Works matching DE "CATALYTIC domains"

Results: 847

Biochemical and Structural Characterization of the Ubiquitin-Conjugating Enzyme UBE2W Reveals the Formation of a Noncovalent Homodimer.

Published in:

Cell Biochemistry & Biophysics, 2013, v. 67, n. 1, p. 103, doi. 10.1007/s12013-013-9633-5

By:

Vittal, Vinayak;
Wenzel, Dawn;
Brzovic, Peter;
Klevit, Rachel

Publication type:

Article

LRRK2 dynamics analysis identifies allosteric control of the crosstalk between its catalytic domains.

Published in:

PLoS Biology, 2022, v. 20, n. 2, p. 1, doi. 10.1371/journal.pbio.3001427

By:

Weng, Jui-Hung;
Aoto, Phillip C.;
Lorenz, Robin;
Wu, Jian;
Schmidt, Sven H.;
Manschwetus, Jascha T.;
Kaila-Sharma, Pallavi;
Silletti, Steve;
Mathea, Sebastian;
Chatterjee, Deep;
Knapp, Stefan;
Herberg, Friedrich W.;
Taylor, Susan S.

Publication type:

Article

Ontology extension with NLP-based concept extraction for domain experts in catalytic sciences.

Published in:

Knowledge & Information Systems, 2023, v. 65, n. 12, p. 5503, doi. 10.1007/s10115-023-01919-1

By:

Behr, Alexander S.;
Völkenrath, Marc;
Kockmann, Norbert

Publication type:

Article

Impact of Modular Architecture on Activity of Glycoside Hydrolase Family 5 Subfamily 8 Mannanases.

Published in:

Molecules, 2022, v. 27, n. 6, p. 1915, doi. 10.3390/molecules27061915

By:

Møller, Marie Sofie

Publication type:

Article

Structural Investigations on the SH3b Domains of Clostridium perfringens Autolysin through NMR Spectroscopy and Structure Simulation Enlighten the Cell Wall Binding Function.

Published in:

Molecules, 2021, v. 26, n. 18, p. 5716, doi. 10.3390/molecules26185716

By:

Shan, Yubao;
He, Xiaoling;
Wang, Zi;
Yue, Xiali;
Zhu, Jiang;
Yang, Yunhuang;
Liu, Maili

Publication type:

Article

In Silico Analysis of Fungal and Chloride-Dependent α-Amylases within the Family GH13 with Identification of Possible Secondary Surface-Binding Sites.

Published in:

Molecules, 2021, v. 26, n. 18, p. 5704, doi. 10.3390/molecules26185704

By:

Janíčková, Zuzana;
Janeček, Štefan

Publication type:

Article

Structural Insights in Mammalian Sialyltransferases and Fucosyltransferases: We Have Come a Long Way, but It Is Still a Long Way Down.

Published in:

Molecules, 2021, v. 26, n. 17, p. 5203, doi. 10.3390/molecules26175203

By:

Grewal, Ravneet Kaur;
Shaikh, Abdul Rajjak;
Gorle, Suresh;
Kaur, Manjeet;
Videira, Paula Alexendra;
Cavallo, Luigi;
Chawla, Mohit

Publication type:

Article

Updating Insights into the Catalytic Domain Properties of Plant Cellulose synthase (CesA) and Cellulose synthase-like (Csl) Proteins.

Published in:

Molecules, 2021, v. 26, n. 14, p. 4335, doi. 10.3390/molecules26144335

By:

Daras, Gerasimos;
Templalexis, Dimitris;
Avgeri, Fengoula;
Tsitsekian, Dikran;
Karamanou, Konstantina;
Rigas, Stamatis

Publication type:

Article

Substrate Specificity of Chimeric Enzymes Formed by Interchange of the Catalytic and Specificity Domains of the 5′-Nucleotidase UshA and the 3′-Nucleotidase CpdB.

Published in:

Molecules, 2021, v. 26, n. 8, p. 2307, doi. 10.3390/molecules26082307

By:

Cabezas, Alicia;
López-Villamizar, Iralis;
Costas, María Jesús;
Cameselle, José Carlos;
Ribeiro, João Meireles

Publication type:

Article

Antiproliferative and Antiangiogenic Properties of New VEGFR-2-targeting 2-thioxobenzo[ g ]quinazoline Derivatives (In Vitro).

Published in:

Molecules, 2020, v. 25, n. 24, p. 5944, doi. 10.3390/molecules25245944

By:

Abuelizz, Hatem A.;
Marzouk, Mohamed;
Bakheit, Ahmed H.;
Awad, Hanem M.;
Soltan, Maha M.;
Naglah, Ahmed M.;
Al-Salahi, Rashad

Publication type:

Article

Activity and Affinity of Pin1 Variants.

Published in:

Molecules, 2020, v. 25, n. 1, p. 36, doi. 10.3390/molecules25010036

By:

Born, Alexandra;
Henen, Morkos A.;
Vögeli, Beat;
Hiroaki, Hidekazu;
Tomii, Kentaro

Publication type:

Article

Effect of Hydrophobic Polypeptide Length on Performances of Thermo-Sensitive Hydrogels.

Published in:

Molecules, 2018, v. 23, n. 5, p. 1017, doi. 10.3390/molecules23051017

By:

Han, Jiandong;
Zhao, Xingyu;
Xu, Weiguo;
Wang, Wei;
Han, Yuping;
Feng, Xiangru

Publication type:

Article

Thermobifida fusca Cel6B moves bidirectionally while processively degrading cellulose.

Published in:

Biotechnology for Biofuels & Bioproducts, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13068-024-02588-0

By:

Johnson, Madeline M.;
DeChellis, Antonio;
Nemmaru, Bhargava;
Chundawat, Shishir P. S.;
Lang, Matthew J.

Publication type:

Article

Broad-spectrum ubiquitin/ubiquitin-like deconjugation activity of the rhizobial effector NopD from Bradyrhizobium (sp. XS1150).

Published in:

Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-06344-w

By:

Li, Ying;
Perez-Gil, Jordi;
Lois, L. Maria;
Varejão, Nathalia;
Reverter, David

Publication type:

Article

Specific DNMT3C flanking sequence preferences facilitate methylation of young murine retrotransposons.

Published in:

Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-06252-z

By:

Dossmann, Leonie;
Emperle, Max;
Dukatz, Michael;
de Mendoza, Alex;
Bashtrykov, Pavel;
Jeltsch, Albert

Publication type:

Article

Type III secretion system effector YfiD inhibits the activation of host poly(ADP-ribose) polymerase-1 to promote bacterial infection.

Published in:

Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-05852-z

By:

Zhou, Mengqing;
Liu, Yabo;
Zhang, Yibei;
Ma, Yue;
Zhang, Yuanxing;
Choi, Sang Ho;
Shao, Shuai;
Wang, Qiyao

Publication type:

Article

Atomistic ensemble of active SHP2 phosphatase.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05682-5

By:

Anselmi, Massimiliano;
Hub, Jochen S.

Publication type:

Article

Elucidating the Functions of Non-Coding RNAs from the Perspective of RNA Modifications.

Published in:

Non-Coding RNA, 2021, v. 7, n. 2, p. 1, doi. 10.3390/ncrna7020031

By:

Srikanth Garikipati, Venkata Naga;
Uchida, Shizuka

Publication type:

Article

MODIFIED PRESERVATION AND FUNGALYSIN DESCRIPTION FOR BATRACHOCHYTRIUM DENDROBATIDIS.

Published in:

Granja, de Ciencias de la Vida, 2022, v. 36, n. 2, p. 32, doi. 10.17163/lgr.n36.2022.03

By:

Lozano Camelo, Olga Cristina;
Rojas Arias, Adriana Carolina;
Ávila Méndez, Kelly Johanna;
López-Pazos, Silvio Alejandro

Publication type:

Article

Autokinase Activity of Casein Kinase 1 δ/ε Governs the Period of Mammalian Circadian Rhythms.

Published in:

Journal of Biological Rhythms, 2019, v. 34, n. 5, p. 482, doi. 10.1177/0748730419865406

By:

Guo, Gaili;
Wang, Kankan;
Hu, Shan-Shan;
Tian, Tian;
Liu, Peng;
Mori, Tetsuya;
Chen, Peng;
Johnson, Carl Hirschie;
Qin, Ximing

Publication type:

Article

Modelamiento in silico de la liasa organomercurial (MerB) de Pseudomonas fluorescens.

Published in:

Revista Colombiana de Química, 2022, v. 51, n. 1, p. 14, doi. 10.15446/rev.colomb.quim.v51n1.98381

By:

D-Kerynd, Barona;
Duverney, Gaviria

Publication type:

Article

Insights into Chitin-Degradation Potential of Shewanella khirikhana JW44 with Emphasis on Characterization and Function of a Chitinase Gene SkChi65.

Published in:

Microorganisms, 2024, v. 12, n. 4, p. 774, doi. 10.3390/microorganisms12040774

By:

Wang, Ling;
Xue, Ming;
Yan, Rui;
Xue, Jiawei;
Lu, Zhipeng;
Wen, Chongqing

Publication type:

Article

Chitinolytic Enzymes of the Hyperparasite Fungus Aphanocladium album : Genome-Wide Survey and Characterization of A Selected Enzyme.

Published in:

Microorganisms, 2023, v. 11, n. 5, p. 1357, doi. 10.3390/microorganisms11051357

By:

Leoni, Claudia;
Manzari, Caterina;
Chiara, Matteo;
Veronico, Pasqua;
Bruno, Giovanni Luigi;
Pesole, Graziano;
Ceci, Luigi R.;
Volpicella, Mariateresa

Publication type:

Article

Structure–Function Relationship Studies of Multidomain Levansucrases from Leuconostocaceae Family.

Published in:

Microorganisms, 2022, v. 10, n. 5, p. 889, doi. 10.3390/microorganisms10050889

By:

García-Paz, Flor de María;
Martínez-Bahena, Salvador;
Olvera, Clarita

Publication type:

Article

Mycobacterium bovis PknG R242P Mutation Results in Structural Changes with Enhanced Virulence in the Mouse Model of Infection.

Published in:

Microorganisms, 2022, v. 10, n. 4, p. N.PAG, doi. 10.3390/microorganisms10040673

By:

Oliveira, Fábio Muniz de;
Procopio, Victor Oliveira;
de Lima Menezes, Gabriela;
Silva, Roosevelt Alves da;
Kipnis, André;
Junqueira-Kipnis, Ana Paula

Publication type:

Article

Altering Tetrapyrrole Biosynthesis by Overexpressing Ferrochelatases (Fc1 and Fc2) Improves Photosynthetic Efficiency in Transgenic Barley.

Published in:

Agronomy, 2020, v. 10, n. 9, p. 1370, doi. 10.3390/agronomy10091370

By:

Nagahatenna, Dilrukshi S. K.;
Tiong, Jingwen;
Edwards, Everard J.;
Langridge, Peter;
Whitford, Ryan

Publication type:

Article

Activity-based CRISPR scanning uncovers allostery in DNA methylation maintenance machinery.

Published in:

eLife, 2023, p. 1, doi. 10.7554/eLife.80640

By:

Chun-Ho Ngan, Kevin;
Hoenig, Samuel M.;
Hui Si Kwok;
Lue, Nicholas Z.;
Gosavi, Pallavi M.;
Tanner, David A.;
Garcia, Emma M.;
Lee, Ceejay;
Liau, Brian B.

Publication type:

Article

Evidence linking APOBEC3B genesis and evolution of innate immune antagonism by gamma-herpesvirus ribonucleotide reductases.

Published in:

eLife, 2022, p. 1, doi. 10.7554/eLife.83893

By:

Moraes, Sofia N.;
Becker, Jordan T.;
Moghadasi, Seyed Arad;
Shaban, Nadine M.;
Auerbach, Ashley A.;
Cheng, Adam Z.;
Harris, Reuben S.

Publication type:

Article

Multiple ciliary localization signals control INPP5E ciliary targeting.

Published in:

eLife, 2022, p. 1, doi. 10.7554/eLife.78383

By:

Cilleros-Rodriguez, Dario;
Martin-Morales, Raquel;
Barbeito, Pablo;
Roy, Abhijit Deb;
Loukil, Abdelhalim;
Sierra-Rodero, Belen;
Herranz, Gonzalo;
Pampliega, Olatz;
Redrejo-Rodriguez, Modesto;
Goetz, Sarah C.;
Izquierdo, Manuel;
Inoue, Takanari;
Garcia-Gonzalo, Francesc R.

Publication type:

Article

Structure of Mycobacterium tuberculosis Cya, an evolutionary ancestor of the mammalian membrane adenylyl cyclases.

Published in:

eLife, 2022, p. 1, doi. 10.7554/eLife.77032

By:

Mehta, Ved;
Khanppnavar, Basavraj;
Schuster, Dina;
Kantarci, Ilayda;
Vercellino, Irene;
Kosturanova, Angela;
Iype, Tarun;
Stefanic, Sasa;
Picotti, Paola;
Korkhov, Volodymyr M.

Publication type:

Article

Structures of PKA-phospholamban complexes reveal a mechanism of familial dilated cardiomyopathy.

Published in:

eLife, 2022, p. 1, doi. 10.7554/eLife.75346

By:

Juan Qin;
Jingfeng Zhang;
Lianyun Lin;
Haji-Ghassemi, Omid;
Zhi Lin;
Woycechowsky, Kenneth J.;
Van Petegem, Filip;
Yan Zhang;
Zhiguang Yuchi

Publication type:

Article

An innovative cell model revealed the inhibitory effect of flavanone structure on peroxynitrite production through interaction with the IKKβ kinase domain at ATP binding site.

Published in:

Food Science & Nutrition, 2020, v. 8, n. 6, p. 2904, doi. 10.1002/fsn3.1591

By:

Charoensin, Supochana;
Huang, Tzou‐Chi;
Hsu, Jue‐Liang

Publication type:

Article

The Catalytic Domain of Neuropathy Target Esterase Influences Lipid Droplet Biogenesis and Lipid Metabolism in Human Neuroblastoma Cells.

Published in:

Metabolites (2218-1989), 2022, v. 12, n. 7, p. N.PAG, doi. 10.3390/metabo12070637

By:

He, Lin;
Huang, Feifei;
Wang, Yu;
Wu, Yijun;
Xu, Li;
Chang, Pingan

Publication type:

Article

Localization of the Catalytic Domain of Copepod Luciferases: Analysis of Truncated Mutants of the Metridia longa Luciferase.

Published in:

Life (2075-1729), 2023, v. 13, n. 5, p. 1222, doi. 10.3390/life13051222

By:

Markova, Svetlana V.;
Larionova, Marina D.;
Korotov, Igor A.;
Vysotski, Eugene S.

Publication type:

Article

HIV-1 Integrase Inhibitory Effects of Major Compounds Present in CareVid™: An Anti-HIV Multi-Herbal Remedy.

Published in:

Life (2075-1729), 2022, v. 12, n. 3, p. 417, doi. 10.3390/life12030417

By:

Rotich, Winnie;
Mas-Claret, Eduard;
Sadgrove, Nicholas;
Guantai, Anastasia;
Padilla-González, Guillermo F.;
Langat, Moses K.

Publication type:

Article

An Engineered Multimodular Enzybiotic against Methicillin-Resistant Staphylococcus aureus.

Published in:

Life (2075-1729), 2021, v. 11, n. 12, p. 1384, doi. 10.3390/life11121384

By:

Manoharadas, Salim;
Altaf, Mohammad;
Alrefaei, Abdulwahed Fahad;
Ahmad, Naushad;
Althaf Hussain, Shaik;
Al-Rayes, Basel F.

Publication type:

Article

Molecular characterization and expression analysis of double‐stranded RNA‐dependent protein kinase (PKR) in Dabry's sturgeon (Acipenser dabryanus).

Published in:

Journal of Applied Ichthyology, 2021, v. 37, n. 2, p. 169, doi. 10.1111/jai.14166

By:

Guo, Huizhi;
Chen, Dunxue;
Yuan, Hanwen;
Deng, Dan;
Han, Panpan;
Li, Qian;
Xu, Qiaoqing;
Wei, Qiwei

Publication type:

Article

Exploration of chlorophyll fluorescence characteristics gene regulatory in rice (Oryza sativa L.): a genome-wide association study.

Published in:

Frontiers in Plant Science, 2023, p. 01, doi. 10.3389/fpls.2023.1234866

By:

Sicheng Liu;
Zhuang Xiong;
Zuolin Zhang;
Youbo Wei;
Dongliang Xiong;
Fei Wang;
Jianliang Huang

Publication type:

Article

Polo-Like Kinase 2: From Principle to Practice.

Published in:

Frontiers in Oncology, 2022, v. 12, p. 1, doi. 10.3389/fonc.2022.956225

By:

Chuanyong Zhang;
Chuangye Ni;
Hao Lu

Publication type:

Article

Identifying Actionable Variants Using Capture-Based Targeted Sequencing in 563 Patients With Non-Small Cell Lung Carcinoma.

Published in:

Frontiers in Oncology, 2022, v. 12, p. 1, doi. 10.3389/fonc.2021.812433

By:

Jiang, Haiping;
Wang, Yinan;
Xu, Hanlin;
Lei, Wei;
Yu, Xiaoyun;
Tian, Haiying;
Meng, Cong;
Wang, Xueying;
Zhao, Zicheng;
Jin, Xiangfeng

Publication type:

Article

Revisiting the interaction between complement lectin pathway protease MASP-2 and SARS-CoV-2 nucleoprotein.

Published in:

Frontiers in Immunology, 2024, p. 1, doi. 10.3389/fimmu.2024.1419165

By:

Bally, Isabelle;
Drumont, Guillaume;
Rossi, Véronique;
Guseva, Serafima;
Botova, Maiia;
Reiser, Jean-Baptiste;
Thépaut, Michel;
Dylon, Sebastian Dergan;
Dumestre-Pérard, Chantal;
Gaboriaud, Christine;
Fieschi, Franck;
Blackledge, Martin;
Poignard, Pascal;
Thielens, Nicole M.

Publication type:

Article

Rational design of potent phosphopeptide binders to endocrine Snk PBD domain by integrating machine learning optimization, molecular dynamics simulation, binding energetics rescoring, and in vitro affinity assay.

Published in:

European Biophysics Journal, 2025, v. 54, n. 1, p. 33, doi. 10.1007/s00249-024-01729-5

By:

Wang, Zhaohui;
Lan, Jixiao;
Feng, Yan;
Chen, Yumei;
Chen, Meiyuan

Publication type:

Article

Two Novel CAPN5 Variants Associated with Mild and Severe Autosomal Dominant Neovascular Inflammatory Vitreoretinopathy Phenotypes.

Published in:

2019

By:

Randazzo, Nadia M.;
Shanks, Morag E.;
Clouston, Penny;
MacLaren, Robert E.;
Randazzo, Nadia M MBBCh, BSc(Hons);
Shanks, Morag E PhD;
Clouston, Penny PhD, FRCPath;
MacLaren, Robert E MB ChB, DPhil, FRCOphth

Publication type:

journal article

Elevated expression of the membrane-anchored serine protease TMPRSS11E in NSCLC progression.

Published in:

Carcinogenesis, 2022, v. 43, n. 11, p. 1092, doi. 10.1093/carcin/bgac069

By:

Li, Shufeng;
Chen, Zhenfa;
Zhang, Wei;
Wang, Ting;
Wang, Xihua;
Wang, Chao;
Chao, Jie;
Liu, Ling

Publication type:

Article

Development of a novel chimeric lysin to combine parental phage lysin and cefquinome for preventing sow endometritis after artificial insemination.

Published in:

Veterinary Research, 2025, v. 56, n. 1, p. 1, doi. 10.1186/s13567-025-01457-4

By:

Li, Xin-xin;
Hong, Zi-qiang;
Xiong, Zhi-xuan;
Zhang, Li-wen;
Wang, Shuang;
Tao, Pan;
Chen, Pin;
Li, Xiang-min;
Qian, Ping

Publication type:

Article

Cryo-EM structure of the botulinum neurotoxin A/SV2B complex and its implications for translocation.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-56304-z

By:

Khanppnavar, Basavraj;
Leka, Oneda;
Pal, Sushant K.;
Korkhov, Volodymyr M.;
Kammerer, Richard A.

Publication type:

Article

An inhibitory segment within G-patch activators tunes Prp43-ATPase activity during ribosome assembly.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-54584-5

By:

Portugal-Calisto, Daniela;
Geiger, Alexander Gregor;
Rabl, Julius;
Vadas, Oscar;
Oborská-Oplová, Michaela;
Mazur, Jarosław;
Richina, Federica;
Klingauf-Nerurkar, Purnima;
Michel, Erich;
Leitner, Alexander;
Boehringer, Daniel;
Panse, Vikram Govind

Publication type:

Article

PPP1R2 stimulates protein phosphatase-1 through stabilisation of dynamic subunit interactions.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-54256-4

By:

Lemaire, Sarah;
Ferreira, Mónica;
Claes, Zander;
Derua, Rita;
Lake, Madryn;
Van der Hoeven, Gerd;
Withof, Fabienne;
Cao, Xinyu;
Greiner, Elora C.;
Kettenbach, Arminja N.;
Van Eynde, Aleyde;
Bollen, Mathieu

Publication type:

Article

Structures of the human leading strand Polε–PCNA holoenzyme.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-52257-x

By:

He, Qing;
Wang, Feng;
Yao, Nina Y.;
O'Donnell, Michael E.;
Li, Huilin

Publication type:

Article

Structures of the human leading strand Polε–PCNA holoenzyme.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-52257-x

By:

He, Qing;
Wang, Feng;
Yao, Nina Y.;
O'Donnell, Michael E.;
Li, Huilin

Publication type:

Article