Works matching DE "COMPARATIVE genetics"

Results: 233

Construction of an integrated genetic linkage map and detection of quantitative trait loci for ascochyta blight resistance in faba bean (Vicia faba L.).

Published in:

Euphytica, 2019, v. 215, n. 3, p. 1, doi. 10.1007/s10681-019-2365-x

By:

Sudheesh, S.;
Braich, S.;
Kaur, S.;
Forster, J. W.;
Kimber, R. B. E.;
Paull, J. G.

Publication type:

Article

Multiple genome viewer (MGV): a new tool for visualization and comparison of multiple annotated genomes.

Published in:

Mammalian Genome, 2022, v. 33, n. 1, p. 44, doi. 10.1007/s00335-021-09904-1

By:

Richardson, Joel E.;
Baldarelli, Richard M.;
Bult, Carol J.

Publication type:

Article

The Lipidome Fingerprint of Longevity.

Published in:

Molecules, 2020, v. 25, n. 18, p. 4343, doi. 10.3390/molecules25184343

By:

Jové, Mariona;
Mota-Martorell, Natàlia;
Pradas, Irene;
Galo-Licona, José Daniel;
Martín-Gari, Meritxell;
Obis, Èlia;
Sol, Joaquim;
Pamplona, Reinald;
Plastina, Pierluigi

Publication type:

Article

Macrophage CGI-58 Attenuates Inflammatory Responsiveness via Promotion of PPARγ Signaling.

Published in:

Cellular Physiology & Biochemistry (Karger AG), 2016, v. 38, n. 2, p. 696, doi. 10.1159/000443027

By:

Yang, Dan;
Chen, Haimei;
Zeng, Xu;
Xie, Ping;
Wang, Xincun;
Liu, Chang

Publication type:

Article

The OGCleaner: filtering false-positive homology clusters.

Published in:

Bioinformatics, 2017, v. 33, n. 1, p. 125, doi. 10.1093/bioinformatics/btw571

By:

Fujimoto, M. Stanley;
Suvorov, Anton;
Jensen, Nicholas O.;
Clement, Mark J.;
Snell, Quinn;
Bybee, Seth M.

Publication type:

Article

Benchmarking the next generation of homology inference tools.

Published in:

Bioinformatics, 2016, v. 32, n. 17, p. 2636, doi. 10.1093/bioinformatics/btw305

By:

Saripella, Ganapathi Varma;
Sonnhammer, Erik L. L.;
Forslund, Kristoffer

Publication type:

Article

Calculating and scoring high quality multiple flexible protein structure alignments.

Published in:

Bioinformatics, 2016, v. 32, n. 17, p. 2650, doi. 10.1093/bioinformatics/btw300

By:

Ritchie, David W.

Publication type:

Article

XGSA: A statistical method for cross-species gene set analysis.

Published in:

Bioinformatics, 2016, v. 32, n. 17, p. i620, doi. 10.1093/bioinformatics/btw428

By:

Djordjevic, Djordje;
Kusumi, Kenro;
Ho, Joshua W. K.

Publication type:

Article

GenePainter v. 2.0 resolves the taxonomic distribution of intron positions.

Published in:

2015

By:

Mühlhausen, Stefanie;
Hellkamp, Marcel;
Kollmar, Martin

Publication type:

Product Review

Comparative genetics of longevity and cancer: insights from long-lived rodents.

Published in:

Nature Reviews Genetics, 2014, v. 15, n. 8, p. 531, doi. 10.1038/nrg3728

By:

Gorbunova, Vera;
Seluanov, Andrei;
Zhang, Zhengdong;
Gladyshev, Vadim N.;
Vijg, Jan

Publication type:

Article

Genetic Predisposition to Hepatocellular Carcinoma.

Published in:

Metabolites (2218-1989), 2023, v. 13, n. 1, p. 35, doi. 10.3390/metabo13010035

By:

Pascale, Rosa M.;
Calvisi, Diego F.;
Feo, Francesco;
Simile, Maria M.

Publication type:

Article

Landscape genetics highlights species-specific ecological influences on gene flow in highland frog populations from northeastern Brazil.

Published in:

Ecological Processes, 2025, v. 14, n. 1, p. 1, doi. 10.1186/s13717-025-00625-w

By:

de Andrade Lima, José Henrique;
Katzenberger, Marco;
Gehara, Marcelo;
Simões, Pedro Ivo

Publication type:

Article

Comparative gene promoter analysis: an in silico strategy to identify candidate regulatory factors for Gla Rich Protein.

Published in:

Journal of Applied Ichthyology, 2012, v. 28, n. 3, p. 372, doi. 10.1111/j.1439-0426.2012.02001.x

By:

Conceição, N.;
Fazenda, C.;
Cancela, M. L.

Publication type:

Article

Comparative genetics of postembryonic development as a means to understand evolutionary change.

Published in:

Journal of Applied Ichthyology, 2012, v. 28, n. 3, p. 306, doi. 10.1111/j.1439-0426.2012.01999.x

By:

Harris, M. P.

Publication type:

Article

Identification of hub genes and pathophysiological mechanism related to acute unilateral vestibulopathy by integrated bioinformatics analysis.

Published in:

Frontiers in Neurology, 2022, v. 13, p. 01, doi. 10.3389/fneur.2022.987076

By:

Yajing Cheng;
Jianrong Zheng;
Ying Zhan;
Cong Liu;
Bihua Lu;
Jun Hu

Publication type:

Article

Quantifying uncertainty in inferences of landscape genetic resistance due to choice of individual‐based genetic distance metric.

Published in:

Molecular Ecology Resources, 2024, v. 24, n. 1, p. 1, doi. 10.1111/1755-0998.13831

By:

Beninde, Joscha;
Wittische, Julian;
Frantz, Alain C.

Publication type:

Article

De novo assemblies of Luffa acutangula and Luffa cylindrica genomes reveal an expansion associated with substantial accumulation of transposable elements.

Published in:

Molecular Ecology Resources, 2021, v. 21, n. 1, p. 212, doi. 10.1111/1755-0998.13240

By:

Pootakham, Wirulda;
Sonthirod, Chutima;
Naktang, Chaiwat;
Nawae, Wanapinun;
Yoocha, Thippawan;
Kongkachana, Wasitthee;
Sangsrakru, Duangjai;
Jomchai, Nukoon;
U‐thoomporn, Sonicha;
Sheedy, John R.;
Buaboocha, Jarunee;
Mekiyanon, Supat;
Tangphatsornruang, Sithichoke

Publication type:

Article

Chromosome‐level genome assembly of the razor clam Sinonovacula constricta (Lamarck, 1818).

Published in:

Molecular Ecology Resources, 2019, v. 19, n. 6, p. 1647, doi. 10.1111/1755-0998.13086

By:

Ran, Zhaoshou;
Li, Zhenzhen;
Yan, Xiaojun;
Liao, Kai;
Kong, Fei;
Zhang, Lin;
Cao, Jiayi;
Zhou, Chengxu;
Zhu, Peng;
He, Shan;
Huang, Wanlong;
Xu, Jilin

Publication type:

Article

Quest for Orthologs in the Era of Biodiversity Genomics.

Published in:

Genome Biology & Evolution, 2024, v. 16, n. 10, p. 1, doi. 10.1093/gbe/evae224

By:

Langschied, Felix;
Bordin, Nicola;
Cosentino, Salvatore;
Fuentes-Palacios, Diego;
Glover, Natasha;
Hiller, Michael;
Hu, Yanhui;
Huerta-Cepas, Jaime;
Coelho, Luis Pedro;
Iwasaki, Wataru;
Majidian, Sina;
Manzano-Morales, Saioa;
Persson, Emma;
Richards, Thomas A;
Gabaldón, Toni;
Sonnhammer, Erik;
Thomas, Paul D;
Dessimoz, Christophe;
Ebersberger, Ingo

Publication type:

Article

Highlight: Comparative Population Genomics—Answering Old Questions with New Data.

Published in:

2022

By:

McGrath, Casey

Publication type:

Editorial

Comparative Population Genetics in the Human Gut Microbiome.

Published in:

Genome Biology & Evolution, 2022, v. 14, n. 1, p. 1, doi. 10.1093/gbe/evab116

By:

Shoemaker, William R;
Chen, Daisy;
Garud, Nandita R

Publication type:

Article

Comparative and Evolutionary Analysis of Major Peanut Allergen Gene Families.

Published in:

Genome Biology & Evolution, 2014, v. 6, n. 9, p. 2468, doi. 10.1093/gbe/evu189

By:

Ratnaparkhe, Milind B.;
Lee, Tae-Ho;
Tan, Xu;
Wang, Xiyin;
Li, Jingping;
Kim, Changsoo;
Rainville, Lisa K.;
Lemke, Cornelia;
Compton, Rosana O.;
Robertson, Jon;
Gallo, Maria;
Bertioli, David J.;
Paterson, Andrew H.

Publication type:

Article

Codons Support the Maintenance of Intrinsic DNA Polymer Flexibility over Evolutionary Timescales.

Published in:

Genome Biology & Evolution, 2012, v. 4, n. 9, p. 954, doi. 10.1093/gbe/evs073

By:

Babbitt, G. A.;
Schulze, K. V.

Publication type:

Article

Characterization of integrative and conjugative elements carrying erm(B) and tet(O) resistance determinants in streptococcus uberis isolates from bovine milk in Chiba prefecture, Japan: CompArative GEne cluster analysis toolbox with ICEfinder.

Published in:

BMC Research Notes, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13104-024-07065-3

By:

Maeda, Takahiro;
Tsuyuki, Yuzo;
Yoshida, Haruno;
Goto, Mieko;
Takahashi, Takashi

Publication type:

Article

Can template-based protein models guide the design of sequence fitness for enhanced thermal stability of single domain antibodies?

Published in:

PEDS: Protein Engineering, Design & Selection, 2015, v. 28, n. 10, p. 395, doi. 10.1093/protein/gzv047

By:

Olson, Mark A.;
Zabetakis, Dan;
Legler, Patricia M.;
Turner, Kendrick B.;
Anderson, George P.;
Goldman, Ellen R.

Publication type:

Article

Individual chromosome identification, chromosomal collinearity and genetic-physical integrated map in Gossypium darwinii and four D genome cotton species revealed by BAC-FISH.

Published in:

Genes & Genetic Systems, 2012, v. 87, n. 4, p. 233, doi. 10.1266/ggs.87.233

By:

Yimei Gan;
Fang Liu;
Renhai Peng;
Chunying Wang;
Shaohui Li;
Xiangdi Zhang;
Yuhong Wang;
Kunbo Wang

Publication type:

Article

Comparative sequence and structure analysis of eIF1A and eIF1AD.

Published in:

BMC Structural Biology, 2018, v. 18, n. 1, p. N.PAG, doi. 10.1186/s12900-018-0091-6

By:

Yu, Jielin;
Marintchev, Assen

Publication type:

Article

Plastid genomic features and phylogenetic placement in Rosa (Rosaceae) through comparative analysis.

Published in:

BMC Plant Biology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12870-025-06734-0

By:

Jiang, Hui;
He, Shuilian;
He, Jun;
Zuo, Yunjuan;
Guan, Wenling;
Zhao, Yan;
Li, Xuejiao;
Meng, Jing

Publication type:

Article

Comparative genetics of the major histocompatibility complex in humans and nonhuman primates.

Published in:

International Journal of Immunogenetics, 2020, v. 47, n. 3, p. 243, doi. 10.1111/iji.12490

By:

Heijmans, Corrine M.C.;
Groot, Natasja G.;
Bontrop, Ronald E.

Publication type:

Article

Differential Expression of Two-Component System-Related Drought-Responsive Genes in Two Contrasting Drought-Tolerant Soybean Cultivars DT51 and MTD720 Under Well-Watered and Drought Conditions.

Published in:

Plant Molecular Biology Reporter, 2015, v. 33, n. 5, p. 1599, doi. 10.1007/s11105-014-0825-y

By:

Thu, Nguyen;
Hoang, Xuan;
Nguyen, Thuy-Dung;
Thao, Nguyen;
Tran, Lam-Son

Publication type:

Article

Construction of a High-Density Simple Sequence Repeat Consensus Genetic Map for Pear ( Pyrus spp.).

Published in:

Plant Molecular Biology Reporter, 2015, v. 33, n. 2, p. 316, doi. 10.1007/s11105-014-0745-x

By:

Chen, Hui;
Song, Yue;
Li, Lei-Ting;
Khan, M.;
Li, Xiu-Gen;
Korban, Schuyler;
Wu, Jun;
Zhang, Shao-Ling

Publication type:

Article

Rhamnolipids are conserved biosurfactants molecules: implications for their biotechnological potential.

Published in:

Applied Microbiology & Biotechnology, 2013, v. 97, n. 16, p. 7297, doi. 10.1007/s00253-013-4876-z

By:

Perfumo, Amedea;
Rudden, Michelle;
Smyth, Thomas;
Marchant, Roger;
Stevenson, Paul;
Parry, Neil;
Banat, Ibrahim

Publication type:

Article

Comparative genome characterization of Achromobacter members reveals potential genetic determinants facilitating the adaptation to a pathogenic lifestyle.

Published in:

Applied Microbiology & Biotechnology, 2013, v. 97, n. 14, p. 6413, doi. 10.1007/s00253-013-5018-3

By:

Li, Xiangyang;
Hu, Yao;
Gong, Jing;
Zhang, Linshuang;
Wang, Gejiao

Publication type:

Article

Comparative molecular genetic analysis of simian and human HIV-1 integrase interactor INI1/SMARCB1/SNF5.

Published in:

2015

By:

Pyeon, Dohun;
Price, Lenore;
Park, In-Woo

Publication type:

Report

The hitchhiker guide to categorical Banach space theory. Part II.

Published in:

Extracta Mathematicae, 2022, v. 37, n. 1, p. 1, doi. 10.17398/2605-5686.37.1.1

By:

CASTILLO, J. M. F.

Publication type:

Article

Symbiotic Regulatory Genes Controlling Nodule Development in Pisum sativum L.

Published in:

Plants (2223-7747), 2020, v. 9, n. 12, p. 1741, doi. 10.3390/plants9121741

By:

Tsyganov, Viktor E.;
Tsyganova, Anna V.

Publication type:

Article

Comparative Flower and Inflorescence Organogenesis among Genera of Betulaceae: Implications for Phylogenetic Relationships.

Published in:

Botanical Review, 2018, v. 84, n. 1, p. 79, doi. 10.1007/s12229-017-9195-0

By:

Junyi Zhu;
Lifan Zhang;
Baoqing Ren;
Min Chen;
Ruiqi Li;
You Zhou;
Yu Liang;
Jianhua Li;
Zhiduan Chen

Publication type:

Article

Single amino acid change alters specificity of the multi-allelic wheat stem rust resistance locus SR9.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-42747-9

By:

Zhang, Jianping;
Nirmala, Jayaveeramuthu;
Chen, Shisheng;
Jost, Matthias;
Steuernagel, Burkhard;
Karafiatova, Mirka;
Hewitt, Tim;
Li, Hongna;
Edae, Erena;
Sharma, Keshav;
Hoxha, Sami;
Bhatt, Dhara;
Antoniou-Kourounioti, Rea;
Dodds, Peter;
Wulff, Brande B. H.;
Dolezel, Jaroslav;
Ayliffe, Michael;
Hiebert, Colin;
McIntosh, Robert;
Dubcovsky, Jorge

Publication type:

Article

Comparing strategies for combined testing of rare and common variants in whole sequence and genome-wide genotype data.

Published in:

BMC Proceedings, 2016, v. 10, p. 269, doi. 10.1186/s12919-016-0042-9

By:

Malzahn, Dörthe;
Friedrichs, Stefanie;
Bickeböller, Heike

Publication type:

Article

The response to selection in Glycoside Hydrolase Family 13 structures: A comparative quantitative genetics approach.

Published in:

PLoS ONE, 2018, v. 13, n. 4, p. 1, doi. 10.1371/journal.pone.0196135

By:

Hleap, Jose Sergio;
Blouin, Christian

Publication type:

Article

Signature pathway expression of xylose utilization in the genetically engineered industrial yeast Saccharomyces cerevisiae.

Published in:

PLoS ONE, 2018, v. 13, n. 4, p. 1, doi. 10.1371/journal.pone.0195633

By:

Feng, Quanzhou;
Liu, Z. Lewis;
Weber, Scott A.;
Li, Shizhong

Publication type:

Article

Comparative Genetics of the Poly-Q Tract of Ataxin-1 and Its Binding Protein PQBP-1.

Published in:

Biochemical Genetics, 2012, v. 50, n. 3/4, p. 309, doi. 10.1007/s10528-011-9473-1

By:

Kurosaki, Tatsuaki;
Gojobori, Jun;
Ueda, Shintaroh

Publication type:

Article

Genomic tools for comparative conservation genetics among three recently diverged stag beetles (Lucanus, Lucanidae).

Published in:

Insect Conservation & Diversity, 2023, v. 16, n. 6, p. 853, doi. 10.1111/icad.12678

By:

De Vivo, Mattia;
Chou, Min‐Hsun;
Wu, Shu‐Ping;
Kuan, Yi‐Hsiu;
Chen, Wei‐Yun;
Wang, Liang‐Jong;
Morgan, Brett;
Phang, Guan‐Jie;
Huang, Jen‐Pan

Publication type:

Article

Proteome-Wide Inference of Src Homology 3 Domain-Binding Peptides.

Published in:

International Journal of Peptide Research & Therapeutics, 2012, v. 18, n. 4, p. 311, doi. 10.1007/s10989-012-9304-1

By:

Ren, Yanrong

Publication type:

Article

Comparative transcriptomics of two environmentally relevant cyanobacteria reveals unexpected transcriptome diversity.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2014, v. 8, n. 10, p. 2056, doi. 10.1038/ismej.2014.57

By:

Voigt, Karsten;
Sharma, Cynthia M;
Mitschke, Jan;
Joke Lambrecht, S;
Voß, Björn;
Hess, Wolfgang R;
Steglich, Claudia

Publication type:

Article

Comparative transcriptome analysis of aerial and subterranean pods development provides insights into seed abortion in peanut.

Published in:

Plant Molecular Biology, 2014, v. 85, n. 4-5, p. 395, doi. 10.1007/s11103-014-0193-x

By:

Zhu, Wei;
Chen, Xiaoping;
Li, Haifen;
Zhu, Fanghe;
Hong, Yanbin;
Varshney, Rajeev;
Liang, Xuanqiang

Publication type:

Article

Sexual dimorphic floral development in dioecious plants revealed by transcriptome, phytohormone, and DNA methylation analysis in <i>Populus tomentosa</i>.

Published in:

Plant Molecular Biology, 2013, v. 83, n. 6, p. 559, doi. 10.1007/s11103-013-0108-2

By:

Song, Yuepeng;
Ma, Kaifeng;
Ci, Dong;
Chen, Qingqing;
Tian, Jiaxing;
Zhang, Deqiang

Publication type:

Article

Homology modeling and docking studies of ENPP4: a BCG activated tumoricidal macrophage protein.

Published in:

Lipids in Health & Disease, 2016, v. 15, p. 1, doi. 10.1186/s12944-016-0189-4

By:

Dongmei Yan;
Weiwei Han;
Zehua Dong;
Qihui Liu;
Zheng Jin;
Dong Chu;
Yuan Tian;
Jinpei Zhang;
Dandan Song;
Dunhuang Wang;
Xun Zhu

Publication type:

Article

Comparative and phylogenetic analysis of Potentilla and Dasiphora (Rosaceae) based on plastid genome.

Published in:

BMC Plant Biology, 2025, v. 25, p. 1, doi. 10.1186/s12870-025-06186-6

By:

Li, Xiaoping;
Xu, Hao;
Yu, Jingya;
Han, Yun;
Han, Shuang;
Niu, Yu;
Zhang, Faqi

Publication type:

Article

Molecular phylogeny and comparative chloroplast genome analysis of the type species Crucigenia quadrata.

Published in:

BMC Plant Biology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12870-025-06070-3

By:

Wang, Ting;
Feng, Huan;
Zhu, Huan;
Zhong, Bojian

Publication type:

Article