Works matching DE "BACTERIOPHAGE genomes"

Results: 32

Globally distributed bacteriophage genomes reveal mechanisms of tripartite phage–bacteria–coral interactions.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2024, v. 18, n. 1, p. 1, doi. 10.1093/ismejo/wrae132

By:

Wallace, Bailey A;
Varona, Natascha S;
Hesketh-Best, Poppy J;
Stiffler, Alexandra K;
Silveira, Cynthia B

Publication type:

Article

Abstracts of the European Helicobacter Study Group XXVIth International Workshop on Helicobacter and Related Bacteria in Chronic Digestive Inflammation and Gastric Cancer.

Published in:: Helicobacter, 2013, v. 18, p. 77, doi. 10.1111/hel.12079
Publication type:: Article

Inherited Variation in Vitamin D Genes and Type 1 Diabetes Predisposition.

Published in:

Genes, 2017, v. 8, n. 4, p. 125, doi. 10.3390/genes8040125

By:

Penna-Martinez, Marissa;
Badenhoop, Klaus

Publication type:

Article

In vitro characterization of PlyE146, a novel phage lysin that targets Gram-negative bacteria.

Published in:

PLoS ONE, 2018, v. 13, n. 2, p. 1, doi. 10.1371/journal.pone.0192507

By:

Larpin, Yu;
Oechslin, Frank;
Moreillon, Philippe;
Resch, Grégory;
Entenza, José Manuel;
Mancini, Stefano

Publication type:

Article

Characterization of 4 T1-like lytic bacteriophages that lyse Shiga-toxin Escherichia coli O157:H7.

Published in:

Canadian Journal of Microbiology, 2012, v. 58, n. 7, p. 923, doi. 10.1139/w2012-063

By:

Niu, Yan D.;
Stanford, Kim;
Ackermann, Hans-W.;
McAllister, Tim A.

Publication type:

Article

Metagenomics of rumen bacteriophage from thirteen lactating dairy cattle.

Published in:

BMC Microbiology, 2013, v. 13, n. 1, p. 1, doi. 10.1186/1471-2180-13-242

By:

Ross, Elizabeth M.;
Petrovski, Steve;
Moate, Peter J.;
Hayes, Ben J.

Publication type:

Article

Non-contiguous finished genome sequence and description of Bacillus massilioanorexius sp. nov.

Published in:

Standards in Genomic Sciences, 2013, v. 8, n. 3, p. 465, doi. 10.4056/sigs.4087826

By:

Mishra, Ajay;
Pfleiderer, Anne;
Lagier, Jean-Christophe;
Robert, Catherine;
Raoult, Didier;
Fournier, Pierre-Edouard

Publication type:

Article

First genome sequences of Achromobacter phages reveal new members of the N4 family.

Published in:

Virology Journal, 2014, v. 11, n. 1, p. 1, doi. 10.1186/1743-422X-11-14

By:

Wittmann, Johannes;
Dreiseikelmann, Brigitte;
Rohde, Manfred;
Meier-Kolthoff, Jan P.;
Bunk, Boyke;
Rohde, Christine

Publication type:

Article

Characterization and determination of holin protein of Streptococcus suis bacteriophage SMP in heterologous host.

Published in:: Virology Journal, 2012, v. 9, n. 1, p. 70, doi. 10.1186/1743-422X-9-70
Publication type:: Article

The genome and proteome of a Campylobacter coli bacteriophage vB_CcoM-IBB_35 reveal unusual features.

Published in:: Virology Journal, 2012, v. 9, n. 1, p. 35, doi. 10.1186/1743-422X-9-35
Publication type:: Article

Genomes of the T4-related bacteriophages as windows on microbial genome evolution.

Published in:

Virology Journal, 2010, v. 7, p. 292, doi. 10.1186/1743-422X-7-292

By:

Petrov, Vasiliy M.;
Ratnayaka, Swarnamala;
Nolan, James M.;
Miller, Eric S.;
Karam, Jim D.

Publication type:

Article

Aligning the unalignable: bacteriophage whole genome alignments.

Published in:

BMC Bioinformatics, 2016, v. 17, p. 1, doi. 10.1186/s12859-015-0869-5

By:

Bérard, Sèverine;
Chateau, Annie;
Pompidor, Nicolas;
Guertin, Paul;
Bergeron, Anne;
Swenson, Krister M.

Publication type:

Article

Characterization and Complete Genome Sequence of a Novel Siphoviridae Bacteriophage BS5.

Published in:

Current Microbiology, 2017, v. 74, n. 7, p. 815, doi. 10.1007/s00284-017-1221-2

By:

Meng, Xue;
Wang, Min;
You, Siyuan;
Wang, Duobing;
Li, Yan;
Liu, Zhaoyang;
Gao, Yu;
Liu, Lu;
Zhang, Yaoyuan;
Yan, Zhenghao;
Liu, Chunyan;
Jiang, Yong;
Shao, Hongbing

Publication type:

Article

Complete Genome of a Novel Pseudoalteromonas Phage PHq0.

Published in:

Current Microbiology, 2016, v. 72, n. 1, p. 81, doi. 10.1007/s00284-015-0919-2

By:

Wang, Duo-bing;
Li, Yan;
Sun, Meng-qi;
Huang, Jin-peng;
Shao, Hong-bing;
Xin, Qi-lin;
Wang, Min

Publication type:

Article

Characterization of the Proteins Associated with Caulobacter crescentus Bacteriophage CbK Particles.

Published in:

Current Microbiology, 2016, v. 72, n. 1, p. 75, doi. 10.1007/s00284-015-0922-7

By:

Callahan, Courtney;
Wilson, Kiesha;
Ely, Bert

Publication type:

Article

Molecular identification and resistance investigation of atrazine degrading bacteria in the sediments of Karun River, Ahvaz, Iran.

Published in:

Microbiology (00262617), 2015, v. 84, n. 4, p. 531, doi. 10.1134/S0026261715040098

By:

Kafilzadeh, Farshid;
Farhadi, Niloufar

Publication type:

Article

Solving gap metabolites and blocked reactions in genome-scale models: application to the metabolic network of Blattabacterium cuenoti.

Published in:

BMC Systems Biology, 2013, v. 7, n. 1, p. 2, doi. 10.1186/1752-0509-7-114

By:

Ponce-de-Léon, Miguel;
Montero, Francisco;
Peretó, Juli

Publication type:

Article

Insights from the Genome Sequence of Acidovorax citrulli M6, a Group I Strain of the Causal Agent of Bacterial Fruit Blotch of Cucurbits.

Published in:

Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00430

By:

Eckshtain-Levi, Noam;
Walcott, Ron;
Burdman, Saul;
Shkedy, Dafna;
Gershovits, Michael;
Da Silva, Gustavo M.;
Tamir-Ariel, Dafna;
Pupko, Tal

Publication type:

Article

Genetic Evidence for O-Specific Antigen as Receptor of Pseudomonas aeruginosa Phage K8 and Its Genomic Analysis.

Published in:

Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00252

By:

Xuewei Pan;
Xiaoli Cui;
Fenjiao Zhang;
Yang He;
Lingyan Li;
Hongjiang Yang;
Lam, Joseph S.;
Van Nguyen, Scott

Publication type:

Article

Bacteriophage recombineering in the lytic state using the lambda red recombinases.

Published in:

Microbial Biotechnology, 2012, v. 5, n. 4, p. 466, doi. 10.1111/j.1751-7915.2011.00292.x

By:

Fehér, Tamás;
Karcagi, Ildikó;
Blattner, Frederick R.;
Pósfai, György

Publication type:

Article

Software-based analysis of bacteriophage genomes, physical ends, and packaging strategies.

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-3018-2

By:

Merrill, Bryan D.;
Ward, Andy T.;
Grose, Julianne H.;
Hope, Sandra

Publication type:

Article

A functional genomics screen identifies an Importin-α homolog as a regulator of stem cell function and tissue patterning during planarian regeneration.

Published in:

BMC Genomics, 2015, v. 16, p. 1, doi. 10.1186/s12864-015-1979-1

By:

Hubert, Amy;
Henderson, Jordana M.;
Cowles, Martis W.;
Ross, Kelly G.;
Hagen, Matthew;
Anderson, Christa;
Szeterlak, Claudia J.;
Zayas, Ricardo M.

Publication type:

Article

Automated classification of tailed bacteriophages according to their neck organization.

Published in:

BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-1027

By:

Lopes, Anne;
Tavares, Paulo;
Petit, Marie-Agnès;
Guérois, Raphaël;
Zinn-Justin, Sophie

Publication type:

Article

STUDY ON IMMUNE EFFICACY OF GENOMIC EXPRESSION LIBRARY VACCINES AGAINST AVIAN PASTEURELLA MULTOCIDA.

Published in:

Slovenian Veterinary Research / Slovenski Veterinarski Zbornik, 2013, v. 50, n. 1, p. 5

By:

Qiang Gong;
Ming Cheng;
Ming-fu Niu;
Qin, Gui-li

Publication type:

Article

Plasmodium falciparum Nucleosomes Exhibit Reduced Stability and Lost Sequence Dependent Nucleosome Positioning.

Published in:

PLoS Pathogens, 2016, v. 12, n. 12, p. 1, doi. 10.1371/journal.ppat.1006080

By:

Silberhorn, Elisabeth;
Schwartz, Uwe;
Löffler, Patrick;
Schmitz, Samuel;
Symelka, Anne;
de Koning-Ward, Tania;
Merkl, Rainer;
Längst, Gernot

Publication type:

Article

Genomics of <italic>Salmonella</italic> phage ΦStp1: candidate bacteriophage for biocontrol.

Published in:

Virus Genes, 2018, v. 54, n. 2, p. 311, doi. 10.1007/s11262-018-1538-3

By:

Sritha, K. S.;
Bhat, Sarita G.

Publication type:

Article

Genomic characterization of Salmonella bacteriophages isolated from India.

Published in:

Virus Genes, 2016, v. 52, n. 1, p. 117, doi. 10.1007/s11262-015-1269-7

By:

Karpe, Yogesh;
Kanade, Gayatri;
Pingale, Kunal;
Arankalle, Vidya;
Banerjee, Kalyan

Publication type:

Article

Complete genome sequence of a novel lytic bacteriophage isolated from Ralstonia solanacearum.

Published in:

Archives of Virology, 2017, v. 162, n. 12, p. 3919, doi. 10.1007/s00705-017-3555-2

By:

Su, Jingfang;
Sun, Hongwei;
Liu, Junjie;
Guo, Zhaokui;
Fan, Guoquan;
Gu, Gang;
Wang, Guanghua

Publication type:

Article

Analysis of deoxynucleosides in bacteriophages ϕEF24C and K and the frequency of a specific restriction site in the genomes of members of the bacteriophage subfamily Spounavirinae.

Published in:

2012

By:

Uchiyama, Jumpei;
Maeda, Yusuke;
Takemura, Iyo;
Gamoh, Keiji;
Matsuzaki, Shigenobu;
Daibata, Masanori

Publication type:

Report

Properties of the new D3-like Pseudomonas aeruginosa bacteriophage phiPMG1: Genome structure and prospects for the use in phage therapy.

Published in:

Russian Journal of Genetics, 2012, v. 48, n. 9, p. 902, doi. 10.1134/S1022795412060087

By:

Krylov, S.;
Kropinski, A.;
Pleteneva, E.;
Shaburova, O.;
Burkal'tseva, M.;
Mirosnnikov, K.;
Krylov, V.

Publication type:

Article

Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity.

Published in:

eLife, 2015, p. 1, doi. 10.7554/eLife.06416.001

By:

Pope, Welkin H.;
Bowman, Charles A.;
Russell, Daniel A.;
Jacobs-Sera, Deborah;
Hendrix, Roger W.;
Lawrence, Jeffrey G.;
Hatfull, Graham F.;
Asai, David J.;
Cresawn, Steven G.;
Jacobs Jr., William R.

Publication type:

Article

Phylogenetic and comparative genomics of the family Leptotrichiaceae and introduction of a novel fingerprinting MLVA for Streptobacillus moniliformis.

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-3206-0

By:

Eisenberg, Tobias;
Fawzy, Ahmad;
Nicklas, Werner;
Semmler, Torsten;
Ewers, Christa

Publication type:

Article