Works matching DE "BACTERIAL operons"

Results: 145

Horizontal Transfer of Bacterial Operons into Eukaryote Genomes.

Published in:

Genome Biology & Evolution, 2025, v. 17, n. 4, p. 1, doi. 10.1093/gbe/evaf055

By:

Kogay, Roman;
Wolf, Yuri I;
Koonin, Eugene V

Publication type:

Article

Construction of a tightly-controlled expression system for use in Pseudomonas.

Published in:

Biotechnology Letters, 2013, v. 35, n. 11, p. 1901, doi. 10.1007/s10529-013-1280-9

By:

Yang, Liang;
Chen, Lin;
Shen, Lixin;
Duan, Kangmin

Publication type:

Article

Non-contiguous finished genome sequence of Phocaeicola abscessus type strain 7401987.

Published in:

Standards in Genomic Sciences, 2013, v. 9, n. 2, p. 351, doi. 10.4056/sigs.4428244

By:

Roux, Véronique;
Robert, Catherine;
Raoult, Didier

Publication type:

Article

Non-contiguous finished genome sequence and description of Oceanobacillus massiliensis sp. nov.

Published in:

Standards in Genomic Sciences, 2013, v. 9, n. 2, p. 370, doi. 10.4056/sigs.4267953

By:

Roux, Véronique;
Million, Matthieu;
Robert, Catherine;
Magne, Alix;
Raoult, Didier

Publication type:

Article

Predicting Selective RNA Processing and Stabilization Operons in Clostridium spp.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.673349

By:

Bhaskar, Yogendra;
Su, Xiaoquan;
Xu, Chenggang;
Xu, Jian

Publication type:

Article

The yrpAB operon of Yersinia ruckeri encoding two putative U32 peptidases is involved in virulence and induced under microaerobic conditions.

Published in:

Virulence, 2014, v. 5, n. 5, p. 619, doi. 10.4161/viru.29363

By:

Navais, Roberto;
Méndez, Jessica;
Pérez-Pascual, David;
Cascales, Desirée;
Guijarro, José A

Publication type:

Article

Extensive reshaping of bacterial operons by programmed mRNA decay.

Published in:

PLoS Genetics, 2018, v. 14, n. 4, p. 1, doi. 10.1371/journal.pgen.1007354

By:

Dar, Daniel;
Sorek, Rotem

Publication type:

Article

Characterization and genetic analyses of a carbazole-degrading gram-positive marine isolate, Janibacter sp. strain OC11.

Published in:

Bioscience, Biotechnology & Biochemistry, 2014, v. 78, n. 6, p. 1094, doi. 10.1080/09168451.2014.917260

By:

Shintaro Oba;
Toshihiro Suzuki;
Rintaro Maeda;
Toshio Omori;
Hiroyuki Fuse

Publication type:

Article

Phylogenetic relationship of Paenibacillus species based on putative replication origin regions and analysis of an yheCD-like sequence found in this region.

Published in:

Bioscience, Biotechnology & Biochemistry, 2014, v. 78, n. 5, p. 891, doi. 10.1080/09168451.2014.905188

By:

Iiyama, Kazuhiro;
Otao, Masahiro;
Mori, Kazuki;
Mon, Hiroaki;
Lee, Jae Man;
Kusakabe, Takahiro;
Tashiro, Kousuke;
Asano, Shin-Ichiro;
Yasunaga-Aoki, Chisa

Publication type:

Article

Heterologous Expression and Functional Characterization of a Novel Chitinase from the Chitinolytic Bacterium Chitiniphilus shinanonensis.

Published in:

Bioscience, Biotechnology & Biochemistry, 2012, v. 76, n. 3, p. 517, doi. 10.1271/bbb.110822

By:

Huang, Lanxiang;
Shizume, Arisa;
Nogawa, Masahiro;
Taguchi, Goro;
Shimosaka, Makoto

Publication type:

Article

Exchange and Complementation of Genes Coding for Photosynthetic Reaction Center Core Subunits among Purple Bacteria.

Published in:

Journal of Molecular Evolution, 2014, v. 79, n. 1/2, p. 52, doi. 10.1007/s00239-014-9634-z

By:

Nagashima, Kenji;
Verméglio, André;
Fusada, Naoki;
Nagashima, Sakiko;
Shimada, Keizo;
Inoue, Kazuhito

Publication type:

Article

Evolutionary Analysis and Lateral Gene Transfer of Two-Component Regulatory Systems Associated with Heavy-Metal Tolerance in Bacteria.

Published in:

Journal of Molecular Evolution, 2013, v. 76, n. 5, p. 267, doi. 10.1007/s00239-013-9558-z

By:

Bouzat, Juan;
Hoostal, Matthew

Publication type:

Article

Multifaceted Stoichiometry Control of Bacterial Operons Revealed by Deep Proteome Quantification.

Published in:

Frontiers in Genetics, 2019, p. 1, doi. 10.3389/fgene.2019.00473

By:

Zhao, Jing;
Zhang, Hong;
Qin, Bo;
Nikolay, Rainer;
He, Qing-Yu;
Spahn, Christian M. T.;
Zhang, Gong

Publication type:

Article

Engaging students into their own learning of foundational genetics concepts through the 5E learning cycle and interleaving teaching techniques.

Published in:

Journal of Biological Education (Taylor & Francis Ltd), 2020, v. 54, n. 5, p. 514, doi. 10.1080/00219266.2019.1620311

By:

Ylostalo, Joni H.

Publication type:

Article

Seven new species of Oculatella (Pseudanabaenales, Cyanobacteria): taxonomically recognizing cryptic diversification.

Published in:

European Journal of Phycology, 2014, v. 49, n. 4, p. 450, doi. 10.1080/09670262.2014.976843

By:

Osorio-Santos, Karina;
Pietrasiak, Nicole;
Bohunická, Markéta;
Miscoe, Laura H.;
Kováčik, Lubomir;
Martin, Michael P.;
Johansen, Jeffrey R.

Publication type:

Article

Dual 3'Seq using deepSuperSAGE uncovers transcriptomes of interacting Salmonella enterica Typhimurium and human host cells.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1489-1

By:

Afonso-Grunz, Fabian;
Hoffmeier, Klaus;
Müller, Sören;
Westermann, Alexander J.;
Rotter, Björn;
Vogel, Jörg;
Winter, Peter;
Kahl, Günter

Publication type:

Article

Spatial features for Escherichia coli genome organization.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1258-1

By:

Ting Xie;
Liang-Yu Fu;
Qing-Yong Yang;
Heng Xiong;
Hongrui Xu;
Bin-Guang Ma;
Hong-Yu Zhang

Publication type:

Article

Transcriptome analysis of thermophilic methylotrophic Bacillus methanolicus MGA3 using RNA-sequencing provides detailed insights into its previously uncharted transcriptional landscape.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1239-4

By:

Irla, Marta;
Neshat, Armin;
Brautaset, Trygve;
Rückert, Christian;
Kalinowski, Jörn;
Wendisch, Volker F.

Publication type:

Article

Interplay of Gene Expression Noise and Ultrasensitive Dynamics Affects Bacterial Operon Organization.

Published in:

PLoS Computational Biology, 2012, v. 8, n. 8, p. 1, doi. 10.1371/journal.pcbi.1002672

By:

Ray, J. Christian J.;
Igoshin, Oleg A.

Publication type:

Article

Cloning and identification of Group 1 mrp operon encoding a novel monovalent cation/proton antiporter system from the moderate halophile Halomonas zhaodongensis.

Published in:

Extremophiles, 2014, v. 18, n. 6, p. 963, doi. 10.1007/s00792-014-0666-5

By:

Meng, Lin;
Hong, Shan;
Liu, Henan;
Huang, Haipeng;
Sun, Hao;
Xu, Tong;
Jiang, Juquan

Publication type:

Article

Mutations improving production and secretion of extracellular lipase by Burkholderia glumae PG1.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 3, p. 1265, doi. 10.1007/s00253-015-7041-z

By:

Knapp, Andreas;
Voget, Sonja;
Gao, Rong;
Zaburannyi, Nestor;
Krysciak, Dagmar;
Breuer, Michael;
Hauer, Bernhard;
Streit, Wolfgang;
Müller, Rolf;
Daniel, Rolf;
Jaeger, Karl-Erich

Publication type:

Article

Constructing a synthetic constitutive metabolic pathway in Escherichia coli for ( R, R)-2,3-butanediol production.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 2, p. 637, doi. 10.1007/s00253-015-7013-3

By:

Tong, Ying-Jia;
Ji, Xiao-Jun;
Shen, Meng-Qiu;
Liu, Lu-Gang;
Nie, Zhi-Kui;
Huang, He

Publication type:

Article

Synthetic operon for (R,R)-2,3-butanediol production in Bacillus subtilis and Escherichia coli.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 2, p. 719, doi. 10.1007/s00253-015-7030-2

By:

Oliveira, Rafael;
Nicholson, Wayne

Publication type:

Article

Bacilysin overproduction in Bacillus amyloliquefaciens FZB42 markerless derivative strains FZBREP and FZBSPA enhances antibacterial activity.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 10, p. 4255, doi. 10.1007/s00253-014-6251-0

By:

Wu, Liming;
Wu, Huijun;
Chen, Lina;
Lin, Ling;
Borriss, Rainer;
Gao, Xuewen

Publication type:

Article

Improvement of lichenysin production in Bacillus licheniformis by replacement of native promoter of lichenysin biosynthesis operon and medium optimization.

Published in:

Applied Microbiology & Biotechnology, 2014, v. 98, n. 21, p. 8895, doi. 10.1007/s00253-014-5978-y

By:

Qiu, Yimin;
Xiao, Fang;
Wei, Xuetuan;
Wen, Zhiyou;
Chen, Shouwen

Publication type:

Article

Influence of the operon structure on poly(3-hydroxypropionate) synthesis in Shimwellia blattae.

Published in:

Applied Microbiology & Biotechnology, 2014, v. 98, n. 17, p. 7409, doi. 10.1007/s00253-014-5804-6

By:

Andreeßen, Björn;
Johanningmeier, Benjamin;
Burbank, Joachim;
Steinbüchel, Alexander

Publication type:

Article

Construction of an engineered strain capable of degrading two isomeric nitrophenols via a sacB- and gfp-based markerless integration system.

Published in:

Applied Microbiology & Biotechnology, 2014, v. 98, n. 10, p. 4749, doi. 10.1007/s00253-014-5567-0

By:

Hu, Fan;
Jiang, Xuan;
Zhang, Jun-Jie;
Zhou, Ning-Yi

Publication type:

Article

Optimal Performance of the Tryptophan Operon of E. coli: A stochastic, Dynamical, Mathematical-Modeling Approach.

Published in:

Bulletin of Mathematical Biology, 2014, v. 76, n. 2, p. 314, doi. 10.1007/s11538-013-9920-8

By:

Salazar-Cavazos, Emanuel;
Santillán, Moisés

Publication type:

Article

OperomeDB: A Database of Condition-Specific Transcription Units in Prokaryotic Genomes.

Published in:

BioMed Research International, 2015, v. 2015, p. 1, doi. 10.1155/2015/318217

By:

Chetal, Kashish;
Janga, Sarath Chandra

Publication type:

Article

RESCUE: a validated Nanopore pipeline to classify bacteria through long-read, 16S-ITS-23S rRNA sequencing.

Published in:

Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1201064

By:

Petrone, Joseph R.;
Glusberger, Paula Rios;
George, Christian D.;
Milletich, Patricia L.;
Ahrens, Angelica P.;
Roesch, Luiz Fernando Wurdig;
Triplett, Eric W.

Publication type:

Article

RfaH contributes to maximal colonization and full virulence of hypervirulent Klebsiella pneumoniae.

Published in:

Frontiers in Cellular & Infection Microbiology, 2024, p. 1, doi. 10.3389/fcimb.2024.1454373

By:

Yichuan Qiu;
Li Xiang;
Ming Yin;
Chengju Fang;
Xiaoyi Dai;
Luhua Zhang;
Ying Li

Publication type:

Article

RfaH contributes to maximal colonization and full virulence of hypervirulent Klebsiella pneumoniae.

Published in:

Frontiers in Cellular & Infection Microbiology, 2024, p. 01, doi. 10.3389/fcimb.2024.1454373

By:

Yichuan Qiu;
Li Xiang;
Ming Yin;
Chengju Fang;
Xiaoyi Dai;
Luhua Zhang;
Ying Li

Publication type:

Article

Conserved Units of Co-Expression in Bacterial Genomes: An Evolutionary Insight into Transcriptional Regulation.

Published in:

PLoS ONE, 2016, v. 11, n. 5, p. 1, doi. 10.1371/journal.pone.0155740

By:

Junier, Ivan;
Rivoire, Olivier

Publication type:

Article

Potential for phosphite and phosphonate utilization by Prochlorococcus.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 4, p. 827, doi. 10.1038/ismej.2011.149

By:

Feingersch, Roi;
Philosof, Alon;
Mejuch, Tom;
Glaser, Fabian;
Alalouf, Onit;
Shoham, Yuval;
Béjà, Oded

Publication type:

Article

The malS-5′UTR regulates hisG, a key gene in the histidine biosynthetic pathway in Salmonella enterica serovar Typhi.

Published in:

Canadian Journal of Microbiology, 2017, v. 63, n. 4, p. 287, doi. 10.1139/cjm-2016-0490

By:

Zhang, Ying;
Yan, Dongmei;
Xia, Lin;
Zhao, Xin;
Osei-Adjei, George;
Xu, Shungao;
Sheng, Xiumei;
Huang, Xinxiang

Publication type:

Article

Identification and functional analysis of the L-ascorbate-specific enzyme II complex of the phosphotransferase system in Streptococcus mutans.

Published in:

BMC Microbiology, 2016, v. 16, p. 1, doi. 10.1186/s12866-016-0668-9

By:

Xinyu Wu;
Jin Hou;
Xiaodan Chen;
Xuan Chen;
Wanghong Zhao

Publication type:

Article

Identification and characterization of an operon, msaABCR, that controls virulence and biofilm development in Staphylococcus aureus.

Published in:

BMC Microbiology, 2014, v. 14, n. 1, p. 1, doi. 10.1186/1471-2180-14-154

By:

Sahukhal, Gyan S.;
Elasri, Mohamed O.

Publication type:

Article

Phylogenetic analysis of erythritol catabolic loci within the Rhizobiales and Proteobacteria.

Published in:

BMC Microbiology, 2013, v. 13, n. 1, p. 1, doi. 10.1186/1471-2180-13-46

By:

Geddes, Barney A.;
Hausner, Georg;
Oresnik, Ivan J.

Publication type:

Article

Transcriptional cross-activation between toxin-antitoxin systems of Escherichia coli.

Published in:

BMC Microbiology, 2013, v. 13, n. 1, p. 1, doi. 10.1186/1471-2180-13-45

By:

Kasari, Villu;
Mets, Toomas;
Tenson, Tanel;
Kaldalu, Niilo

Publication type:

Article

The <italic>Xylella fastidosa</italic> RTX operons: evidence for the evolution of protein mosaics through novel genetic exchanges.

Published in:

BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-4731-9

By:

Gambetta, Gregory A.;
Matthews, Mark A.;
Syvanen, Michael

Publication type:

Article

Discovery and characterization of a Gram-positive Pel polysaccharide biosynthetic gene cluster.

Published in:

PLoS Pathogens, 2020, v. 16, n. 4, p. 1, doi. 10.1371/journal.ppat.1008281

By:

Whitfield, Gregory B.;
Marmont, Lindsey S.;
Bundalovic-Torma, Cedoljub;
Razvi, Erum;
Roach, Elyse J.;
Khursigara, Cezar M.;
Parkinson, John;
Howell, P. Lynne

Publication type:

Article

Assembly of a complete genome sequence for Gemmata obscuriglobus reveals a novel prokaryotic rRNA operon gene architecture.

Published in:

Antonie van Leeuwenhoek, 2018, v. 111, n. 11, p. 2095, doi. 10.1007/s10482-018-1102-0

By:

Franke, Josef D.;
Blomberg, Wilson R.;
Todd, Robert T.;
Thomas, Robert W.;
Selmecki, Anna M.

Publication type:

Article

The structure of Vibrio cholerae FeoC reveals conservation of the helix-turn-helix motif but not the cluster-binding domain.

Published in:

Journal of Biological Inorganic Chemistry (JBIC), 2022, v. 27, n. 4/5, p. 485, doi. 10.1007/s00775-022-01945-4

By:

Brown, Janae B.;
Lee, Mark A.;
Smith, Aaron T.

Publication type:

Article

Bistability and Asynchrony in a Boolean Model of the l-arabinose Operon in Escherichia coli.

Published in:

Bulletin of Mathematical Biology, 2017, v. 79, n. 8, p. 1778, doi. 10.1007/s11538-017-0306-1

By:

Jenkins, Andy;
Macauley, Matthew

Publication type:

Article

Phenotype microarray analysis of the AdeRS two-component system in Acinetobacter baumannii.

Published in:

European Journal of Clinical Microbiology & Infectious Diseases, 2017, v. 36, n. 12, p. 2343, doi. 10.1007/s10096-017-3066-9

By:

Sun, J.-R.;
Chiang, Y.-S.;
Shang, H.-S.;
Perng, C.-L.;
Yang, Y.-S.;
Chiueh, T.-S.

Publication type:

Article

Ellis Englesberg and the Discovery of Positive Control in Gene Regulation.

Published in:

2014

By:

Hahn, Steven

Publication type:

Opinion

Regulation of Inducible Potassium Transporter KdpFABC by the KdpD/KdpE Two-Component System in Mycobacterium smegmatis.

Published in:

Frontiers in Microbiology, 2017, v. 8, p. 1, doi. 10.3389/fmicb.2017.00570

By:

Maria K. Ali;
Xinfeng Li;
Qing Tang;
Xiaoyu Liu;
Fang Chen;
Jinfeng Xiao;
Ali, Muhammad;
Shan-Ho Chou;
Jin He

Publication type:

Article

Common Distribution of gad Operon in Lactobacillus brevis and its GadA Contributes to Efficient GABA Synthesis toward Cytosolic Near-Neutral pH.

Published in:

Frontiers in Microbiology, 2017, v. 8, p. 1, doi. 10.3389/fmicb.2017.00206

By:

Qinglong Wu;
Hein Min Tun;
Yee-Song Law;
Khafipour, Ehsan;
Shah, Nagendra P.

Publication type:

Article

The Streptococcus pneumoniae pezAT Toxin-Antitoxin System Reduces β-Lactam Resistance and Genetic Competence.

Published in:

Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.01322

By:

Chan, Wai T.;
Espinosa, Manuel;
Allan, Elaine;
Cytryn, Eddie

Publication type:

Article

Fis R activates σ<sup>54</sup>-dependent transcription of sulfide-oxidizing genes in C upriavidus pinatubonensis JMP134.

Published in:

Molecular Microbiology, 2017, v. 105, n. 3, p. 373, doi. 10.1111/mmi.13725

By:

Li, Huanjie;
Li, Juan;
Lü, Chuanjuan;
Xia, Yongzhen;
Xin, Yufeng;
Liu, Honglei;
Xun, Luying;
Liu, Huaiwei

Publication type:

Article