suppl 3, p. 1, doi. 10.1186/1752-0509-9-S3-S2

By:

Sin, Celine;
Chiarugi, Davide;
Valleriani, Angelo

Publication type:

Article

A genome-wide survey of maternal and embryonic transcripts during Xenopus tropicalis development.

Published in:

BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-762

By:

Paranjpe, Sarita S.;
Jacobi, Ulrike G.;
van Heeringen, Simon J.;
Veenstra, Gert Jan C.

Publication type:

Article

Multifunctional roles of the mammalian CCR4-NOT complex in physiological phenomena.

Published in:

Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00286

By:

Toshifumi Inada;
Arora, Sumit

Publication type:

Article

Deadenylation of mRNA by the CCR4-NOT complex in Drosophila: molecular and developmental aspects.

Published in:

Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00143

By:

Temme, Claudia;
Simonelig, Martine;
Wahle, Elmar

Publication type:

Article

The role of the E3 ligase Not4 in cotranslational quality control.

Published in:

Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00141

By:

Panasenko, Olesya O.

Publication type:

Article

Insights into the structure and architecture of the CCR4-NOT complex.

Published in:

Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00137

By:

Kun Xu;
Yuwei Bai;
Aili Zhang;
Qionglin Zhang;
Bartlam, Mark G.

Publication type:

Article

Novel roles of the multi-functional CCR4-NOT complex in post-transcriptional regulation.

Published in:

Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00135

By:

Toshifumi Inada;
Shiho Makino

Publication type:

Article

Cytoplasmic deadenylase Ccr4 is required for translational repression of LRG1 mRNA in the stationary phase.

Published in:

PLoS ONE, 2017, v. 12, n. 2, p. 1, doi. 10.1371/journal.pone.0172476

By:

Duy, Duong Long;
Suda, Yasuyuki;
Irie, Kenji

Publication type:

Article

The mRNA Decay Pathway Regulates the Expression of the Flo11 Adhesin and Biofilm Formation in Saccharomyces cerevisiae.

Published in:

Genetics, 2012, v. 191, n. 4, p. 1387, doi. 10.1534/genetics.112.141432

By:

Lo, Tricia L.;
Yue Qu;
Uwamahoro, Nathalie;
Quenault, Tara;
Beilharz, Traude H.;
Traven, Ana

Publication type:

Article

Cleavage factor Im (CFIm) as a regulator of alternative polyadenylation.

Published in:

Biochemical Society Transactions, 2016, v. 44, n. 4, p. 1051, doi. 10.1042/BST20160078

By:

Hardy, Jessica G.;
Norbury, Chris J.

Publication type:

Article

mRNA deadenylation by Pan2-Pan3.

Published in:

Biochemical Society Transactions, 2014, v. 42, n. 1, p. 184, doi. 10.1042/BST20130211

By:

Wolf, Jana;
Passmore, Lori A.

Publication type:

Article

Deadenylation of cytoplasmic mRNA by the mammalian Ccr4-Not complex.

Published in:

Biochemical Society Transactions, 2012, v. 40, n. 4, p. 896, doi. 10.1042/BST20120074

By:

Doidge, Rachel;
Mittal, Saloni;
Aslam, Akhmed;
Winkler, G. Sebastiaan

Publication type:

Article

The role of mammalian poly(A)-binding proteins in co-ordinating mRNA turnover.

Published in:

Biochemical Society Transactions, 2012, v. 40, n. 4, p. 856, doi. 10.1042/BST20120100

By:

Brook, Matthew;
Gray, Nicola K.

Publication type:

Article

General and MicroRNA-Mediated mRNA Degradation Occurs on Ribosome Complexes in Drosophila Cells.

Published in:

Molecular & Cellular Biology, 2015, v. 35, n. 13, p. 2309, doi. 10.1128/MCB.01346-14

By:

Antic, Sanja;
Wolfinger, Michael T.;
Skucha, Anna;
Hosiner, Stefanie;
Dorner, Silke

Publication type:

Article

Poly(A)-tail profiling reveals an embryonic switch in translational control.

Published in:

Nature, 2014, v. 508, n. 7494, p. 66, doi. 10.1038/nature13007

By:

Subtelny, Alexander O.;
Eichhorn, Stephen W.;
Chen, Grace R.;
Sive, Hazel;
Bartel, David P.

Publication type:

Article

The central region of CNOT1 and CNOT9 stimulates deadenylation by the Ccr4-Not nuclease module.

Published in:

Biochemical Journal, 2018, v. 475, n. 21, p. 3437, doi. 10.1042/BCJ20180456

By:

Pavanello, Lorenzo;
Hall, Benjamin;
Airhihen, Blessing;
Winkler, Gerlof Sebastiaan

Publication type:

Article

The enzyme activities of Caf1 and Ccr4 are both required for deadenylation by the human Ccr4-Not nuclease module.

Published in:

Biochemical Journal, 2015, v. 469, n. 1, p. 169, doi. 10.1042/BJ20150304

By:

Maryati, Maryati;
Airhihen, Blessing;
Winkler, G. Sebastiaan

Publication type:

Article

The Role of Nocturnin in Early Adipogenesis and Modulation of Systemic Insulin Resistance in Human.

Published in:

Obesity (19307381), 2012, v. 20, n. 8, p. 1558, doi. 10.1038/oby.2012.37

By:

Hee, Siow-Wey;
Tsai, Shu-Huei;
Chang, Yi-Cheng;
Chang, Ching-Jin;
Yu, I-Shing;
Lee, Po-Chu;
Lee, Wei-Jei;
Yun-Chia Chang, Emily;
Chuang, Lee-Ming

Publication type:

Article

Mammalian GW220/TNGW1 is essential for the formation of GW/P bodies containing miRISC.

Published in:

Journal of Cell Biology, 2012, v. 198, n. 4, p. 529, doi. 10.1083/jcb.201201153

By:

Castilla-Llorente, Virginia;
Spraggon, Lee;
Okamura, Miwako;
Naseeruddin, Saif;
Adamow, Matthew;
Qamar, Sarah;
Jidong Liu

Publication type:

Article

Circular RNAs in Muscle Function and Disease.

Published in:

International Journal of Molecular Sciences, 2018, v. 19, n. 11, p. 3454, doi. 10.3390/ijms19113454

By:

Greco, Simona;
Cardinali, Beatrice;
Falcone, Germana;
Martelli, Fabio

Publication type:

Article

Identification of Glutathione Peroxidase (GPX) Gene Family in Rhodiola crenulata and Gene Expression Analysis under Stress Conditions.

Published in:

International Journal of Molecular Sciences, 2018, v. 19, n. 11, p. 3329, doi. 10.3390/ijms19113329

By:

Zhang, Lipeng;
Wu, Mei;
Yu, Deshui;
Teng, Yanjiao;
Wei, Tao;
Chen, Chengbin;
Song, Wenqin

Publication type:

Article

Unraveling the CNOT: A new player in the autophagy-cell death nexus.

Published in:

Science Signaling, 2018, v. 11, n. 516, p. 1, doi. 10.1126/scisignal.aar6364

By:

Das, Saumya

Publication type:

Article

The CCR4-NOT deadenylase complex controls Atg7-dependent cell death and heart function.

Published in:

Science Signaling, 2018, v. 11, n. 516, p. 1, doi. 10.1126/scisignal.aan3638

By:

Yamaguchi, Tomokazu;
Suzuki, Takashi;
Sato, Teruki;
Takahashi, Akinori;
Watanabe, Hiroyuki;
Kadowaki, Ayumi;
Natsui, Miyuki;
Inagaki, Hideaki;
Arakawa, Satoko;
Nakaoka, Shinji;
Koizumi, Yukio;
Seki, Shinsuke;
Adachi, Shungo;
Fukao, Akira;
Fujiwara, Toshinobu;
Natsume, Tohru;
Kimura, Akinori;
Komatsu, Masaaki;
Shimizu, Shigeomi;
Ito, Hiroshi

Publication type:

Article

Novel interaction between CCR4 and CAF1 in rice CCR4-NOT deadenylase complex.

Published in:

Plant Molecular Biology, 2017, v. 93, n. 1-2, p. 79, doi. 10.1007/s11103-016-0548-6

By:

Chou, Wei-Lun;
Chung, Yue-Lin;
Fang, Jhen-Cheng;
Lu, Chung-An

Publication type:

Article

Divergence of the expression and subcellular localization of CCR4-associated factor 1 (CAF1) deadenylase proteins in Oryza sativa.

Published in:

Plant Molecular Biology, 2014, v. 85, n. 4-5, p. 443, doi. 10.1007/s11103-014-0196-7

By:

Chou, Wei-Lun;
Huang, Li-Fen;
Fang, Jhen-Cheng;
Yeh, Ching-Hui;
Hong, Chwan-Yang;
Wu, Shaw-Jye;
Lu, Chung-An

Publication type:

Article

The RRM1 domain of the poly(A)-binding protein from Saccharomyces cerevisiae is critical to control of mRNA deadenylation.

Published in:

Molecular Genetics & Genomics, 2013, v. 288, n. 9, p. 401, doi. 10.1007/s00438-013-0759-3

By:

Zhang, Chongxu;
Lee, Darren;
Chiang, Yueh-Chin;
Richardson, Roy;
Park, Shiwha;
Wang, Xin;
Laue, Thomas;
Denis, Clyde

Publication type:

Article

Loss of β-cell identity and diabetic phenotype in mice caused by disruption of CNOT3-dependent mRNA deadenylation.

Published in:

Communications Biology, 2020, v. 3, n. 1, p. N.PAG, doi. 10.1038/s42003-020-01201-y

By:

Mostafa, Dina;
Yanagiya, Akiko;
Georgiadou, Eleni;
Wu, Yibo;
Stylianides, Theodoros;
Rutter, Guy A.;
Suzuki, Toru;
Yamamoto, Tadashi

Publication type:

Article

Changes in poly(A) tail length dynamics from the loss of the circadian deadenylase Nocturnin.

Published in:

Scientific Reports, 2015, p. 17059, doi. 10.1038/srep17059

By:

Kojima, Shihoko;
Gendreau, Kerry L.;
Sher-Chen, Elaine L.;
Gao, Peng;
Green, Carla B.

Publication type:

Article

A non-proteolytic role for ubiquitin in deadenylation of MHC-I mRNA by the RNA-binding E3-ligase MEX-3C.

Published in:

Scientific Reports, 2015, p. 8670, doi. 10.1038/ncomms9670

By:

Cano, Florencia;
Rapiteanu, Radu;
Sebastiaan Winkler, G.;
Lehner, Paul J.

Publication type:

Article

Cantharidin represses invasion of pancreatic cancer cells through accelerated degradation of MMP2 mRNA.

Published in:

Scientific Reports, 2015, v. 5, n. 1, p. 1, doi. 10.1038/srep11836

By:

Shen, Meng;
Wu, Meng-Yao;
Chen, Long-Pei;
Zhi, Qiaoming;
Gong, Fei-Ran;
Chen, Kai;
Li, Dao-Ming;
Wu, Yadi;
Tao, Min;
Li, Wei

Publication type:

Article

Cantharidin represses invasion of pancreatic cancer cells through accelerated degradation of MMP2 mRNA.

Published in:

Scientific Reports, 2015, p. 11836, doi. 10.1038/srep11836

By:

Shen, Meng;
Wu, Meng-Yao;
Chen, Long-Pei;
Zhi, Qiaoming;
Gong, Fei-Ran;
Chen, Kai;
Li, Dao-Ming;
Wu, Yadi;
Tao, Min;
Li, Wei

Publication type:

Article

Rous Sarcoma Virus RNA Stability Element Inhibits Deadenylation of mRNAs with Long 3'UTRs.

Published in:

Viruses (1999-4915), 2017, v. 9, n. 8, p. 204, doi. 10.3390/v9080204

By:

Balagopal, Vidya;
Beemon, Karen L.

Publication type:

Article

Pre- and Postovulatory Aging of Murine Oocytes Affect the Transcript Level and Poly(A) Tail Length of Maternal Effect Genes.

Published in:

PLoS ONE, 2014, v. 9, n. 10, p. 1, doi. 10.1371/journal.pone.0108907

By:

Dankert, Debora;
Demond, Hannah;
Trapphoff, Tom;
Heiligentag, Martyna;
Rademacher, Katrin;
Eichenlaub-Ritter, Ursula;
Horsthemke, Bernhard;
Grümmer, Ruth

Publication type:

Article

Effects of the Yeast RNA-Binding Protein Whi3 on the Half-Life and Abundance of CLN3 mRNA and Other Targets.

Published in:

PLoS ONE, 2013, v. 8, n. 12, p. 1, doi. 10.1371/journal.pone.0084630

By:

Cai, Ying;
Futcher, Bruce

Publication type:

Article

HPat a Decapping Activator Interacting with the miRNA Effector Complex.

Published in:

PLoS ONE, 2013, v. 8, n. 8, p. 1, doi. 10.1371/journal.pone.0071860

By:

Barišić-Jäger, Elisabeth;
Kręcioch, Izabela;
Hosiner, Stefanie;
Antic, Sanja;
Dorner, Silke

Publication type:

Article

Biochemical and Biophysical Characterization of the Deadenylase CrCaf1 from Chlamydomonas reinhardtii.

Published in:

PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0069582

By:

Zhang, Jia-Quan;
He, Guang-Jun;
Yan, Yong-Bin

Publication type:

Article

The eIF4E-Binding Protein Eap1p Functions in Vts1p- Mediated Transcript Decay.

Published in:

PLoS ONE, 2012, v. 7, n. 10, p. 1, doi. 10.1371/journal.pone.0047121

By:

Rendl, Laura M.;
Bieman, Melissa A.;
Vari, Heli K.;
Smibert, Craig A.

Publication type:

Article

mRNA Decay Proteins Are Targeted to poly(A)+ RNA and dsRNA-Containing Cytoplasmic Foci That Resemble P-Bodies in Entamoeba histolytica.

Published in:

PLoS ONE, 2012, v. 7, n. 9, p. 1, doi. 10.1371/journal.pone.0045966

By:

López-Rosas, Itzel;
Orozco, Esther;
Marchat, Laurence A.;
García-Rivera, Guillermina;
Guillen, Nancy;
Weber, Christian;
Carrillo-Tapia, Eduardo;
Dez de la Cruz, Olga Hernán;
Pérez-Plasencia, Carlos;
López-Camarillo, César;
Stoecklin, Georg

Publication type:

Article

A Deadenylase Assay by Size-Exclusion Chromatography.

Published in:

PLoS ONE, 2012, v. 7, n. 3, p. 1, doi. 10.1371/journal.pone.0033700

By:

Guang-Jun He;
Yong-Bin Yan

Publication type:

Article

Interaction between NANOS2 and the CCR4-NOT Deadenylation Complex Is Essential for Male Germ Cell Development in Mouse.

Published in:

PLoS ONE, 2012, v. 7, n. 3, p. 1, doi. 10.1371/journal.pone.0033558

By:

Suzuki, Atsushi;
Saba, Rie;
Miyoshi, Kei;
Morita, Yoshinori;
Saga, Yumiko

Publication type:

Article

Transcriptome dynamics in early zebrafish embryogenesis determined by high-resolution time course analysis of 180 successive, individual zebrafish embryos.

Published in:

BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3672-z

By:

Rauwerda, Han;
Pagano, Johanna F. B.;
de Leeuw, Wim C.;
Ensink, Wim;
Nehrdich, Ulrike;
de Jong, Mark;
Jonker, Martijs;
Spaink, Herman P.;
Breit, Timo M.

Publication type:

Article