Works matching DE "BIOINFORMATICS"

Results: 5000

Prognostic impact of caspase‐8 mutation in oral cavity squamous cell carcinoma.

Published in:

Oral Diseases, 2025, v. 31, n. 3, p. 769, doi. 10.1111/odi.15124

By:

Lu, Hsueh‐Ju;
Su, Chun‐Wen;
Su, Shih‐Chi;
Chang, Lun‐Ching;
Wu, Ming‐Fang;
Lin, Chiao‐Wen;
Yang, Shun‐Fa

Publication type:

Article

Identification of endogenous agonists of extra‐oral bitter taste receptors.

Published in:

Lebensmittelchemie, 2025, v. 79, p. S2-114, doi. 10.1002/lemi.202552251

By:

Ziegler, Florian;
Behrens, Maik;
Schwab, Wilfried

Publication type:

Article

The immune landscape of human tumors.

Published in:

OncoImmunology, 2014, v. 3, n. 2, p. N.PAG, doi. 10.4161/onci.27456

By:

Bindea, Gabriela;
Mlecnik, Bernhard;
Angell, Helen K;
Galon, Jérôme

Publication type:

Article

Clustering of self-organizing map identifies five distinct medulloblastoma subgroups.

Published in:

Cancer Biomarkers, 2016, v. 16, n. 3, p. 327, doi. 10.3233/CBM-160570

By:

Changjun Cao;
Wei Wang;
Pucha Jiang

Publication type:

Article

Down-regulation of LXR/RXR activation and negative acute phase response pathways in colon adenocarcinoma revealed by proteomics and bioinformatics analysis.

Published in:

Cancer Biomarkers, 2014, v. 14, n. 5, p. 313, doi. 10.3233/CBM-140409

By:

Tang, Hui;
Mirshahidi, Saied;
Senthil, Maheswari;
Kazanjian, Kevork;
Chen, Chien-Shing;
Zhang, Kangling

Publication type:

Article

Systems biology of cancer biomarker detection.

Published in:

Cancer Biomarkers, 2013, v. 13, n. 4, p. 201, doi. 10.3233/CBM-130363

By:

Mitra, Sanga;
Das, Smarajit;
Chakrabarti, Jayprokas

Publication type:

Article

Bioinformatics: Biomarkers of early detection.

Published in:

Cancer Biomarkers, 2011, v. 9, n. 1-6, p. 511

By:

Srivastava, Sudhir;
Grizzle, William E.;
Crichton, Daniel J.;
Mattmann, Chris A.;
Thornquist, Mark;
Anton, Kristen;
Hughes, J. Steven

Publication type:

Article

Molecular profiling of triple negative breast cancer.

Published in:

Breast Disease, 2011, v. 32, n. 1/2, p. 73, doi. 10.3233/BD-2010-0314

By:

Eng-Wong, Jennifer;
Zujewski, Jo Anne;
Ma, Cynthia X.;
Luo, Jingqin;
Ellis, Matthew J.

Publication type:

Article

Sphingolipid metabolism-related genes for the diagnosis of metabolic syndrome by integrated bioinformatics analysis and Mendelian randomization identification.

Published in:

Diabetology & Metabolic Syndrome, 2025, v. 17, n. 1, p. 1, doi. 10.1186/s13098-025-01803-8

By:

Li, Weidong;
Zhong, Qixing;
Deng, Naisheng;
Zhou, Xinhao;
Wang, Haitao;
Ouyang, Jun;
Guan, Zhifen;
Cheng, Bohao;
Xiang, Lijun;
Huang, Yueming;
Wang, Yao

Publication type:

Article

Tobacco carcinogen NNK promotes pancreatic cancer proliferation via LINC00857/β-catenin.

Published in:

Tobacco Induced Diseases, 2025, v. 23, p. 1, doi. 10.18332/tid/203455

By:

Zhou, Cancan;
Cao, Ruiqi;
Wang, Qiqi;
Mo, Jiantao;
Qian, Weikun;
Feng, Zhengyuan;
Zhang, Shengzhan;
Chen, Xin;
Hao, Jie;
Ma, Qingyong;
Wu, Zheng;
Wang, Zheng

Publication type:

Article

Bioinformatics-based identification of key genes for Olaparib resistance in breast cancer: prognostic implications and therapeutic relevance.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02989-z

By:

Shen, Kezhen;
Li, Xiaozhe;
Zhao, Sihan;
Zhang, Xinyu;
Yu, Le;
Li, Jun;
Cai, Lei

Publication type:

Article

Identification of Quercetin as a Natural MMP1 Inhibitor for Overcoming Cisplatin Resistance in Epithelial Ovarian Cancer.

Published in:

Journal of Cancer, 2025, v. 16, n. 8, p. 2578, doi. 10.7150/jca.110517

By:

Shubo Wang;
Ziming Zhao;
Lili Yu;
Jue Wang;
Yue Ouyang;
Hua Zhou;
Weixing Shen;
Qibiao Wu

Publication type:

Article

Integrating multi-omics to unveil PSMD12 as a critical gene in promoting brain metastases of lung adenocarcinoma.

Published in:

Journal of Translational Medicine, 2025, v. 23, n. 1, p. 1, doi. 10.1186/s12967-025-06680-3

By:

Li, Xin;
Zhang, Juxuan;
Zhang, Meng;
Jiang, Wenbin;
Jia, Dexin;
Wang, Ruxiong;
Li, Hao;
Wang, Zhihui;
Liu, Yixin;
Tang, Lefan;
Deng, Jiaxing;
Zhao, Wenyuan;
Yu, Yan;
Liu, Shilong;
Qi, Lishuang

Publication type:

Article

Deciphering the relationship between sarcopenia and aging: A combined text mining and bioinformatics approach.

Published in:

Geriatrics & Gerontology International, 2025, v. 25, n. 6, p. 806, doi. 10.1111/ggi.70042

By:

Kamihara, Takahiro;
Omura, Takuya;
Shimizu, Atsuya

Publication type:

Article

Correction: Sepsis-related immune signature C3 in endometrial carcinoma: implications for prognosis, tumor progression through bioinformatics and experimental validation.

Published in:

2025

By:

Kulsoom;
Ali, Wajahat;
Ahmad, Saleem;
Khan, Irfan Ali;
Soni, Tanveen Kaur;
Masood, Asia;
Iqbal, Muhammad Omer;
uglu, Valisher Sapayev Odilbek;
Djumaniyazova, Mukhayya Xusinovna;
Cholavaram, Anas Sameed;
Abdulrahmon, Mubaraq Arisekola

Publication type:

Correction Notice

Reactive Oxygen Species (ROS) and Their Profound Influence on Regulating Diverse Aspects of Cancer: A Concise Review.

Published in:

Drug Development Research, 2025, v. 86, n. 4, p. 1, doi. 10.1002/ddr.70107

By:

Tiwari, Rachana;
Mondal, Ysani;
Bharadwaj, Khyathi;
Mahajan, Mohita;
Mondal, Sukanta;
Sarkar, Angshuman

Publication type:

Article

Shared Genetic Characteristics of Coronary Artery Disease and Peripheral artery Disease: Insights From Integrated Bioinformatics Analysis of RNA-Sequencing Data.

Published in:

Bioinformatics & Biology Insights, 2025, p. 1, doi. 10.1177/11779322251344123

By:

Nawabi, Abdul Qadir;
Chen, Lijuan

Publication type:

Article

Evaluating Semi-Markov Processes and Other Epidemiological Time-to-Event Models by Computing Disease Sojourn Density as Partial Differential Equations.

Published in:

Medical Decision Making, 2025, v. 45, n. 5, p. 569, doi. 10.1177/0272989X251333398

By:

Worthington, Joachim;
Feletto, Eleonora;
He, Emily;
Wade, Stephen;
de Graaff, Barbara;
Nguyen, Anh Le Tuan;
George, Jacob;
Canfell, Karen;
Caruana, Michael

Publication type:

Article

Therapeutic potential of miR-204-5p in intervertebral disc degeneration: targeting the SSRP1/NF-κB pathway to inhibit apoptosis.

Published in:

Journal of Orthopaedic Surgery & Research, 2025, v. 20, n. 1, p. 1, doi. 10.1186/s13018-025-05999-3

By:

Zhao, Chenhao;
Li, Qiuwei;
Shen, Cailiang

Publication type:

Article

Biological Network Analysis of Genes and Non-coding RNAs in Polycystic Ovary Syndrome.

Published in:

Cyprus Journal of Medical Sciences, 2025, v. 10, p. 1, doi. 10.4274/cjms.2025.2024-131

By:

Hasanzadeh, Bita Ostad;
Hasanzadeh, Parham Ostad;
Tulay, Pınar

Publication type:

Article

Single cell analysis and bioinformatics reveal pyroptosis mechanisms in hepatocellular carcinoma.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02907-3

By:

Luo, Wei;
JunxiaWang;
Wang, Hongfei;
Liu, Fei;
Yang, Taiwei;
Wu, Zhongjun;
Guo, Wubin

Publication type:

Article

LMNB1 regulates breast cancer cell senescence and migration through PPAR signaling pathway.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02709-7

By:

Meng, Shaoda;
Liu, Sicheng;
Liu, Chunsheng;
Yang, Kunxian;
Lai, Minghua

Publication type:

Article

Identification of biomarkers associated with exhausted CD8 + T cells in the tumor microenvironment of intrahepatic cholangiocarcinoma based on Mendelian randomization and bioinformatics analysis.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02970-w

By:

Feng, LiuXing;
Yuan, Quan;
Yu, Hao;
Ye, RongJie;
Xie, ZhenHao;
Xu, JiaHuan;
Li, XiuDong;
Wang, ShuangJia

Publication type:

Article

Current situation and challenges of tumor biotherapy based on alternative splicing.

Published in:

Chinese Journal of Cancer Biotherapy, 2025, v. 32, n. 4, p. 347, doi. 10.3872/j.issn.1007-385x.2025.04.001

By:

CUI Mengmeng;
LIU Shuxun;
YU Yizhi

Publication type:

Article

A Review of In Silico Approaches for Discovering Natural Viral Protein Inhibitors in Aquaculture Disease Control.

Published in:

Journal of Fish Diseases, 2025, v. 48, n. 7, p. 1, doi. 10.1111/jfd.14120

By:

Khang, Luu Tang Phuc;
Dinh‐Hung, Nguyen;
Islam, Sk Injamamul;
Dwinanti, Sefti Heza;
Mwamburi, Samuel Mwakisha;
Permpoonpattana, Patima;
Linh, Nguyen Vu

Publication type:

Article

The role and mechanism of CRISPLD2 in skin fibrosis of systemic sclerosis.

Published in:

Rheumatology, 2025, v. 64, n. 5, p. 3134, doi. 10.1093/rheumatology/keae541

By:

Ding, Liqing;
Bao, Ding;
Dai, Bingying;
Meng, Qiming;
Lv, Chunliu;
Luo, Hui;
Zhu, Honglin

Publication type:

Article

ADAM32 Oncogene in Hepatoblastoma Is Regulated by IGF2BP2.

Published in:

Cancers, 2025, v. 17, n. 11, p. 1772, doi. 10.3390/cancers17111772

By:

Fukazawa, Takahiro;
Tanimoto, Keiji;
Kojima, Masato;
Kanawa, Masami;
Hirohashi, Nobuyuki;
Hiyama, Eiso

Publication type:

Article

In Search of Healthy Ageing: A Microbiome-Based Precision Nutrition Approach for Type 2 Diabetes Prevention.

Published in:

Nutrients, 2025, v. 17, n. 11, p. 1877, doi. 10.3390/nu17111877

By:

González, Adriana;
Fullaondo, Asier;
Odriozola, Adrian

Publication type:

Article

The Gut Microbiota in Young Adults with High-Functioning Autism Spectrum Disorder and Its Performance as Diagnostic Biomarkers.

Published in:

Nutrients, 2025, v. 17, n. 11, p. 1748, doi. 10.3390/nu17111748

By:

Ying, Jiangbo;
Xu, Xinran;
Zhou, Ruwen;
Chung, Arthur C. K.;
Ng, Siu Kin;
Fan, Xiuyi;
Subramaniam, Mythily;
Wong, Sunny H.

Publication type:

Article

Multi-omics analysis of tumor necrosis factor superfamily 4 reveals its prognostic value with T cell exhaustion feature in cancer.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02666-1

By:

Lei, Kai;
Chen, Weiqing;
Wang, Anqi;
Zeng, Anyu;
Ding, Yun;
Luo, Tianqi;
Zhou, Qi

Publication type:

Article

TCF19 expression and significance analysis in breast cancer: integrated bioinformatics analysis and histological validation.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02546-8

By:

Yu, Haiyang;
Wei, Jingjing;
Chen, Qinhao;
Pan, Yueyin;
Qian, Xiaojun;
Pan, Jing;
Sun, Yubei

Publication type:

Article

Reanalysis of Exome Sequencing Data in the Indian Undiagnosed Diseases Program: Improving Diagnostic Yield and Ending Diagnostic Odyssey.

Published in:

Clinical Genetics, 2025, v. 107, n. 6, p. 620, doi. 10.1111/cge.14694

By:

Garg, Neha;
Lakshmi, Pragna;
Singh, Suzena M.;
Kulshreshta, Samarth;
Ranganath, Prajnya;
Moirangthem, Amita;
Dalal, Ashwin;
Gahlot, Aakanksha;
Puri, Ratna Dua

Publication type:

Article

Improved Diagnostic Yield in Recessive Intellectual Disability Utilizing Systematic Whole Exome Sequencing Data Reanalysis.

Published in:

Clinical Genetics, 2025, v. 107, n. 6, p. 612, doi. 10.1111/cge.14692

By:

Fattahi, Zohreh;
Shokouhian, Ebrahim;
Peymani, Fatemeh;
Babanejad, Mojgan;
Beheshtian, Maryam;
Edizadeh, Masoud;
Molaei, Negar;
Alagha, Parnian;
Ghodratpour, Fatemeh;
Keshavarzi, Fatemeh;
Moghadam, Masoumeh Goleyjani;
Arzhangi, Sanaz;
Kahrizi, Kimia;
Najmabadi, Hossein

Publication type:

Article

Restoration of gut microbiota with a specific synbiotic-containing infant formula in healthy Chinese infants born by cesarean section.

Published in:

European Journal of Clinical Nutrition, 2025, v. 79, n. 6, p. 567, doi. 10.1038/s41430-025-01571-8

By:

Wang, Ying;
Wopereis, Harm;
Kakourou, Alexia;
Liu, Min;
Wu, Jieling;
Li, Zailing;
Zhang, Lili;
Tan, Meizhen;
Low, June Su Yin;
Liu, Mengjin;
Roeselers, Guus;
Knol, Jan;
Cai, Wei

Publication type:

Article

Electroacupuncture attenuates bone erosion and promotes macrophage polarization in a mouse model of collagen-induced arthritis.

Published in:

Acupuncture in Medicine, 2025, v. 43, n. 3, p. 150, doi. 10.1177/09645284251331991

By:

Dong, Shi-Ying;
Zhou, Ying;
Wang, Xiao-Chi;
Du, Zhong-Heng;
Ye, Tian-Shen

Publication type:

Article

SinoMedminer: an R package and shiny application for mining and visualizing traditional Chinese medicine herbal formulas.

Published in:

Chinese Medicine, 2025, v. 20, n. 1, p. 1, doi. 10.1186/s13020-025-01127-9

By:

Dan, Wenchao;
Guo, Xinyuan;
Zhang, Guangzhong;
Zhang, Hui;
Liu, Jin;
Li, Qiushuang;
Chen, Yang;
He, Qingyong

Publication type:

Article

GCNT3 Promotes Hepatocellular Carcinoma Progression and EMT by Activating the PI3K/AKT Pathway.

Published in:

Biochemical Genetics, 2025, v. 63, n. 3, p. 2423, doi. 10.1007/s10528-024-10830-5

By:

Wang, Yadong;
Fang, Xiaosan;
Xie, Hao;
Wang, Xiaoming

Publication type:

Article

Exploring the dynamic landscape of immunopeptidomics: Unravelling posttranslational modifications and navigating bioinformatics terrain.

Published in:

Mass Spectrometry Reviews, 2025, v. 44, n. 4, p. 599, doi. 10.1002/mas.21905

By:

Flender, Daniel;
Vilenne, Frédérique;
Adams, Charlotte;
Boonen, Kurt;
Valkenborg, Dirk;
Baggerman, Geert

Publication type:

Article

Causal relationships between immune cell subtypes and risk of Pneumocystis pneumonia and lung cancer: a Mendelian randomization study.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02875-8

By:

Tian, Zhongqiu;
Tang, Wenfang;
Wen, Long;
He, Zhixiong;
Fang, Yanyan;
Fan, Yubin;
Peng, Yan;
Xu, Linyan;
Li, Bin;
Chen, Xuelian

Publication type:

Article

Astragalus polysaccharide protects against cardiac injury in a tnnt2a mutant zebrafish model of dilated cardiomyopathy.

Published in:

BMC Complementary Medicine & Therapies, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12906-025-04925-8

By:

Zhou, Chang;
Zhao, Hui;
Peng, Longping;
Dong, Yidan;
Wu, Qiong;
Wang, Xu;
Xu, Yingjia;
Wang, Youhua

Publication type:

Article

Effects of hybridization and gene flow on gene co-expression networks.

Published in:

Genetics, 2025, v. 230, n. 2, p. 1, doi. 10.1093/genetics/iyaf057

By:

Runghen, Rogini;
Bolnick, Daniel I

Publication type:

Article

Integrated bioinformatics and functional studies identify CDK9 as a potential prognostic biomarker and therapeutic target in AML.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02841-4

By:

Xie, Zhibin;
Xia, Yang;
Li, Zhongyu;
Zhang, Mengmeng;
Tan, Yuanyuan;
Han, Yuqing;
Wang, Meng;
Zhang, Pingping;
Li, Jiajia

Publication type:

Article

Shared hub genes in membranous nephropathy and kidney renal clear cell carcinoma: investigating molecular overlap and tumor progression.

Published in:

Discover Oncology, 2025, v. 16, n. 1, p. 1, doi. 10.1007/s12672-025-02701-1

By:

Hui, Peng;
Shuwen, Zhang

Publication type:

Article

Regenerative Potential of PDL‐Derived Small Extracellular Vesicles.

Published in:

Journal of Periodontal Research, 2025, v. 60, n. 4, p. 392, doi. 10.1111/jre.13356

By:

Birjandi, Anahid A.;
Lynham, Steven;
Matalova, Eva;
Ghuman, Mandeep;
Sharpe, Paul

Publication type:

Article

Transcriptome Analysis of Porphyromonas gingivalis Lipopolysaccharide‐Induced Early Gene Expression in Human Gingival Keratinocytes.

Published in:

Journal of Periodontal Research, 2025, v. 60, n. 4, p. 380, doi. 10.1111/jre.13353

By:

Ostadkarampour, Mahyar;
Putnins, Edward E.

Publication type:

Article

Neues Massenphänomen?

Published in:

Trillium-Diagnostik, 2025, v. 23, n. 2, p. 91

By:

Pfeiff, Brigitte

Publication type:

Article

Therapeutic effects of Erythrina variegata on primary dysmenorrhea and endometriosis: An in silico analysis.

Published in:

Indian Journal of Experimental Biology, 2025, v. 63, n. 5, p. 425, doi. 10.56042/ijeb.v63i05.14540

By:

M., Sneha;
R., Preyenga;
B., Kayalvizhi

Publication type:

Article

Study on DNA Damage Gene in Spermatogonial Stem Cells from Idiopathic Nonobstructive Azoospermia: A Bioinformatics Investigation Based on scRNA-seq Data.

Published in:

Cytogenetic & Genome Research, 2025, v. 165, n. 1, p. 9, doi. 10.1159/000545275

By:

Wang, Yi;
Weng, Yiming;
Wang, Yanqiu;
Xiang, Jun;
Le, Wei

Publication type:

Article

Machine Learning Assessment of Gestational Age in Accelerated Maturation, Delayed Maturation, Villous Edema, Chorangiosis, and Intrauterine Fetal Demise.

Published in:

Archives of Pathology & Laboratory Medicine, 2025, v. 149, n. 6, p. 503, doi. 10.5858/arpa.2024-0274-OA

By:

Goldstein, Jeffery A.;
Nateghi, Ramin;
Cooper, Lee A. D.

Publication type:

Article

Identification of biomarkers and immune infiltration associated with sexes in SSc: a bioinformatics and machine learning.

Published in:

Rheumatology, 2025, v. 64, n. 6, p. 3806, doi. 10.1093/rheumatology/keaf134

By:

Tian, Yi'an;
Chen, Shuyu;
Yu, Bingrui;
Chen, Yu;
Jia, Siyuan;
Wang, Huifang;
Zhu, Li;
Tian, Zhaofang

Publication type:

Article