Works matching DE "CHROMOSOME duplication"

Results: 2746

Monkeyflower (Mimulus) uncovers the evolutionary basis of the eukaryote telomere sequence variation.

Published in:

PLoS Genetics, 2025, v. 21, n. 6, p. 1, doi. 10.1371/journal.pgen.1011738

By:

Kumawat, Surbhi;
Shametov, Askhan;
Valeeva, Liia R.;
Ju, Yoonha;
Martinez, Irene;
Logeswaran, Dhenugen;
Chen, Hongfei;
Coughlan, Jenn M.;
Chen, Julian J.-L.;
Yuan, Yao-Wu;
Sobel, James M.;
Koo, Dal-Hoe;
Shakirov, Eugene V.;
Choi, Jae Young

Publication type:

Article

Mayer-Rokitansky-Küster-Hauser syndrome associated with 7q11.23 microduplication: A case report.

Published in:

Global Medical Genetics, 2025, v. 12, n. 2, p. 1, doi. 10.1016/j.gmg.2025.100039

By:

da Cunha, Gabriela Corassa Rodrigues;
de Souza, Vanessa Sodré;
Zuben, Marcus Von;
Córdoba, Mara Santos;
Ayrimoraes Soares, Mayra Veloso;
Bonadio, Raphael Severino;
de Oliveira, Daniela Mara;
de Oliveira, Silviene Fabiana;
de Mazzeu Araújo, Juliana Forte;
Pic-Taylor, Aline

Publication type:

Article

Complex Congenital Cardiac Defect Associated with the Combination of 5p Deletion and 4q Duplication in a Newborn: A Case Report.

Published in:

Cytogenetic & Genome Research, 2025, v. 165, n. 1, p. 31, doi. 10.1159/000543591

By:

Kırman, Ülkü Nur;
Aliyev, Ferid;
Soğukpınar, Merve;
Şimşek Kiper, Pelin Özlem;
Aykan, Hayrettin Hakan;
Çelik, Hasan Tolga

Publication type:

Article

pheST operon dynamics and pheS gene duplication mediated genome stability and evolution in E. coli: evidence that fitC4 is an allele of pheS.

Published in:

Molecular Biology Reports, 2025, v. 52, n. 1, p. 1, doi. 10.1007/s11033-025-10539-7

By:

Belagal, Praveen

Publication type:

Article

Genomes of the Caribbean reef-building corals Colpophyllia natans, Dendrogyra cylindrus, and Siderastrea sidereaOpen Access.

Published in:

G3: Genes | Genomes | Genetics, 2025, v. 15, n. 4, p. 1, doi. 10.1093/g3journal/jkaf020

By:

Locatelli, Nicolas S;
Baums, Iliana B

Publication type:

Article

Cognitive decline in an adult with ATR-16 syndrome due to an unbalanced translocation between 11p15.5 and 16p13.3: a case report.

Published in:

Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2025.1595298

By:

Krutish, Angela;
Kukurudz-Gorowski, Rebekah;
Borlot, Felippe;
Frosk, Patrick;
Rockman-Greenberg, Cheryl;
Mhanni, Aizeddin A.

Publication type:

Article

Multiple Retrotransposon-mediated NF-YA Gene Duplication Events Recurred in Diverse Groups of Mammals at Different Ancestry Levels Open Access.

Published in:

Genome Biology & Evolution, 2025, v. 17, n. 5, p. 1, doi. 10.1093/gbe/evaf071

By:

Gallo, Alberto;
Bernardini, Andrea;
Polettini, Sofia;
Dolfini, Diletta;
Gnesutta, Nerina;
Mantovani, Roberto

Publication type:

Article

Evolution of Pineal Nonvisual Opsins in Lizards and the Tuatara and Identification of Lepidopsin: A New Opsin Gene Open Access.

Published in:

Genome Biology & Evolution, 2025, v. 17, n. 5, p. 1, doi. 10.1093/gbe/evaf058

By:

Romero, Ricardo D;
Souza, Flávio S J de

Publication type:

Article

ERCnet: Phylogenomic Prediction of Interaction Networks in the Presence of Gene Duplication Open Access.

Published in:

Molecular Biology & Evolution, 2025, v. 42, n. 5, p. 1, doi. 10.1093/molbev/msaf089

By:

Forsythe, Evan S;
Gatts, Tony C;
Lane, Linnea E;
deRoux, Chris;
Berggren, Monica J;
Rehmann, Elizabeth A;
Zak, Emily N;
Bartel, Trinity;
L'Argent, Luna A;
Sloan, Daniel B

Publication type:

Article

Ectopic Gene Conversion Causing Quantitative Trait Variation Open Access.

Published in:

Molecular Biology & Evolution, 2025, v. 42, n. 5, p. 1, doi. 10.1093/molbev/msaf086

By:

Pfalz, Marina;
Naadja, Seïf-Eddine;
Shykoff, Jacqui Anne;
Kroymann, Juergen

Publication type:

Article

Genome-Wide Analysis of the 12-Oxo-Phytodienoic Acid Reductase Gene Family in Peanut and Functional Characterization of AhOPR6 in Salt Stress.

Published in:

Plants (2223-7747), 2025, v. 14, n. 10, p. 1408, doi. 10.3390/plants14101408

By:

Mou, Yifei;
Sun, Quanxi;
Miao, Haocui;
Wang, Juan;
Wang, Qi;
Wang, Qianqian;
Yan, Caixia;
Yuan, Cuiling;
Zhao, Xiaobo;
Li, Chunjuan;
Shan, Shihua

Publication type:

Article

花生 PLATZ 基因家族鉴定及其在盐胁迫和干旱胁迫下的表达分析.

Published in:

Guangdong Agricultural Sciences, 2025, v. 52, n. 3, p. 14, doi. 10.16768/j.issn.1004-874X.2025.03.002

By:

陈新起;
林雄健;
胡梦琴;
唐滨泉;
吴小丽;
谭家壮;
陈少菜;
宋昌艺;
李嘉兴;
冯恩友

Publication type:

Article

Phylogenomic and Evolutionary Insights into Lipoprotein Lipase (LPL) Genes in Tambaqui: Gene Duplication, Tissue-Specific Expression and Physiological Implications.

Published in:

Genes, 2025, v. 16, n. 5, p. 548, doi. 10.3390/genes16050548

By:

Paixão, Rômulo Veiga;
Bandeira, Izabel Correa;
Reis, Vanessa Ribeiro;
da Silva, Gilvan Ferreira;
Almeida O'Sullivan, Fernanda Loureiro de;
Varela, Eduardo Sousa

Publication type:

Article

Chromosome Ordinal Number-Related Genomic Stability Revealed Among Oryza and Other Poaceae Plants.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4778, doi. 10.3390/ijms26104778

By:

Wang, Xiyin;
Liu, Quanlong;
Song, Bowen;
Wang, Jiangli;
Wang, Wei;
Qi, Huilong;
Zhang, Huizhe;
Jia, Yuelong;
Li, Yingjie;
Li, Zongjin;
Tian, Miaoyu;
Cao, Yixin;
Jin, Yongchao

Publication type:

Article

Tissue- and Condition-Specific Biosynthesis of Ascorbic Acid in Glycine max L.: Insights from Genome-Wide Analyses of Pathway-Encoding Genes, Expression Profiling, and Mass Fraction Determination.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4678, doi. 10.3390/ijms26104678

By:

Aziz, Shahid;
Germano, Thais Andrade;
Sousa Do Nascimento, Maria Adriele dos Santos de;
dos Santos, Clesivan Pereira;
Arnholdt-Schmitt, Birgit;
de Miranda, Maria Raquel Alcântara;
Gomes, Mara Menezes de Assis;
Mazorra Morales, Luis Miguel;
Ayub, Ricardo Antônio;
Oliveira, Jurandi Gonçalves de;
Costa, José Hélio

Publication type:

Article

Genome-Wide Identification and Expression Profiling of Phosphatidylethanolamine-Binding Protein (PEBP) Genes in Helianthus annuus L.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4602, doi. 10.3390/ijms26104602

By:

Sun, Yiyi;
Wang, Yanwen;
Bai, Jingyan;
Guo, Jiatong;
Li, Guiting;
Tian, Qiuzhen;
Lv, Shuping;
Cao, Hengchun;
Yang, Xiaojie;
Liu, Lingyun

Publication type:

Article

Genomic Analysis Reveals the Role of New Genes in Venom Regulatory Network of Parasitoid Wasps.

Published in:

Insects (2075-4450), 2025, v. 16, n. 5, p. 502, doi. 10.3390/insects16050502

By:

Zhang, Bo;
Bu, Yifan;
Song, Jiqiang;
Yuan, Bo;
Xiao, Shan;
Wang, Fang;
Fang, Qi;
Ye, Gongyin;
Yang, Yi;
Ye, Xinhai

Publication type:

Article

Repriming of DNA synthesis at stalled replication forks by human PrimPol.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 12, p. 1383, doi. 10.1038/nsmb.2719

By:

Mourón, Silvana;
Rodriguez-Acebes, Sara;
Martínez-Jiménez, María I;
García-Gómez, Sara;
Chocrón, Sandra;
Blanco, Luis;
Méndez, Juan

Publication type:

Article

Living without origins.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 12, p. 1351, doi. 10.1038/nsmb.2733

By:

Moorefield, Beth

Publication type:

Article

PrimPol breaks replication barriers.

Published in:

Nature Structural & Molecular Biology, 2013, v. 20, n. 12, p. 1348, doi. 10.1038/nsmb.2727

By:

Helleday, Thomas

Publication type:

Article

The spectrum of deletions and duplications in the dystrophin (DMD) gene in a cohort of patients with Duchenne muscular dystrophy in Sri Lanka.

Published in:

2019

By:

Thakur, Nilam;
Abeysekera, Gayan;
Wanigasinghe, Jithangi;
W Dissanayake, Vajira;
W Dissanayake, Vajira H;
Dissanayake, Vajira H W

Publication type:

journal article

Aneuploidy detection in pooled polar bodies using rapid nanopore sequencing.

Published in:

Journal of Assisted Reproduction & Genetics, 2024, v. 41, n. 5, p. 1261, doi. 10.1007/s10815-024-03108-7

By:

Madritsch, Silvia;
Arnold, Vivienne;
Haider, Martha;
Bosenge, Julia;
Pfeifer, Mateja;
Weil, Beatrix;
Zechmeister, Manuela;
Hengstschläger, Markus;
Neesen, Jürgen;
Laccone, Franco

Publication type:

Article

High-resolution PGT-A results in incidental identification of patients with small pathogenic copy number variants.

Published in:

2024

By:

Leahy, Deirdre;
Marin, Diego;
Xu, Jia;
Eccles, Jennifer;
Treff, Nathan R.

Publication type:

Case Study

Genome-wide annotation and expression responses to biotic stresses of the WALL-ASSOCIATED KINASE - RECEPTOR-LIKE KINASE (WAK-RLK) gene family in Apple (Malus domestica).

Published in:

European Journal of Plant Pathology, 2019, v. 153, n. 1, p. 153, doi. 10.1007/s10658-018-1591-8

By:

Zuo, Cunwu;
Liu, Yulian;
Guo, Zhigang;
Mao, Juan;
Chu, Mingyu;
Chen, Baihong

Publication type:

Article

A standardised method for the quantitative analysis of resistance to grapevine powdery mildew.

Published in:

European Journal of Plant Pathology, 2012, v. 133, n. 2, p. 483, doi. 10.1007/s10658-011-9922-z

By:

Miclot, Anne-Sophie;
Wiedemann-Merdinoglu, Sabine;
Duchêne, Eric;
Merdinoglu, Didier;
Mestre, Pere

Publication type:

Article

Non-random chromosome segregation and chromosome eliminations in the fly Bradysia (Sciara).

Published in:

Chromosome Research, 2022, v. 30, n. 2/3, p. 273, doi. 10.1007/s10577-022-09701-9

By:

Gerbi, Susan A.

Publication type:

Article

The fate of a suppressed X-linked meiotic driver: experimental evolution in Drosophila simulans.

Published in:

Chromosome Research, 2022, v. 30, n. 2/3, p. 141, doi. 10.1007/s10577-022-09698-1

By:

Bastide, Héloïse;
Ogereau, David;
Montchamp-Moreau, Catherine;
Gérard, Pierre R.

Publication type:

Article

Ancestral Y-linked genes were maintained by translocation to the X and Y chromosomes fused to an autosomal pair in the Okinawa spiny rat Tokudaia muenninki.

Published in:

Chromosome Research, 2016, v. 24, n. 3, p. 407, doi. 10.1007/s10577-016-9531-y

By:

Murata, Chie;
Kuroki, Yoko;
Imoto, Issei;
Kuroiwa, Asato

Publication type:

Article

Inferring gene duplications, transfers and losses can be done in a discrete framework.

Published in:

Journal of Mathematical Biology, 2016, v. 72, n. 7, p. 1811, doi. 10.1007/s00285-015-0930-z

By:

Ranwez, Vincent;
Scornavacca, Celine;
Doyon, Jean-Philippe;
Berry, Vincent

Publication type:

Article

Deletion and duplication at DYS448 and DYS626 loci: unexpected patterns within the AZFc region of the Y-chromosome.

Published in:

International Journal of Legal Medicine, 2015, v. 129, n. 3, p. 449, doi. 10.1007/s00414-015-1178-2

By:

Turrina, Stefania;
Caratti, Stefano;
Ferrian, Melissa;
Leo, Domenico

Publication type:

Article

Structural complexity and functional diversity of plant NADPH oxidases.

Published in:

Amino Acids, 2018, v. 50, n. 1, p. 79, doi. 10.1007/s00726-017-2491-5

By:

Kaur, Gurpreet;
Guruprasad, Kunchur;
Temple, Brenda R. S.;
Shirvanyants, David G.;
Dokholyan, Nikolay V.;
Pati, Pratap Kumar

Publication type:

Article

Distribution and evolution of the serine/aspartate racemase family in invertebrates.

Published in:

Amino Acids, 2016, v. 48, n. 2, p. 387, doi. 10.1007/s00726-015-2092-0

By:

Uda, Kouji;
Abe, Keita;
Dehara, Yoko;
Mizobata, Kiriko;
Sogawa, Natsumi;
Akagi, Yuki;
Saigan, Mai;
Radkov, Atanas;
Moe, Luke

Publication type:

Article

Comparing the retention mechanisms of tandem duplicates and retrogenes in human and mouse genomes.

Published in:

Genetics Selection Evolution, 2010, v. 42, n. 6, p. 1, doi. 10.1186/1297-9686-42-24

By:

Zhen Wang;
Xiao Dong;
Guohui Ding;
Yixue Li

Publication type:

Article

Integrative genomics analysis of the ever-shrinking pectin methylesterase (PME) gene family in foxtail millet (Setaria italica).

Published in:

Functional Plant Biology, 2022, v. 49, n. 10, p. 874, doi. 10.1071/FP21319

By:

Weina Ge;
Huilong Chen;
Yingchao Zhang;
Shuyan Feng;
Shuailei Wang;
Qian Shang;
Meng Wu;
Ziqi Li;
Lan Zhang;
He Guo;
Yongchao Jin;
Xiyin Wang

Publication type:

Article

DoUBLing up: ubiquitin and ubiquitin-like proteases in genome stability.

Published in:

Biochemical Journal, 2024, v. 481, n. 7, p. 515, doi. 10.1042/BCJ20230284

By:

Foster, Benjamin M.;
Wang, Zijuan;
Schmidt, Christine K.

Publication type:

Article

Enzyme function and evolution through the lens of bioinformatics.

Published in:

Biochemical Journal, 2023, v. 480, n. 22, p. 1845, doi. 10.1042/BCJ20220405

By:

Ribeiro, Antonio J. M.;
Riziotis, Ioannis G.;
Borkakoti, Neera;
Thornton, Janet M.

Publication type:

Article

Organismal roles for the PI3Kα and β isoforms: their specificity, redundancy or cooperation is context-dependent.

Published in:

Biochemical Journal, 2021, v. 478, n. 6, p. 1199, doi. 10.1042/BCJ20210004

By:

Arcucci, Silvia;
Ramos-Delgado, Fernanda;
Cayron, Coralie;
Therville, Nicole;
Gratacap, Marie-Pierre;
Basset, Céline;
Thibault, Benoit;
Guillermet-Guibert, Julie

Publication type:

Article

SNP genotyping and parameter estimation in polyploids using low-coverage sequencing data.

Published in:

Bioinformatics, 2018, v. 34, n. 3, p. 407, doi. 10.1093/bioinformatics/btx587

By:

Blischak, Paul D;
Kubatko, Laura S;
Wolfe, Andrea D

Publication type:

Article

modSaRa: a computationally efficient R package for CNV identification.

Published in:

Bioinformatics, 2017, v. 33, n. 15, p. 2384, doi. 10.1093/bioinformatics/btx212

By:

Feifei Xiao;
Yue Niu;
Ning Hao;
Yanxun Xu;
Zhilin Jin;
Heping Zhang

Publication type:

Article

Resolution and reconciliation of non-binary gene trees with transfers, duplications and losses.

Published in:

Bioinformatics, 2017, v. 33, n. 7, p. 980, doi. 10.1093/bioinformatics/btw778

By:

Jacox, Edwin;
Weller, Mathias;
Tannier, Eric;
Scornavacca, Celine

Publication type:

Article

Weighted mutual information analysis substantially improves domain-based functional network models.

Published in:

Bioinformatics, 2016, v. 32, n. 18, p. 2824, doi. 10.1093/bioinformatics/btw320

By:

Jung Eun Shim;
Insuk Lee

Publication type:

Article

ecceTERA: comprehensive gene tree-species tree reconciliation using parsimony.

Published in:

Bioinformatics, 2016, v. 32, n. 13, p. 2056, doi. 10.1093/bioinformatics/btw105

By:

Jacox, Edwin;
Chauve, Cedric;
Szöllősi, Gergely J.;
Ponty, Yann;
Scornavacca, Celine

Publication type:

Article

Detecting dispersed duplications in high-throughput sequencing data using a database-free approach.

Published in:

Bioinformatics, 2016, v. 32, n. 4, p. 505, doi. 10.1093/bioinformatics/btv621

By:

Kroon, M.;
Lameijer, E. W.;
Lakenberg, N.;
Hehir-Kwa, J. Y.;
Thung, D. T.;
Slagboom, P. E.;
Kok, J. N.;
Ye, K.

Publication type:

Article

Improved gene tree error correction in the presence of horizontal gene transfer.

Published in:

Bioinformatics, 2015, v. 31, n. 7, p. 1211, doi. 10.1093/bioinformatics/btu806

By:

Bansal, Mukul S.;
Yi-Chieh Wu;
Alm, Eric J.;
Kellis, Manolis

Publication type:

Article

DupliPHY-Web: a web server for DupliPHY and DupliPHY-ML.

Published in:

Bioinformatics, 2015, v. 31, n. 3, p. 416, doi. 10.1093/bioinformatics/btu645

By:

Ames, Ryan M.;
Lovell, Simon C.

Publication type:

Article

Bias from removing read duplication in ultra-deep sequencing experiments.

Published in:

Bioinformatics, 2014, v. 30, n. 8, p. 1073, doi. 10.1093/bioinformatics/btt771

By:

Zhou, Wanding;
Chen, Tenghui;
Zhao, Hao;
Eterovic, Agda Karina;
Meric-Bernstam, Funda;
Mills, Gordon B.;
Chen, Ken

Publication type:

Article

MCScanX-transposed: detecting transposed gene duplications based on multiple colinearity scans.

Published in:

Bioinformatics, 2013, v. 29, n. 11, p. 1458, doi. 10.1093/bioinformatics/btt150

By:

Wang, Yupeng;
Li, Jingping;
Paterson, Andrew H.

Publication type:

Article

Evolution of gene neighborhoods within reconciled phylogenies.

Published in:

Bioinformatics, 2012, v. 28, n. 18, p. i382

By:

Bérard, Sèverine;
Gallien, Coralie;
Boussau, Bastien;
Szöllősi, Gergely J.;
Daubin, Vincent;
Tannier, Eric

Publication type:

Article

Genomic context analysis reveals dense interaction network between vertebrate ultraconserved non-coding elements.

Published in:

Bioinformatics, 2012, v. 28, n. 18, p. i395, doi. 10.1093/bioinformatics/bts400

By:

Dimitrieva, Slavica;
Bucher, Philipp

Publication type:

Article

An exome sequencing pipeline for identifying and genotyping common CNVs associated with disease with application to psoriasis.

Published in:

Bioinformatics, 2012, v. 28, n. 18, p. i370, doi. 10.1093/bioinformatics/bts379

By:

Coin, Lachlan J.M.;
Cao, Dandan;
Ren, Jingjing;
Zuo, Xianbo;
Sun, Liangdan;
Yang, Sen;
Zhang, Xuejun;
Cui, Yong;
Li, Yingrui;
Jin, Xin;
Wang, Jun

Publication type:

Article