Works matching DE "CAENORHABDITIS elegans genetics"

Results: 273

A new way to visualize DNA's base succession: the Caenorhabditis elegans chromosome landscapes.

Published in:

2015

By:

Oueslati, Afef;
Messaoudi, Imen;
Lachiri, Zied;
Ellouze, Noureddine;
Oueslati, Afef Elloumi

Publication type:

journal article

Modulation of Caenorhabditis elegans immune response and modification of Shigella endotoxin upon interaction.

Published in:

Journal of Basic Microbiology, 2015, v. 55, n. 4, p. 432, doi. 10.1002/jobm.201400511

By:

Kesika, Periyanaina;
Prasanth, Mani Iyer;
Balamurugan, Krishnaswamy

Publication type:

Article

Inference of cellular level signaling networks using single-cell gene expression data in Caenorhabditis elegans reveals mechanisms of cell fate specification.

Published in:

Bioinformatics, 2017, v. 33, n. 10, p. 1528, doi. 10.1093/bioinformatics/btw796

By:

Xiao-Tai Huang;
Yuan Zhu;
Lai Hang Leanne Chan;
Zhongying Zhao;
Hong Yan

Publication type:

Article

Epigenetics: inheriting a long life.

Published in:

2011

By:

Muers, Mary

Publication type:

journal article

Functional genomics: the modENCODE guide to the genome.

Published in:

2011

By:

Muers, Mary

Publication type:

journal article

Gene regulation: A tiny missing link for regulatory networks.

Published in:

Nature Reviews Genetics, 2008, v. 9, n. 11, p. 813, doi. 10.1038/nrg2472

By:

Skipper, Magdalena

Publication type:

Article

microRNA regulation of the embryonic hypoxic response in Caenorhabditis elegans.

Published in:

Scientific Reports, 2015, p. 11284, doi. 10.1038/srep11284

By:

Kagias, Konstantinos;
Pocock, Roger

Publication type:

Article

Dissection of C. elegans behavioral genetics in 3-D environments.

Published in:

Scientific Reports, 2015, p. 9564, doi. 10.1038/srep09564

By:

Hwang, Ara B.;
Kwon, Namseop;
You, Young-Jai;
V. Lee, Seung-Jae;
Ho Je, Jung

Publication type:

Article

Loss-of-function of β-catenin bar-1 slows development and activates the Wnt pathway in Caenorhabditis elegans.

Published in:

Scientific Reports, 2014, p. 1, doi. 10.1038/srep04926

By:

van der Bent, M. Leontien;
Sterken, Mark G.;
Volkers, Rita J. M.;
Riksen, Joost A. G.;
Schmid, Tobias;
Hajnal, Alex;
Kammenga, Jan E.;
Snoek, L. Basten

Publication type:

Article

Transmissions of serotonin, dopamine, and glutamate are required for the formation of neurotoxicity from Al<sub>2</sub>O<sub>3</sub>-NPs in nematode Caenorhabditis elegans.

Published in:

Nanotoxicology, 2013, v. 7, n. 5, p. 1004, doi. 10.3109/17435390.2012.689884

By:

Li, Yinxia;
Yu, Shunhui;
Wu, Qiuli;
Tang, Meng;
Wang, Dayong

Publication type:

Article

Exploring Repetitive DNA Landscapes Using REPCLASS, a Tool That Automates the Classification of Transposable Elements in Eukaryotic Genomes.

Published in:

Genome Biology & Evolution, 2009, v. 1, p. 205, doi. 10.1093/gbe/evp023

By:

Feschotte, Cédric;
Keswani, Umeshkumar;
Ranganathan, Nirmal;
Guibotsy, Marcel L.;
Levine, David

Publication type:

Article

Compatibility between mitochondrial and nuclear genomes correlates with the quantitative trait of lifespan in Caenorhabditis elegans.

Published in:

Scientific Reports, 2015, p. 17303, doi. 10.1038/srep17303

By:

Zhu, Zuobin;
Lu, Qing;
Zeng, Fangfang;
Wang, Junjing;
Huang, Shi

Publication type:

Article

Lactic Acid Bacteria Protects Caenorhabditis elegans from Toxicity of Graphene Oxide by Maintaining Normal Intestinal Permeability under different Genetic Backgrounds.

Published in:

Scientific Reports, 2015, p. 17233, doi. 10.1038/srep17233

By:

Zhao, Yunli;
Yu, Xiaoming;
Jia, Ruhan;
Yang, Ruilong;
Rui, Qi;
Wang, Dayong

Publication type:

Article

The genetic basis and experimental evolution of inbreeding depression in Caenorhabditis elegans.

Published in:

Heredity, 2014, v. 112, n. 3, p. 248, doi. 10.1038/hdy.2013.100

By:

Chelo, I M;
Carvalho, S;
Roque, M;
Proulx, S R;
Teotónio, H

Publication type:

Article

Hidden variation mapped.

Published in:

Heredity, 2010, v. 105, n. 5, p. 423, doi. 10.1038/hdy.2010.99

By:

Duveau, F.;
F&;#x00E9;lix, M.-A.

Publication type:

Article

Cryptic intraspecific variation in sex determination in Caenorhabditis elegans revealed by mutations.

Published in:

Heredity, 2010, v. 105, n. 5, p. 473, doi. 10.1038/hdy.2010.62

By:

Chandler, C. H.

Publication type:

Article

Paths of Heritable Mitochondrial DNA Mutation and Heteroplasmy in Reference and gas-1 Strains of Caenorhabditis elegans.

Published in:

Frontiers in Genetics, 2016, p. 1, doi. 10.3389/fgene.2016.00051

By:

Wernick, Riana I.;
Estes, Suzanne;
Howe, Dana K.;
Denver, Dee R.

Publication type:

Article

Use of Caenorhabditis elegans as a model to study Alzheimer's disease and other neurodegenerative diseases.

Published in:

Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00279

By:

Alexander, Adanna G.;
Marfil, Vanessa;
Chris Li

Publication type:

Article

Examination of Exhaustive Cloning Attempts Reveals that C. elegans piRNAs, Transposons, and Repeat Sequences are Efficiently Cloned in Yeast, but not in Bacteria.

Published in:

Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00275

By:

Sagy, Or;
Shamir, Ron;
Rechavi, Oded

Publication type:

Article

Heterologous expression in Caenorhabditis elegans as an alternative approach to functional studies in Schistosoma mansoni.

Published in:

Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00120

By:

Gava, Sandra G.;
Scholte, Larissa L. S.;
Volpini, Angela;
Ol iveira, Riva de Paula;
Oliveira, Guilherme

Publication type:

Article

Streptothricin acetyl transferase 2 (Sat2): A dominant selection marker for Caenorhabditis elegans genome editing.

Published in:

PLoS ONE, 2018, v. 13, n. 5, p. 1, doi. 10.1371/journal.pone.0197128

By:

Obinata, Hiroyuki;
Sugimoto, Asako;
Niwa, Shinsuke

Publication type:

Article

HMP-1/α-catenin promotes junctional mechanical integrity during morphogenesis.

Published in:

PLoS ONE, 2018, v. 13, n. 2, p. 1, doi. 10.1371/journal.pone.0193279

By:

Vuong-Brender, Thanh Thi Kim;
Boutillon, Arthur;
Rodriguez, David;
Lavilley, Vincent;
Labouesse, Michel

Publication type:

Article

Functional analysis of the C. elegans cyld-1 gene reveals extensive similarity with its human homolog.

Published in:

PLoS ONE, 2018, v. 13, n. 2, p. 1, doi. 10.1371/journal.pone.0191864

By:

Hadweh, Paul;
Chaitoglou, Iro;
Gravato-Nobre, Maria Joao;
Ligoxygakis, Petros;
Mosialos, George;
Hatzivassiliou, Eudoxia

Publication type:

Article

Temporal dynamics of gene expression in heat-stressed Caenorhabditis elegans.

Published in:

PLoS ONE, 2017, v. 12, n. 12, p. 1, doi. 10.1371/journal.pone.0189445

By:

Jovic, Katharina;
Sterken, Mark G.;
Grilli, Jacopo;
Bevers, Roel P. J.;
Rodriguez, Miriam;
Riksen, Joost A. G.;
Allesina, Stefano;
Kammenga, Jan E.;
Snoek, L. Basten

Publication type:

Article

Neuronal aging: learning from C. elegans.

Published in:

Journal of Molecular Signaling, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1750-2187-8-14

By:

Chun-Hao Chen;
Yen-Chih Chen;
Hao-Ching Jiang;
Chung-Kuan Chen;
Chun-Liang Pan

Publication type:

Article

A synergistic approach towards understanding the functional significance of dopamine receptor interactions.

Published in:

Journal of Molecular Signaling, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1750-2187-8-13

By:

Pandey, Pratima;
Mersha, Mahlet D.;
Dhillon, Harbinder S.

Publication type:

Article

The yeast two-hybrid assay: still finding connections after 25 years.

Published in:

Nature Methods, 2014, v. 11, n. 12, p. 1203, doi. 10.1038/nmeth.3182

By:

Vidal, Marc;
Fields, Stanley

Publication type:

Article

Genetics: Interspecies systems biology (a.k.a. interspecies genetics).

Published in:

Nature Methods, 2014, v. 11, n. 4, p. 372, doi. 10.1038/nmeth.2917

By:

de Souza, Natalie

Publication type:

Article

Reference-free compression of high throughput sequencing data with a probabilistic de Bruijn graph.

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0709-7

By:

Benoit, Gaëtan;
Lemaitre, Claire;
Lavenier, Dominique;
Drezen, Erwan;
Dayris, Thibault;
Uricaru, Raluca;
Rizk, Guillaume

Publication type:

Article

An evidence-based approach to identify aging-related genes in Caenorhabditis elegans.

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0469-4

By:

Callahan, Alison;
Cifuentes, Juan José;
Dumontier, Michel

Publication type:

Article

An evidence-based approach to identify aging-related genes in Caenorhabditis elegans.

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0469-4

By:

Callahan, Alison;
Cifuentes, Juan José;
Dumontier, Michel

Publication type:

Article

Meiotic recombination modulates the structure and dynamics of the synaptonemal complex during C. elegans meiosis.

Published in:

PLoS Genetics, 2017, v. 13, n. 3, p. 1, doi. 10.1371/journal.pgen.1006670

By:

Pattabiraman, Divya;
Roelens, Baptiste;
Woglar, Alexander;
Villeneuve, Anne M.

Publication type:

Article

Age-Dependent Neuroendocrine Signaling from Sensory Neurons Modulates the Effect of Dietary Restriction on Longevity of Caenorhabditis elegans.

Published in:

PLoS Genetics, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pgen.1006544

By:

Fletcher, Marissa;
Kim, Dennis H.

Publication type:

Article

XRN2 Autoregulation and Control of Polycistronic Gene Expresssion in Caenorhabditis elegans.

Published in:

PLoS Genetics, 2016, v. 12, n. 9, p. 1, doi. 10.1371/journal.pgen.1006313

By:

Miki, Takashi S.;
Carl, Sarah H.;
Stadler, Michael B.;
Großhans, Helge

Publication type:

Article

Developmental Dynamics of X-Chromosome Dosage Compensation by the DCC and H4K20me1 in C. elegans.

Published in:

PLoS Genetics, 2015, v. 11, n. 12, p. 1, doi. 10.1371/journal.pgen.1005698

By:

Kramer, Maxwell;
Kranz, Anna-Lena;
Su, Amanda;
Winterkorn, Lara H.;
Albritton, Sarah Elizabeth;
Ercan, Sevinc

Publication type:

Article

Effect of mutation mechanisms on variant composition and distribution in Caenorhabditis elegans.

Published in:

PLoS Computational Biology, 2017, v. 13, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005369

By:

Hwang, Ho-Yon;
Wang, Jiou

Publication type:

Article

Direct Interaction between the WD40 Repeat Protein WDR-23 and SKN-1/Nrf Inhibits Binding to Target DNA.

Published in:

Molecular & Cellular Biology, 2014, v. 34, n. 16, p. 3156, doi. 10.1128/MCB.00114-14

By:

Chi K. Leung;
Koichi Hasegawa;
Ying Wang;
Deonarine, Andrew;
Lanlan Tang;
Miwa, Johji;
Choe, Keith P.

Publication type:

Article

HSF-1 is involved in regulation of ascaroside pheromone biosynthesis by heat stress in Caenorhabditis elegans.

Published in:

Biochemical Journal, 2016, v. 473, n. 6, p. 789, doi. 10.1042/BJ20150938

By:

Hyoe-Jin Joo;
Saeram Park;
Kwang-Youl Kim;
Mun-Young Kim;
Heekyeong Kim;
Donha Park;
Young-Ki Paik

Publication type:

Article

Loss of DNase II function in the gonad is associated with a higher expression of antimicrobial genes in Caenorhabditis elegans.

Published in:

Biochemical Journal, 2015, v. 470, n. 1, p. 145, doi. 10.1042/BJ20150563

By:

Hsiang Yu;
Huey-Jen Lai;
Tai-Wei Lin;
Chang-Shi Chen;
Lo, Szecheng J.

Publication type:

Article

Solution structures and dynamics of ADF/cofilins UNC-60A and UNC-60B from Caenorhabditis elegans.

Published in:

Biochemical Journal, 2015, v. 465, n. 1, p. 63, doi. 10.1042/BJ20140923

By:

Shukla, Vaibhav Kumar;
Kabra, Ashish;
Maheshwari, Diva;
Yadav, Rahul;
Jain, Anupam;
Tripathi, Sarita;
Ono, Shoichiro;
Kumar, Dinesh;
Arora, Ashish

Publication type:

Article

Structure of RDE-4 dsRBDs and mutational studies provide insights into dsRNA recognition in the Caenorhabditis elegans RNAi pathway.

Published in:

Biochemical Journal, 2014, v. 458, n. 1, p. 119, doi. 10.1042/BJ20131347

By:

CHILIVERI, Sai Chaitanya;
DESHMUKH, Mandar V.

Publication type:

Article

The FMRFamide- like peptide family in nematodes.

Published in:

Frontiers in Endocrinology, 2014, v. 5, p. 1, doi. 10.3389/fendo.2014.00090

By:

Peymen, Katleen;
Watteyne, Jan;
Frooninckx, Lotte;
Schoofs, Liliane;
Beets, Isabel

Publication type:

Article

Transcriptional effects of gene dose reduction.

Published in:

Biology of Sex Differences, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2042-6410-5-5

By:

Zhen-Xia Chen;
Golovnina, Kseniya;
Sultana, Hina;
Kumar, Satish;
Oliver, Brian

Publication type:

Article

Linking dosage compensation and X chromosome nuclear organization in C. elegans.

Published in:

Nucleus (1949-1034), 2015, v. 6, n. 4, p. 266, doi. 10.1080/19491034.2015.1059546

By:

Sharma, Rahul;
Meister, Peter

Publication type:

Article

Unusual DNA packaging characteristics in endoreduplicated Caenorhabditis elegans oocytes defined by in vivo accessibility to an endogenous nuclease activity.

Published in:

Epigenetics & Chromatin, 2013, v. 6, n. 1, p. 2, doi. 10.1186/1756-8935-6-37

By:

Gu, Sam Guoping;
Goszczynski, Barbara;
McGhee, James D.;
Fire, Andrew Z.

Publication type:

Article

Using C. elegans Forward and Reverse Genetics to Identify New Compounds with Anthelmintic Activity.

Published in:

PLoS Neglected Tropical Diseases, 2016, v. 10, n. 10, p. 1, doi. 10.1371/journal.pntd.0005058

By:

Mathew, Mark D.;
Mathew, Neal D.;
Miller, Angela;
Simpson, Mike;
Au, Vinci;
Garland, Stephanie;
Gestin, Marie;
Edgley, Mark L.;
Flibotte, Stephane;
Balgi, Aruna;
Chiang, Jennifer;
Giaever, Guri;
Dean, Pamela;
Tung, Audrey;
Roberge, Michel;
Roskelley, Calvin;
Forge, Tom;
Nislow, Corey;
Moerman, Donald

Publication type:

Article

Think globally, act locally.

Published in:

Nature Genetics, 2007, v. 39, n. 3, p. 287, doi. 10.1038/ng0307-287

By:

Reinke, Valerie

Publication type:

Article

Genomic identification and functional analysis of essential genes in Caenorhabditis elegans.

Published in:

BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-5251-3

By:

Chaoran Zheng;
Zixin Deng;
Shicheng Yu;
Fan Zhou;
Jeffrey Shih-Chieh Chu;
Baillie, David L.;
Rose, Ann M.

Publication type:

Article

Disruption of the Caenorhabditis elegans Integrator complex triggers a non-conventional transcriptional mechanism beyond snRNA genes.

Published in:

PLoS Genetics, 2019, v. 15, n. 2, p. 1, doi. 10.1371/journal.pgen.1007981

By:

Gómez-Orte, Eva;
Sáenz-Narciso, Beatriz;
Zheleva, Angelina;
Ezcurra, Begoña;
de Toro, María;
López, Rosario;
Gastaca, Irene;
Nilsen, Hilde;
Sacristán, María P.;
Schnabel, Ralf;
Cabello, Juan

Publication type:

Article

A DNA repair protein and histone methyltransferase interact to promote genome stability in the Caenorhabditis elegans germ line.

Published in:

PLoS Genetics, 2019, v. 15, n. 2, p. 1, doi. 10.1371/journal.pgen.1007992

By:

Yang, Bing;
Xu, Xia;
Russell, Logan;
Sullenberger, Matthew T.;
Yanowitz, Judith L.;
Maine, Eleanor M.

Publication type:

Article