Works matching DE "BACTERIAL population genetics"

Results: 47

Bacterial evolution: Converging on divergence.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 6, p. 378, doi. 10.1038/nrmicro2798

By:

Kåhrström, Christina Tobin

Publication type:

Article

Identification of species and genotypic compositions of Cryptomonas (Cryptophyceae) populations in the eutrophic Lake Hira, Japan, using single-cell PCR.

Published in:

Aquatic Ecology, 2015, v. 49, n. 3, p. 263, doi. 10.1007/s10452-015-9520-9

By:

Nishino, Hiroshi;
Hodoki, Yoshikuni;
Thottathil, Shoji;
Ohbayashi, Kako;
Takao, Yoshitake;
Nakano, Shin-ichi

Publication type:

Article

Phylotype Dynamics of Bacterial P Utilization Genes in Microbialites and Bacterioplankton of a Monomictic Endorheic Lake.

Published in:

Microbial Ecology, 2017, v. 73, n. 2, p. 296, doi. 10.1007/s00248-016-0862-1

By:

Valdespino-Castillo, Patricia;
Alcántara-Hernández, Rocío;
Merino-Ibarra, Martín;
Alcocer, Javier;
Macek, Miroslav;
Moreno-Guillén, Octavio;
Falcón, Luisa

Publication type:

Article

Pyrosequencing Analysis of the Salivary Microbiota of Healthy Chinese Children and Adults.

Published in:

Microbial Ecology, 2013, v. 65, n. 2, p. 487, doi. 10.1007/s00248-012-0123-x

By:

Ling, Zongxin;
Liu, Xia;
Wang, Yuezhu;
Li, Lanjuan;
Xiang, Charlie

Publication type:

Article

PanGP: A tool for quickly analyzing bacterial pan-genome profile.

Published in:

Bioinformatics, 2014, v. 30, n. 9, p. 1297, doi. 10.1093/bioinformatics/btu017

By:

Zhao, Yongbing;
Jia, Xinmiao;
Yang, Junhui;
Ling, Yunchao;
Zhang, Zhang;
Yu, Jun;
Wu, Jiayan;
Xiao, Jingfa

Publication type:

Article

Automatic identification of mixed bacterial species fingerprints in a MALDI-TOF mass-spectrum.

Published in:

Bioinformatics, 2014, v. 30, n. 9, p. 1280, doi. 10.1093/bioinformatics/btu022

By:

Mahé, Pierre;
Arsac, Maud;
Chatellier, Sonia;
Monnin, Valérie;
Perrot, Nadine;
Mailler, Sandrine;
Girard, Victoria;
Ramjeet, Mahendrasingh;
Surre, Jérémy;
Lacroix, Bruno;
van Belkum, Alex;
Veyrieras, Jean-Baptiste

Publication type:

Article

Microbial genetics: All by myself - mutation rates in lone bacteria.

Published in:

Nature Reviews Genetics, 2014, v. 15, n. 6, p. 363, doi. 10.1038/nrg3749

By:

Lokody, Isabel

Publication type:

Article

Accumulation of lead (Pb II) metal ions by Bacillus toyonensis SCE1 species, innate to industrial-area ground water and nanoparticle synthesis.

Published in:

Applied Nanoscience, 2019, v. 9, n. 1, p. 49, doi. 10.1007/s13204-018-0892-8

By:

Mathew, Blessy Baby;
Biju, Vinai George;
Nideghatta Beeregowda, Krishnamurthy

Publication type:

Article

LIFE-HISTORY VARIATION OF Drosophila subobscura UNDER LEAD POLLUTION DEPENDS ON POPULATION HISTORY.

Published in:

Genetika (0534-0012), 2014, v. 46, n. 3, p. 693, doi. 10.2298/GENSR1403693K

By:

KENIG, Bojan;
PATENKOVIĆ, Aleksandra;
ANĐELKOVIĆ, Marko;
STAMENKOVIĆ-RADAK, Marina

Publication type:

Article

Analysis of the population genetics of clades of enterohaemorrhagic Escherichia coli O157:H7/H- isolated in three areas in Japan.

Published in:

Journal of Applied Microbiology, 2014, v. 117, n. 4, p. 1191, doi. 10.1111/jam.12604

By:

Hirai, S.;
Yokoyama, E.;
Etoh, Y.;
Seto, J.;
Ichihara, S.;
Suzuki, Y.;
Maeda, E.;
Sera, N.;
Horikawa, K.;
Yamamoto, T.

Publication type:

Article

A Specific A/T Polymorphism in Western Tyrosine Phosphorylation B-Motifs Regulates Helicobacter pylori CagA Epithelial Cell Interactions.

Published in:

PLoS Pathogens, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.ppat.1004621

By:

Zhang, Xue-Song;
Tegtmeyer, Nicole;
Traube, Leah;
Jindal, Shawn;
Perez-Perez, Guillermo;
Sticht, Heinrich;
Backert, Steffen;
Blaser, Martin J.

Publication type:

Article

The prokaryotic community of a historically mining-impacted tropical stream sediment is as diverse as that from a pristine stream sediment.

Published in:

Extremophiles, 2013, v. 17, n. 2, p. 301, doi. 10.1007/s00792-013-0517-9

By:

Reis, Mariana;
Barbosa, Francisco;
Chartone-Souza, Edmar;
Nascimento, Andréa

Publication type:

Article

Anthrax Susceptibility: Human Genetic Polymorphisms Modulating ANTXR2 Expression.

Published in:

Toxins, 2016, v. 8, n. 1, p. 1, doi. 10.3390/toxins8010001

By:

Zhang Zhang;
Yan Zhang;
Minglei Shi;
Bingyu Ye;
Wenlong Shen;
Ping Li;
Lingyue Xing;
Xiaopeng Zhang;
Lihua Hou;
Junjie Xu;
Zhihu Zhao;
Wei Chen

Publication type:

Article

Chicken Caecal Microbiome Modifications Induced by Campylobacter jejuni Colonization and by a Non-Antibiotic Feed Additive.

Published in:

PLoS ONE, 2015, v. 10, n. 7, p. 1, doi. 10.1371/journal.pone.0131978

By:

Thibodeau, Alexandre;
Fravalo, Philippe;
Yergeau, Étienne;
Arsenault, Julie;
Lahaye, Ludovic;
Letellier, Ann

Publication type:

Article

Strain Classification of Mycobacterium tuberculosis Isolates in Brazil Based on Genotypes Obtained by Spoligotyping, Mycobacterial Interspersed Repetitive Unit Typing and the Presence of Large Sequence and Single Nucleotide Polymorphism.

Published in:

PLoS ONE, 2014, v. 9, n. 10, p. 1, doi. 10.1371/journal.pone.0107747

By:

Vasconcellos, Sidra E. G.;
Acosta, Chyntia Carolina;
Gomes, Lia Lima;
Conceição, Emilyn Costa;
Lima, Karla Valéria;
de Araujo, Marcelo Ivens;
Leite, Maria de Lourdes;
Tannure, Flávio;
Caldas, Paulo Cesar de Souza;
Gomes, Harrison M.;
Santos, Adalberto Rezende;
Gomgnimbou, Michel K.;
Sola, Christophe;
Couvin, David;
Rastogi, Nalin;
Boechat, Neio;
Suffys, Philip Noel

Publication type:

Article

Etiologies and Resistance Profiles of Bacterial Community-Acquired Pneumonia in Cambodian and Neighboring Countries’ Health Care Settings: A Systematic Review (1995 to 2012).

Published in:

PLoS ONE, 2014, v. 9, n. 3, p. 1, doi. 10.1371/journal.pone.0089637

By:

Goyet, Sophie;
Vlieghe, Erika;
Kumar, Varun;
Newell, Steven;
Moore, Catrin E.;
Bousfield, Rachel;
Leang, Heng C.;
Chuop, Sokheng;
Thong, Phe;
Rammaert, Blandine;
Hem, Sopheak;
van Griensven, Johan;
Rachmat, Agus;
Fassier, Thomas;
Lim, Kruy;
Tarantola, Arnaud

Publication type:

Article

Ecological Niche Modeling of <i>Bacillus anthracis</i> on Three Continents: Evidence for Genetic-Ecological Divergence?

Published in:

PLoS ONE, 2013, v. 8, n. 8, p. 1, doi. 10.1371/journal.pone.0072451

By:

Mullins, Jocelyn C.;
Garofolo, Giuliano;
Van Ert, Matthew;
Fasanella, Antonio;
Lukhnova, Larisa;
Hugh-Jones, Martin E.;
Blackburn, Jason K.

Publication type:

Article

The Weak Shall Inherit: Bacteriocin-Mediated Interactions in Bacterial Populations

Published in:

PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0063837

By:

Majeed, Hadeel;
Lampert, Adam;
Ghazaryan, Lusine;
Gillor, Osnat

Publication type:

Article

Bacterial Population in Intestines of the Black Tiger Shrimp (<i>Penaeus monodon</i>) under Different Growth Stages.

Published in:

PLoS ONE, 2013, v. 8, n. 4, p. 1, doi. 10.1371/journal.pone.0060802

By:

Rungrassamee, Wanilada;
Klanchui, Amornpan;
Chaiyapechara, Sage;
Maibunkaew, Sawarot;
Tangphatsornruang, Sithichoke;
Jiravanichpaisal, Pikul;
Karoonuthaisiri, Nitsara

Publication type:

Article

The Variability of the 16S rRNA Gene in Bacterial Genomes and Its Consequences for Bacterial Community Analyses.

Published in:

PLoS ONE, 2013, v. 8, n. 2, p. 1, doi. 10.1371/journal.pone.0057923

By:

Větrovský, Tomáš;
Baldrian, Petr

Publication type:

Article

Designing Antibiotic Cycling Strategies by Determining and Understanding Local Adaptive Landscapes.

Published in:

PLoS ONE, 2013, v. 8, n. 2, p. 1, doi. 10.1371/journal.pone.0056040

By:

Goulart, Christiane P.;
Mahmudi, Mentar;
Crona, Kristina A.;
Jacobs, Stephen D.;
Kallmann, Marcelo;
Hall, Barry G.;
Greene, Devin C.;
Barlow, Miriam

Publication type:

Article

Artepillin C, a Major Ingredient of Brazilian Propolis, Induces a Pungent Taste by Activating TRPA1 Channels.

Published in:

PLoS ONE, 2012, v. 7, n. 11, p. 1, doi. 10.1371/journal.pone.0048072

By:

Taketoshi Hata;
Shigemi Tazawa;
Shozo Ohta;
Mee-Ra Rhyu;
Takumi Misaka;
Kenji Ichihara

Publication type:

Article

The ecological roles of bacterial populations in the surface sediments of coastal lagoon environments in Japan as revealed by quantification and qualification of 16S rDNA.

Published in:

World Journal of Microbiology & Biotechnology, 2013, v. 29, n. 5, p. 759, doi. 10.1007/s11274-012-1231-y

By:

Tsuboi, Shun;
Amemiya, Takashi;
Seto, Koji;
Itoh, Kiminori;
Rajendran, Narasimmalu

Publication type:

Article

Analysis of fluorescent reporters indicates heterogeneity in glucose uptake and utilization in clonal bacterial populations.

Published in:

BMC Microbiology, 2013, v. 13, n. 1, p. 1, doi. 10.1186/1471-2180-13-258

By:

Nikolic, Nela;
Barner, Thomas;
Ackermann, Martin

Publication type:

Article

Spatial population genetic structure of a bacterial parasite in close coevolution with its host.

Published in:

Molecular Ecology, 2018, v. 27, n. 6, p. 1371, doi. 10.1111/mec.14545

By:

Andras, Jason P.;
Fields, Peter D.;
Ebert, Dieter

Publication type:

Article

Lytic activity by temperate phages of Pseudomonas aeruginosa in long-term cystic fibrosis chronic lung infections.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2015, v. 9, n. 6, p. 1391, doi. 10.1038/ismej.2014.223

By:

James, Chloe E;
Davies, Emily V;
Fothergill, Joanne L;
Walshaw, Martin J;
Beale, Colin M;
Brockhurst, Michael A;
Winstanley, Craig

Publication type:

Article

Impact of enumeration method on diversity of Escherichia coli genotypes isolated from surface water.

Published in:

Letters in Applied Microbiology, 2016, v. 63, n. 5, p. 369, doi. 10.1111/lam.12633

By:

Martin, E.C.;
Gentry, T.J.

Publication type:

Article

Constraints on adaptation of Escherichia coli to mixed-resource environments increase over time.

Published in:

Evolution, 2015, v. 69, n. 8, p. 2067, doi. 10.1111/evo.12710

By:

Satterwhite, Rebecca S.;
Cooper, Tim F.

Publication type:

Article

Molecular evolution: Adaptation by loss of function.

Published in:

Nature Reviews Genetics, 2013, v. 14, n. 9, p. 596, doi. 10.1038/nrg3557

By:

Stower, Hannah

Publication type:

Article

Defining heterogeneity within bacterial populations via single cell approaches.

Published in:

BioEssays, 2016, v. 38, n. 8, p. 782, doi. 10.1002/bies.201500121

By:

Davis, Kimberly M.;
Isberg, Ralph R.

Publication type:

Article

Molecular evolution and population genetics of a Gram-negative binding protein gene in the malaria vector Anopheles gambiae (sensu lato).

Published in:

Parasites & Vectors, 2016, v. 9, p. 1, doi. 10.1186/s13071-016-1800-2

By:

Salgueiro, Patrícia;
Lopes, Ana Sofia;
Mendes, Cristina;
Charlwood, Jacques Derek;
Arez, Ana Paula;
Pinto, João;
Silveira, Henrique

Publication type:

Article

Genome diversification within a clonal population of pandemic Vibrio parahaemolyticus seems to depend on the life circumstances of each individual bacteria.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1385-8

By:

Loyola, David E.;
Navarro, Cristell;
Uribe, Paulina;
García, Katherine;
Mella, Claudia;
Díaz, Diego;
Valdes, Natalia;
Martínez-Urtaza, Jaime;
Espejo, Romilio T.

Publication type:

Article

A gene-by-gene population genomics platform: de novo assembly, annotation and genealogical analysis of 108 representative Neisseria meningitidis genomes.

Published in:

BMC Genomics, 2014, v. 15, n. 1, p. 348, doi. 10.1186/1471-2164-15-1138

By:

Bratcher, Holly B.;
Corton, Craig;
Jolley, Keith A.;
Parkhill, Julian;
Maiden, Martin C. J.

Publication type:

Article

Optimal Census by Quorum Sensing.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 5, p. 1, doi. 10.1371/journal.pcbi.1004238

By:

Taillefumier, Thibaud;
Wingreen, Ned S.

Publication type:

Article

Defining the Estimated Core Genome of Bacterial Populations Using a Bayesian Decision Model.

Published in:

2014

By:

van Tonder, Andries J.;
Mistry, Shilan;
Bray, James E.;
Hill, Dorothea M. C.;
Cody, Alison J.;
Farmer, Chris L.;
Klugman, Keith P.;
von Gottberg, Anne;
Bentley, Stephen D.;
Parkhill, Julian;
Jolley, Keith A.;
Maiden, Martin C. J.;
Brueggemann, Angela B.

Publication type:

Case Study

Origins and global context of Brucella abortus in Italy.

Published in:

BMC Microbiology, 2017, v. 17, p. 1, doi. 10.1186/s12866-017-0939-0

By:

Garofolo, Giuliano;
Di Giannatale, Elisabetta;
Platone, Ilenia;
Zilli, Katiuscia;
Sacchini, Lorena;
Abass, Anna;
Ancora, Massimo;
Cammà, Cesare;
Di Donato, Guido;
De Massis, Fabrizio;
Calistri, Paolo;
Drees, Kevin P.;
Foster, Jeffrey T.

Publication type:

Article

Population genetic structure and demographic history of Streptococcus mutans (Bacteria: Streptococcaceae).

Published in:

Biological Journal of the Linnean Society, 2017, v. 120, n. 3, p. 705

By:

GONZÁLEZ-ITTIG, RAÚL E.;
CARLETTO-KÖRBER, FABIANA P. M.;
VERA, NOELIA S.;
JIMÉNEZ, MARÍA G.;
CORNEJO, LILA S.

Publication type:

Article

Next-generation sequencing propels environmental genomics to the front line of research.

Published in:

Heredity, 2015, v. 114, n. 5, p. 429, doi. 10.1038/hdy.2015.23

By:

Joly, D;
Faure, D

Publication type:

Article

Impact of Phanerochaete chrysosporium on the Functional Diversity of Bacterial Communities Associated with Decaying Wood.

Published in:

PLoS ONE, 2016, v. 11, n. 1, p. 1, doi. 10.1371/journal.pone.0147100

By:

Hervé, Vincent;
Ketter, Elodie;
Pierrat, Jean-Claude;
Gelhaye, Eric;
Frey-Klett, Pascale

Publication type:

Article

Molecular characterization of midgut microbiota of Aedes albopictus and Aedes aegypti from Arunachal Pradesh, India.

Published in:

Parasites & Vectors, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s13071-015-1252-0

By:

Yadav, Kamlesh K.;
Bora, Ajitabh;
Datta, Sibnarayan;
Chandel, Kshitij;
Gogoi, Hemant K.;
Prasad, G. B. K. S.;
Veer, Vijay

Publication type:

Article

Population Diversity of ORFan Genes in Escherichia coli.

Published in:

Genome Biology & Evolution, 2012, v. 4, n. 11, p. 1176, doi. 10.1093/gbe/evs081

By:

Yu, Guoqin;
Stoltzfus, Arlin

Publication type:

Article

Liming in the sugarcane burnt system and the green harvest practice affect soil bacterial community in northeastern São Paulo, Brazil.

Published in:

Antonie van Leeuwenhoek, 2016, v. 109, n. 12, p. 1643, doi. 10.1007/s10482-016-0764-8

By:

Val-Moraes, Silvana;
Macedo, Helena;
Kishi, Luciano;
Pereira, Rodrigo;
Navarrete, Acacio;
Mendes, Lucas;
Figueiredo, Eduardo;
Scala, Newton;
Tsai, Siu;
Macedo Lemos, Eliana;
Alves, Lúcia

Publication type:

Article

Bacmeta: simulator for genomic evolution in bacterial metapopulations.

Published in:

Bioinformatics, 2018, v. 34, n. 13, p. 2308, doi. 10.1093/bioinformatics/bty093

By:

Sipola, Aleksi;
Marttinen, Pekka;
Corander, Jukka

Publication type:

Article

Segregational Drift Constrains the Evolutionary Rate of Prokaryotic Plasmids.

Published in:

Molecular Biology & Evolution, 2021, v. 38, n. 12, p. 5610, doi. 10.1093/molbev/msab283

By:

Garoña, Ana;
Hülter, Nils F;
Picazo, Devani Romero;
Dagan, Tal

Publication type:

Article

Acute dextran sulfate sodium (DSS)-induced colitis promotes gut microbial dysbiosis in mice.

Published in:

Journal of Basic Microbiology, 2016, v. 56, n. 9, p. 986, doi. 10.1002/jobm.201500726

By:

Munyaka, Peris Mumbi;
Rabbi, Mohammad Fazle;
Khafipour, Ehsan;
Ghia, Jean‐Eric

Publication type:

Article

Effect of sludge age on microbial consortia developed in MFCs.

Published in:

Journal of Chemical Technology & Biotechnology, 2018, v. 93, n. 5, p. 1290, doi. 10.1002/jctb.5488

By:

Mateo, Sara;
Zamorano‐López, Nuria;
Borras, Luis;
Fernandez‐Morales, Francisco Jesús;
Cañizares, Pablo;
Seco, Aurora;
Rodrigo, Manuel

Publication type:

Article

Genomic insights from whole genome sequencing of four clonal outbreak Campylobacter jejuni assessed within the global C. jejuni population.

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-3340-8

By:

Clark, Clifford G.;
Berry, Chrystal;
Walker, Matthew;
Petkau, Aaron;
Barker, Dillon O. R.;
Cai Guan;
Reimer, Aleisha;
Taboada, Eduardo N.

Publication type:

Article