Works matching DE "CLOSTRIDIUM thermocellum"

Results: 193

Genome-based Study on the Mechanism of Rare Earth Neodymium Ions Increasing Ethanol Production from Clostridium thermocellum.

Published in:

BioResources, 2025, v. 20, n. 2, p. 3155, doi. 10.15376/biores.20.2.3155-3175

By:

Jinna Cui;
Tiantian Sun;
Lixia Liu;
Zhanying Liu

Publication type:

Article

The final proteolytic step in transmembrane signaling of multiple RsgI anti-s factors in Clostridium thermocellum.

Published in:

Bioscience Reports, 2025, v. 45, n. 4, p. 233, doi. 10.1042/BSR20253055

By:

Wen Wen;
Chao Chen;
Qiu Cui;
Jinsong Xuan;
Yingang Feng

Publication type:

Article

Expression and purification of affinity-tagged variants of the photochemical reaction center from Heliobacterium modesticaldum.

Published in:

Photosynthesis Research, 2019, v. 142, n. 3, p. 335, doi. 10.1007/s11120-019-00672-3

By:

Orf, Gregory S.;
Redding, Kevin E.

Publication type:

Article

Anaerobic microplate assay for direct microbial conversion of switchgrass and Avicel using <italic>Clostridium thermocellum</italic>.

Published in:

Biotechnology Letters, 2018, v. 40, n. 2, p. 303, doi. 10.1007/s10529-017-2467-2

By:

Oguntimein, Gbekeloluwa B.;
Rodriguez, Miguel;
Dumitrache, Alexandru;
Shollenberger, Todd;
Decker, Stephen R.;
Davison, Brian H.;
Brown, Steven D.

Publication type:

Article

Ethanol tolerance in engineered strains of Clostridium thermocellum.

Published in:

Biotechnology for Biofuels & Bioproducts, 2023, v. 16, n. 1, p. 1, doi. 10.1186/s13068-023-02379-z

By:

Olson, Daniel G.;
Maloney, Marybeth I.;
Lanahan, Anthony A.;
Cervenka, Nicholas D.;
Xia, Ying;
Pech-Canul, Angel;
Hon, Shuen;
Tian, Liang;
Ziegler, Samantha J.;
Bomble, Yannick J.;
Lynd, Lee R.

Publication type:

Article

Kinetic characterization of annotated glycolytic enzymes present in cellulose-fermenting Clostridium thermocellum suggests different metabolic roles.

Published in:

Biotechnology for Biofuels & Bioproducts, 2023, v. 16, n. 1, p. 1, doi. 10.1186/s13068-023-02362-8

By:

Daley, Steve R.;
Gallanosa, Patricia Mae;
Sparling, Richard

Publication type:

Article

Simultaneous expression of an endogenous spermidine synthase and a butanol dehydrogenase from Thermoanaerobacter pseudethanolicus in Clostridium thermocellum results in increased resistance to acetic acid and furans, increased ethanol production and an increase in thermotolerance

Published in:

Biotechnology for Biofuels & Bioproducts, 2023, v. 16, n. 1, p. 1, doi. 10.1186/s13068-023-02291-6

By:

Kim, Sun-Ki;
Bomble, Yannick J.;
Westpheling, Janet

Publication type:

Article

Declining carbohydrate solubilization with increasing solids loading during fermentation of cellulosic feedstocks by Clostridium thermocellum: documentation and diagnostic tests.

Published in:

Biotechnology for Biofuels & Bioproducts, 2022, v. 15, n. 1, p. 1, doi. 10.1186/s13068-022-02110-4

By:

Kubis, Matthew R.;
Holwerda, Evert K.;
Lynd, Lee R.

Publication type:

Article

Composition and yield of non-cellulosic and cellulosic sugars in soluble and particulate fractions during consolidated bioprocessing of poplar biomass by Clostridium thermocellum.

Published in:

Biotechnology for Biofuels & Bioproducts, 2022, v. 15, n. 1, p. 1, doi. 10.1186/s13068-022-02119-9

By:

Biswal, Ajaya K.;
Hengge, Neal N.;
Black, Ian M.;
Atmodjo, Melani A.;
Mohanty, Sushree S.;
Ryno, David;
Himmel, Michael E.;
Azadi, Parastoo;
Bomble, Yannick J.;
Mohnen, Debra

Publication type:

Article

Declining carbohydrate solubilization with increasing solids loading during fermentation of cellulosic feedstocks by Clostridium thermocellum: documentation and diagnostic tests.

Published in:

Biotechnology for Biofuels & Bioproducts, 2022, v. 15, n. 1, p. 1, doi. 10.1186/s13068-022-02110-4

By:

Kubis, Matthew R.;
Holwerda, Evert K.;
Lynd, Lee R.

Publication type:

Article

Stereoselective Synthesis of a Tetrasaccharide Fragment from Cellulosome Produced by Clostridium thermocellum.

Published in:

Asian Journal of Organic Chemistry, 2020, v. 9, n. 2, p. 317, doi. 10.1002/ajoc.202000011

By:

Zeng, Yan;
Yang, Jin‐Song

Publication type:

Article

Predicting Selective RNA Processing and Stabilization Operons in Clostridium spp.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.673349

By:

Bhaskar, Yogendra;
Su, Xiaoquan;
Xu, Chenggang;
Xu, Jian

Publication type:

Article

High conversion efficiency of Japanese cedar hydrolyzates into acetic acid by co-culture of Clostridium thermoaceticum and Clostridium thermocellum.

Published in:

Journal of Chemical Technology & Biotechnology, 2016, v. 91, n. 4, p. 1040, doi. 10.1002/jctb.4679

By:

Rabemanolontsoa, Harifara;
Kuninori, Yoshimizu;
Saka, Shiro

Publication type:

Article

Metabolic and evolutionary responses of Clostridium thermocellum to genetic interventions aimed at improving ethanol production.

Published in:

Biotechnology for Biofuels, 2020, v. 13, n. 1, p. 1, doi. 10.1186/s13068-020-01680-5

By:

Holwerda, Evert K.;
Olson, Daniel G.;
Ruppertsberger, Natalie M.;
Stevenson, David M.;
Murphy, Sean J. L.;
Maloney, Marybeth I.;
Lanahan, Anthony A.;
Amador-Noguez, Daniel;
Lynd, Lee R.

Publication type:

Article

Single mutation at a highly conserved region of chloramphenicol acetyltransferase enables isobutyl acetate production directly from cellulose by Clostridium thermocellum at elevated temperatures.

Published in:

Biotechnology for Biofuels, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s13068-019-1583-8

By:

Seo, Hyeongmin;
Lee, Jong-Won;
Garcia, Sergio;
Trinh, Cong T.

Publication type:

Article

Engineering Geobacillus thermoglucosidasius for direct utilisation of holocellulose from wheat straw.

Published in:

Biotechnology for Biofuels, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s13068-019-1540-6

By:

Bashir, Zeenat;
Sheng, Lili;
Anil, Annamma;
Lali, Arvind;
Minton, Nigel P.;
Zhang, Ying

Publication type:

Article

Metabolic engineering of Clostridium thermocellum for n-butanol production from cellulose.

Published in:

Biotechnology for Biofuels, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s13068-019-1524-6

By:

Tian, Liang;
Conway, Peter M.;
Cervenka, Nicholas D.;
Cui, Jingxuan;
Maloney, Marybeth;
Olson, Daniel G.;
Lynd, Lee R.

Publication type:

Article

Unraveling essential cellulosomal components of the (Pseudo)Bacteroides cellulosolvens reveals an extensive reservoir of novel catalytic enzymes.

Published in:

Biotechnology for Biofuels, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s13068-019-1447-2

By:

Zhivin-Nissan, Olga;
Dassa, Bareket;
Morag, Ely;
Kupervaser, Meital;
Levin, Yishai;
Bayer, Edward A.

Publication type:

Article

Construction of consolidated bio-saccharification biocatalyst and process optimization for highly efficient lignocellulose solubilization.

Published in:

Biotechnology for Biofuels, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s13068-019-1374-2

By:

Liu, Shiyue;
Liu, Ya-Jun;
Feng, Yingang;
Li, Bin;
Cui, Qiu

Publication type:

Article

Multiple levers for overcoming the recalcitrance of lignocellulosic biomass.

Published in:

Biotechnology for Biofuels, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s13068-019-1353-7

By:

Lasky, Ronald C.;
Holwerda, Evert K.;
Worthen, Robert S.;
Lynd, Lee R.;
Kothari, Ninad;
Cai, Charles M.;
Wyman, Charles E.;
Davison, Brian H.;
Muchero, Wellington;
Tuskan, Gerald A.;
Gilna, Paul;
Fu, Chunxiang;
Wang, Zeng-Yu;
Nelson, Richard S.;
Dixon, Richard A.;
Biswal, Ajaya K.;
Mohnen, Debra;
Baxter, Holly L.;
Mazarei, Mitra;
Gjersing, Erica E.

Publication type:

Article

Firmicutes-enriched IS1447 represents a group of IS3-family insertion sequences exhibiting unique + 1 transcriptional slippage.

Published in:

Biotechnology for Biofuels, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13068-018-1304-8

By:

Liu, Ya-Jun;
Qi, Kuan;
Zhang, Jie;
Chen, Chao;
Cui, Qiu;
Feng, Yingang

Publication type:

Article

Expressing the Thermoanaerobacterium saccharolyticum pforA in engineered Clostridium thermocellum improves ethanol production.

Published in:

Biotechnology for Biofuels, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13068-018-1245-2

By:

Hon, Shuen;
Holwerda, Evert K.;
Worthen, Robert S.;
Maloney, Marybeth I.;
Tian, Liang;
Cui, Jingxuan;
Lin, Paul P.;
Lynd, Lee R.;
Olson, Daniel G.

Publication type:

Article

Addition of β-galactosidase boosts the xyloglucan degradation capability of endoglucanase Cel9D from Clostridium thermocellum.

Published in:

Biotechnology for Biofuels, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13068-018-1242-5

By:

Herlet, Jonathan;
Schwarz, Wolfgang H.;
Zverlov, Vladimir V.;
Liebl, Wolfgang;
Kornberger, Petra

Publication type:

Article

Biomimetic strategy for constructing <italic>Clostridium thermocellum</italic> cellulosomal operons in <italic>Bacillus subtilis</italic>.

Published in:

Biotechnology for Biofuels, 2018, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13068-018-1151-7

By:

Chang, Jui-Jen;
Anandharaj, Marimuthu;
Ho, Cheng-Yu;
Tsuge, Kenji;
Tsai, Tsung-Yu;
Ke, Huei-Mien;
Lin, Yu-Ju;
Ha Tran, Minh Dung;
Li, Wen-Hsiung;
Huang, Chieh-Chen

Publication type:

Article

A salt-bridge controlled by ligand binding modulates the hydrolysis reaction in a GH5 endoglucanase.

Published in:

PEDS: Protein Engineering, Design & Selection, 2012, v. 25, n. 5, p. 223, doi. 10.1093/protein/gzs010

By:

Badieyan, Somayesadat;
Bevan, David R.;
Zhang, Chenming

Publication type:

Article

Cellulosic ethanol production using a yeast consortium displaying a minicellulosome and ß-glucosidase.

Published in:

Microbial Cell Factories, 2013, v. 12, n. 1, p. 1, doi. 10.1186/1475-2859-12-14

By:

Sujin Kim;
Baek, Seung-Ho;
Kyusung Lee;
Hahn, Ji-Sook

Publication type:

Article

Recombinant production of the therapeutic peptide lunasin.

Published in:: Microbial Cell Factories, 2012, v. 11, n. 1, p. 28, doi. 10.1186/1475-2859-11-28
Publication type:: Article

Development of dual reporter vector system for estimating translational activity of regulatory elements.

Published in:

BMC Plant Biology, 2022, v. 22, n. 1, p. 1, doi. 10.1186/s12870-022-03735-1

By:

Suhorukova, Aleksandra V.;
Tyurin, Alexander A.;
Pavlenko, Olga S.;
Mustafayev, Orkhan N.;
Sinelnikov, Igor G.;
Goldenkova-Pavlova, Irina V.

Publication type:

Article

Characterization of lignocellulose particles during lignocellulose solubilization by Clostridium thermocellum.

Published in:

Bioscience, Biotechnology & Biochemistry, 2017, v. 81, n. 10, p. 2028, doi. 10.1080/09168451.2017.1364619

By:

Ichikawa, Shunsuke;
Nishida, Ayami;
Yasui, Saori;
Karita, Shuichi

Publication type:

Article

Carbohydrate-binding modules influence substrate specificity of an endoglucanase from Clostridium thermocellum.

Published in:

Bioscience, Biotechnology & Biochemistry, 2016, v. 80, n. 1, p. 188, doi. 10.1080/09168451.2015.1069696

By:

Ichikawa, Shunsuke;
Yoshida, Mitsuki;
Karita, Shuichi;
Kondo, Makoto;
Goto, Masakazu

Publication type:

Article

Extracytoplasmic polysaccharides control cellulosomal and non-cellulosomal systems in Herbivorax saccincola A7.

Published in:

Applied Microbiology & Biotechnology, 2024, v. 108, n. 1, p. 1, doi. 10.1007/s00253-024-13310-3

By:

Baramee, Sirilak;
Thianheng, Pakinee;
Uke, Ayaka;
Cheawchanlertfa, Pattsarun;
Tachaapaikoon, Chakrit;
Waeonukul, Rattiya;
Pason, Patthra;
Ratanakhanokchai, Khanok;
Liu, Ya-Jun;
Kosugi, Akihiko

Publication type:

Article

Converting invasive aster (Ageratina adenophora L.) into organic fertilizer source.

Published in:

ScienceAsia, 2022, v. 48, n. 3, p. 294, doi. 10.2306/scienceasia1513-1874.2022.038

By:

Hai Liu;
Yushu Wang;
Qing Zhao

Publication type:

Article

Scale-up fermentation of Escherichia coli for the production of recombinant endoglucanase from Clostridium thermocellum.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-86000-z

By:

Shahzadi, Iram;
Al-Ghamdi, Maryam A.;
Nadeem, Muhammad Shahid;
Sajjad, Muhammad;
Ali, Asif;
Khan, Jalaluddin Azam;
Kazmi, Imran

Publication type:

Article

Transcriptomic analysis of a Clostridium thermocellum strain engineered to utilize xylose: responses to xylose versus cellobiose feeding.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-71428-6

By:

Tafur Rangel, Albert E.;
Croft, Trevor;
González Barrios, Andrés Fernando;
Reyes, Luis H.;
Maness, Pin-Ching;
Chou, Katherine J.

Publication type:

Article

Study on the Sugar-Producing Effect of High-Temperature Anaerobic Straw Biosaccharification Strain.

Published in:

Water (20734441), 2022, v. 14, n. 14, p. N.PAG, doi. 10.3390/w14142186

By:

Xu, Chengjiao;
Ding, Mengqi;
Cui, Chenhao;
Zhao, Peichao;
Yang, Shanshan;
Ding, Jie;
Ren, Nanqi

Publication type:

Article

Clostridium thermocellum ATCC27405 transcriptomic, metabolomic and proteomic profiles after ethanol stress.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 336, doi. 10.1186/1471-2164-13-336

By:

Shihui Yang;
Giannone, Richard J.;
Dice, Lezlee;
Zamin K.Yang;
Engle, Nancy L.;
Tschaplinski, Timothy J.;
Hettich, Robert L.;
Brown, Steven D.

Publication type:

Article

Genome-wide analysis of acetivibrio cellulolyticus provides a blueprint of an elaborate cellulosome system.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 210, doi. 10.1186/1471-2164-13-210

By:

Dassa, Bareket;
Borovok, Ilya;
Lamed, Raphael;
Henrissat, Bernard;
Coutinho, Pedro;
Hemme, Christopher L.;
Yue Huang;
Jizhong Zhou;
Bayer, Edward A.

Publication type:

Article

Immobilized anaerobic fermentation for bio-fuel production by Clostridium co-culture.

Published in:

Bioprocess & Biosystems Engineering, 2014, v. 37, n. 8, p. 1551, doi. 10.1007/s00449-014-1127-3

By:

Xu, Lei;
Tschirner, Ulrike

Publication type:

Article

A hybrid of bees algorithm and flux balance analysis with OptKnock as a platform for in silico optimization of microbial strains.

Published in:

Bioprocess & Biosystems Engineering, 2014, v. 37, n. 3, p. 521, doi. 10.1007/s00449-013-1019-y

By:

Choon, Yee;
Mohamad, Mohd;
Deris, Safaai;
Illias, Rosli;
Chong, Chuii;
Chai, Lian

Publication type:

Article

Unifying themes and distinct features of carbon and nitrogen assimilation by polysaccharide-degrading bacteria: a summary of four model systems.

Published in:

Applied Microbiology & Biotechnology, 2021, v. 105, n. 21/22, p. 8109, doi. 10.1007/s00253-021-11614-2

By:

Gardner, Jeffrey G.;
Schreier, Harold J.

Publication type:

Article

A novel AA10 from Paenibacillus curdlanolyticus and its synergistic action on crystalline and complex polysaccharides.

Published in:

Applied Microbiology & Biotechnology, 2020, v. 104, n. 17, p. 7533, doi. 10.1007/s00253-020-10758-x

By:

Limsakul, Puangpen;
Phitsuwan, Paripok;
Waeonukul, Rattiya;
Pason, Patthra;
Tachaapaikoon, Chakrit;
Poomputsa, Kanokwan;
Kosugi, Akihiko;
Sakka, Makiko;
Sakka, Kazuo;
Ratanakhanokchai, Khanok

Publication type:

Article

Evaluation of promoter sequences for the secretory production of a Clostridium thermocellum cellulase in Paenibacillus polymyxa.

Published in:

Applied Microbiology & Biotechnology, 2018, v. 102, n. 23, p. 10147, doi. 10.1007/s00253-018-9369-7

By:

Heinze, Simon;
Zimmermann, Kerstin;
Ludwig, Christina;
Heinzlmeir, Stephanie;
Schwarz, Wolfgang H.;
Zverlov, Vladimir V.;
Liebl, Wolfgang;
Kornberger, Petra

Publication type:

Article

Rational engineering of Cel5E from Clostridium thermocellum to improve its thermal stability and catalytic activity.

Published in:

Applied Microbiology & Biotechnology, 2018, v. 102, n. 19, p. 8389, doi. 10.1007/s00253-018-9204-1

By:

Torktaz, Ibrahim;
Karkhane, Ali Asghar;
Hemmat, Jafar

Publication type:

Article

Intein-mediated assembly of tunable scaffoldins for facile synthesis of designer cellulosomes.

Published in:

Applied Microbiology & Biotechnology, 2018, v. 102, n. 3, p. 1331, doi. 10.1007/s00253-017-8701-y

By:

Han, Zhenlin;
Su, Wei Wen

Publication type:

Article

Effects of gas condition on acetic acid fermentation by Clostridium thermocellum and Moorella thermoacetica ( C. thermoaceticum).

Published in:

Applied Microbiology & Biotechnology, 2017, v. 101, n. 17, p. 6841, doi. 10.1007/s00253-017-8376-4

By:

Rabemanolontsoa, Harifara;
Nguyen, Dung;
Jusakulvjit, Piradee;
Saka, Shiro

Publication type:

Article

Contributing factors in the improvement of cellulosic H production in Clostridium thermocellum/ Thermoanaerobacterium co-cultures.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 19, p. 8607, doi. 10.1007/s00253-016-7776-1

By:

Wang, Mingyu;
Zhao, Qi;
Li, Ling;
Niu, Kangle;
Li, Yi;
Wang, Fangzhong;
Jiang, Baojie;
Liu, Kuimei;
Jiang, Yi;
Fang, Xu

Publication type:

Article

Enhancement of microbial diversity and methane yield by bacterial bioaugmentation through the anaerobic digestion of Haematococcus pluvialis.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 12, p. 5631, doi. 10.1007/s00253-016-7501-0

By:

Aydin, Sevcan

Publication type:

Article

Clostridium thermocellum releases coumaric acid during degradation of untreated grasses by the action of an unknown enzyme.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 6, p. 2907, doi. 10.1007/s00253-016-7294-1

By:

Herring, Christopher;
Thorne, Philip;
Lynd, Lee

Publication type:

Article

Development of a regulatable plasmid-based gene expression system for Clostridium thermocellum.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 18, p. 7589, doi. 10.1007/s00253-015-6610-5

By:

Mearls, Elizabeth;
Olson, Daniel;
Herring, Christopher;
Lynd, Lee

Publication type:

Article

Insights into electron flux through manipulation of fermentation conditions and assessment of protein expression profiles in Clostridium thermocellum.

Published in:

Applied Microbiology & Biotechnology, 2014, v. 98, n. 14, p. 6497, doi. 10.1007/s00253-014-5798-0

By:

Rydzak, Thomas;
Grigoryan, Marina;
Cunningham, Zack;
Krokhin, Oleg;
Ezzati, Peyman;
Cicek, Nazim;
Levin, David;
Wilkins, John;
Sparling, Richard

Publication type:

Article