Works matching DE "BACTERIAL genetics"

Results: 3787

Stop and Go.

Published in:

Sciences, 2001, v. 41, n. 1, p. 7

By:

Piazza, Flavia

Publication type:

Article

Bacteriophages: an overview of the control strategies against multiple bacterial infections in different fields.

Published in:

Journal of Basic Microbiology, 2019, v. 59, n. 2, p. 123, doi. 10.1002/jobm.201800412

By:

Jamal, Muhsin;
Bukhari, Sayed M. A. U. S.;
Andleeb, Saadia;
Ali, Muhammad;
Raza, Sana;
Nawaz, Muhammad A.;
Hussain, Tahir;
Rahman, Sadeeq u.;
Shah, Syed S. A.

Publication type:

Article

Characterization of thermo-solvent stable protease from Halobacillus sp. CJ4 isolated from Chott Eldjerid hypersaline lake in Tunisia.

Published in:

Journal of Basic Microbiology, 2017, v. 57, n. 2, p. 104, doi. 10.1002/jobm.201600391

By:

Daoud, Lobna;
Jlidi, Mouna;
Hmani, Houda;
Hadj Brahim, Adel;
El Arbi, Mahdi;
Ben Ali, Mamdouh

Publication type:

Article

Physicochemical and biological characteristics of the nanostructured polysaccharide-iron hydrogel produced by microorganism Klebsiella oxytoca.

Published in:

Journal of Basic Microbiology, 2017, v. 57, n. 2, p. 132, doi. 10.1002/jobm.201600417

By:

Kianpour, Sedigheh;
Ebrahiminezhad, Alireza;
Mohkam, Milad;
Tamaddon, Ali Mohammad;
Dehshahri, Ali;
Heidari, Reza;
Ghasemi, Younes

Publication type:

Article

Characterization of endoglucanase from Paenibacillus sp. M33, a novel isolate from a freshwater swamp forest.

Published in:

Journal of Basic Microbiology, 2017, v. 57, n. 2, p. 121, doi. 10.1002/jobm.201600225

By:

Kanchanadumkerng, Pimpikar;
Sakka, Makiko;
Sakka, Kazuo;
Wiwat, Chanpen

Publication type:

Article

Genomic identification of nitrogen-fixing Klebsiella variicola, K. pneumoniae and K. quasipneumoniae.

Published in:

Journal of Basic Microbiology, 2016, v. 56, n. 1, p. 78, doi. 10.1002/jobm.201500415

By:

Chen, Mingyue;
Li, Yuanyuan;
Li, Shuying;
Tang, Lie;
Zheng, Jingwu;
An, Qianli

Publication type:

Article

Thermus anatoliensis sp. nov., a thermophilic bacterium from geothermal waters of Buharkent, Turkey.

Published in:

Journal of Basic Microbiology, 2015, v. 55, n. 12, p. 1367, doi. 10.1002/jobm.201500282

By:

Kacagan, Murat;
Inan, Kadriye;
Canakci, Sabriye;
Guler, Halil Ibrahim;
Belduz, Ali Osman

Publication type:

Article

Characterization of the native form and the carboxy-terminally truncated halotolerant form of α-amylases from Bacillus subtilis strain FP-133.

Published in:

Journal of Basic Microbiology, 2015, v. 55, n. 6, p. 780, doi. 10.1002/jobm.201400813

By:

Takenaka, Shinji;
Miyatake, Ayaka;
Tanaka, Kosei;
Kuntiya, Ampin;
Techapun, Charin;
Leksawasdi, Noppol;
Seesuriyachan, Phisit;
Chaiyaso, Thanongsak;
Watanabe, Masanori;
Yoshida, Ken‐ichi

Publication type:

Article

Pigments accumulation via light and oxygen in Rhodobacter capsulatus strain XJ-1 isolated from saline soil.

Published in:

Journal of Basic Microbiology, 2014, v. 54, n. 8, p. 828, doi. 10.1002/jobm.201200565

By:

Lin, Zhihua;
Cui, Xiaohua;
Zhao, Chungui;
Yang, Suping;
Imhoff, Johannes F.

Publication type:

Article

Development of genus-specific primers for better understanding the diversity and population structure of Sphingomonas in soils.

Published in:

Journal of Basic Microbiology, 2014, v. 54, n. 8, p. 880, doi. 10.1002/jobm.201200679

By:

Zhou, Lisha;
Li, Hui;
Zhang, Ying;
Han, Siqin;
Xu, Hui

Publication type:

Article

Differential gene expression in Acidithiobacillus ferrooxidans LR planktonic and attached cells in the presence of chalcopyrite.

Published in:

Journal of Basic Microbiology, 2014, v. 54, p. 650, doi. 10.1002/jobm.201300871

By:

Ossa Henao, Diana Marcela;
Vicentini, Renato;
Rodrigues, Viviane Drumond;
Bevilaqua, Denise;
Ottoboni, Laura Maria Mariscal

Publication type:

Article

A phylogenetic comparison of urease-positive thermophilic Campylobacter (UPTC) and urease-negative (UN) C. lari.

Published in:

Journal of Basic Microbiology, 2011, v. 51, n. 3, p. 269, doi. 10.1002/jobm.201000367

By:

Hirayama, Junichi;
Tazumi, Akihiro;
Hayashi, Kyohei;
Tasaki, Erina;
Kuribayashi, Takashi;
Moore, John E.;
Millar, Beverley C.;
Matsuda, Motoo

Publication type:

Article

Expression of hcp in freshwater Synechococcus spp., a gene encoding a hyperconserved protein in picocyanobacteria.

Published in:

Journal of Basic Microbiology, 2010, v. 50, n. 3, p. 227, doi. 10.1002/jobm.200900337

By:

Kutovaya, Olga A.;
Michael, R.;
Mckay, L.;
Bullerjahn, George S.

Publication type:

Article

Wild boars as reservoirs of extended-spectrum beta-lactamase (ESBL) producing Escherichia coil of different phylogenetic groups.

Published in:

Journal of Basic Microbiology, 2009, v. 49, n. 6, p. 584, doi. 10.1002/jobm.200900066

By:

Poeta, Patrícia;
Radhouani, Hajer;
Pinto, Luis;
Martinho, Antonio;
Rego, Vitor;
Rodrigues, Rogerio;
GonçaIves, Alexandre;
Rodrigues, Jorge;
Estepa, Vanesa;
Torres, Carmen;
Igrejas, Gilberto

Publication type:

Article

Improving the reproducibility of Pseudomonas aeruginosa swarming motility assays.

Published in:

Journal of Basic Microbiology, 2008, v. 48, n. 6, p. 509, doi. 10.1002/jobm.200800030

By:

Tremblay, Julien;
Déziel, Eric

Publication type:

Article

Agrobacterium tumefaciens-mediated transformation of the zygomycete fungus Backusella lamprospora.

Published in:

Journal of Basic Microbiology, 2008, v. 48, n. 1, p. 59, doi. 10.1002/jobm.200700221

By:

Nyilasi, Ildikó;
Papp, Tamás;
Csernetics, Árpád;
Vágvolgyi, Csaba

Publication type:

Article

The solution structure of the protein ydhA from Escherichia coli.

Published in:

Journal of Biomolecular NMR, 2006, v. 35, n. 4, p. 295, doi. 10.1007/s10858-006-9032-y

By:

Revington, Matthew;
Semesi, Anthony;
Yee, Adelinda;
Arrowsmith, Cheryl;
Shaw, Gary S.

Publication type:

Article

Pyramiding of modified cry1Ab and cry1Ac genes of Bacillus thuringiensis in transgenic chickpea ( Cicer arietinum L.) for improved resistance to pod borer insect Helicoverpa armigera.

Published in:

Euphytica, 2011, v. 182, n. 1, p. 87, doi. 10.1007/s10681-011-0501-3

By:

Mehrotra, Meenakshi;
Singh, Aditya;
Sanyal, Indraneel;
Altosaar, Illimar;
Amla, D.

Publication type:

Article

Molecular Characterization and Phylogenetic Analysis of Pseudomonas aeruginosa Isolates Recovered from Greek Aquatic Habitats Implementing the Double-Locus Sequence Typing Scheme.

Published in:

Microbial Ecology, 2017, v. 74, n. 1, p. 78, doi. 10.1007/s00248-016-0920-8

By:

Pappa, Olga;
Beloukas, Apostolos;
Vantarakis, Apostolos;
Mavridou, Athena;
Kefala, Anastasia-Maria;
Galanis, Alex

Publication type:

Article

Draft Genome of Scalindua rubra, Obtained from the Interface Above the Discovery Deep Brine in the Red Sea, Sheds Light on Potential Salt Adaptation Strategies in Anammox Bacteria.

Published in:

Microbial Ecology, 2017, v. 74, n. 1, p. 1, doi. 10.1007/s00248-017-0929-7

By:

Speth, Daan;
Lagkouvardos, Ilias;
Wang, Yong;
Qian, Pei-Yuan;
Dutilh, Bas;
Jetten, Mike

Publication type:

Article

Pond Sediment Magnetite Grains Show a Distinctive Microbial Community.

Published in:

Microbial Ecology, 2015, v. 70, n. 1, p. 168, doi. 10.1007/s00248-014-0562-7

By:

Song, H.-K.;
Sonkaria, S.;
Khare, V.;
Dong, K.;
Lee, H.-T.;
Ahn, S.-H.;
Kim, H.-K.;
Kang, H.-J.;
Lee, S.-H.;
Jung, S.;
Adams, J.

Publication type:

Article

Diversity, Abundance, and Distribution of nirS-Harboring Denitrifiers in Intertidal Sediments of the Yangtze Estuary.

Published in:

Microbial Ecology, 2015, v. 70, n. 1, p. 30, doi. 10.1007/s00248-015-0567-x

By:

Zheng, Yanling;
Hou, Lijun;
Liu, Min;
Gao, Juan;
Yin, Guoyu;
Li, Xiaofei;
Deng, Fengyu;
Lin, Xianbiao;
Jiang, Xiaofen;
Chen, Fei;
Zong, Haibo;
Zhou, Junliang

Publication type:

Article

Response of Induced Perturbation on Replicating β-Proteobacterial Ammonia-Oxidizing Populations in Soil.

Published in:

Microbial Ecology, 2012, v. 63, n. 3, p. 701, doi. 10.1007/s00248-011-9970-0

By:

Nyberg, Karin;
Enwall, Karin;
Schnürer, Anna;
Sundh, Ingvar;
Hallin, Sara

Publication type:

Article

Genotypic Characterization of Phage-Typed Indigenous Soybean Bradyrhizobia and Their Host Range Symbiotic Effectiveness.

Published in:

Microbial Ecology, 2012, v. 63, n. 1, p. 116, doi. 10.1007/s00248-011-9950-4

By:

Jaiswal, Sanjay;
Anand, Akhil;
Dhar, Banshi;
Vaishampayan, Akhouri

Publication type:

Article

Archaeal amoA Genes Outnumber Bacterial amoA Genes in Municipal Wastewater Treatment Plants in Bangkok.

Published in:

Microbial Ecology, 2011, v. 62, n. 4, p. 776, doi. 10.1007/s00248-011-9893-9

By:

Kayee, Pantip;
Sonthiphand, Puntipar;
Rongsayamanont, Chaiwat;
Limpiyakorn, Tawan

Publication type:

Article

Human Intestinal Microbiota Gene Risk Factors for Antibiotic-Associated Diarrhea: Perspectives for Prevention.

Published in:

Microbial Ecology, 2010, v. 59, n. 4, p. 830, doi. 10.1007/s00248-010-9637-2

By:

De La Cochetière, Marie-France;
Montassier, Emmanuel;
Hardouin, Jean-Benoit;
Carton, Thomas;
Le Vacon, Françoise;
Durand, Tony;
Lalande, Valerie;
Petit, Jean Claude;
Potel, Gilles;
Beaugerie, Laurent

Publication type:

Article

Cultivation-Based Assessment of Lysogeny Among Soil Bacteria.

Published in:

Microbial Ecology, 2008, v. 56, n. 3, p. 437, doi. 10.1007/s00248-008-9362-2

By:

Williamson, Kurt E.;
Schnitker, Jennifer B.;
Radosevich, Mark;
Smith, David W.;
Wommack, K. Eric

Publication type:

Article

Diverse Tetracycline Resistant Bacteria and Resistance Genes from Coastal Waters of Jiaozhou Bay.

Published in:

Microbial Ecology, 2008, v. 55, n. 2, p. 237, doi. 10.1007/s00248-007-9271-9

By:

Hongyue Dang;
Jing Ren;
Linsheng Song;
Song Sun;
Liguo An

Publication type:

Article

Environmental Factors that influence the Transition from Lysogenic to Lytic Existence in the ϕHSIC/ Listonella pelagia Marine Phage–Host System.

Published in:

Microbial Ecology, 2006, v. 52, n. 2, p. 217, doi. 10.1007/s00248-006-9113-1

By:

Williamson, S. J.;
Paul, J. H.

Publication type:

Article

Analysis of Diversity among 3-Chlorobenzoate-Degrading Strains of Rhodopseudomonas palustris.

Published in:

Microbial Ecology, 2004, v. 47, n. 1, p. 68, doi. 10.1007/s00248-003-1028-5

By:

Oda, Y.;
Meijer, W. G.;
Gibson, J. L.;
Gottschal, J. C.;
Forney, L. J.

Publication type:

Article

Lysogeny and Lytic Viral Production during a Bloom of the Cyanobacterium Synechococcus spp.

Published in:

Microbial Ecology, 2002, v. 43, n. 2, p. 225, doi. 10.1007/s00248-001-1058-9

By:

Ortmann, A. C.;
Lawrence, J. E.;
Suttle, C. A.

Publication type:

Article

Poland Syndrome: Description of an Atypical Variant.

Published in:

Aesthetic Plastic Surgery, 2005, v. 29, n. 1, p. 32, doi. 10.1007/s00266-004-0047-z

By:

Ferraro, G.A.;
Perrotta, A.;
Rossano, F.;
D'Andrea, F.

Publication type:

Article

Inactivation of Staphylococcus aureus by high hydrostatic pressure in saline solution and meat slurry with different initial inoculum levels.

Published in:

Food & Bioproducts Processing: Transactions of the Institution of Chemical Engineers Part C, 2015, v. 94, p. 592, doi. 10.1016/j.fbp.2014.06.005

By:

Jia Yao;
Bing Zhou;
Rongrong Wang;
Tingting Wang;
Xiaosong Hu;
Xiaojun Liao;
Yan Zhang

Publication type:

Article

Indole Derivatives Produced by the Metagenome Genes of the Escherichia coli-Harboring Marine Sponge Discodermia calyx.

Published in:

Molecules, 2017, v. 22, n. 5, p. 681, doi. 10.3390/molecules22050681

By:

Feng-Lou Liu;
Xiao-Long Yang

Publication type:

Article

Viral dynamics in two trophically different areas in the Central Adriatic Sea.

Published in:

Helgoland Marine Research, 2017, v. 71, n. 1, p. 1, doi. 10.1186/s10152-017-0502-2

By:

Ordulj, Marin;
Krstulović, Nada;
Šantić, Danijela;
Jozić, Slaven;
Šolić, Mladen

Publication type:

Article

Bastion6: a bioinformatics approach for accurate prediction of type VI secreted effectors.

Published in:

Bioinformatics, 2018, v. 34, n. 15, p. 2546, doi. 10.1093/bioinformatics/bty155

By:

Wang, Jiawei;
Yang, Bingjiao;
Leier, André;
Marquez-Lago, Tatiana T;
Hayashida, Morihiro;
Rocker, Andrea;
Zhang, Yanju;
Akutsu, Tatsuya;
Chou, Kuo-Chen;
Strugnell, Richard A

Publication type:

Article

Improved genomic island predictions with IslandPath-DIMOB.

Published in:

Bioinformatics, 2018, v. 34, n. 13, p. 2161, doi. 10.1093/bioinformatics/bty095

By:

Bertelli, Claire;
Brinkman, Fiona S L

Publication type:

Article

Temporal probabilistic modeling of bacterial compositions derived from 16S rRNA sequencing.

Published in:

Bioinformatics, 2018, v. 34, n. 3, p. 372, doi. 10.1093/bioinformatics/btx549

By:

Äijö, Tarmo;
Müller, Christian L;
Bonneau, Richard

Publication type:

Article

Hierarchical sets: analyzing pangenome structure through scalable set visualizations.

Published in:

Bioinformatics, 2017, v. 33, n. 11, p. 1604, doi. 10.1093/bioinformatics/btx034

By:

Pedersen, Thomas Lin

Publication type:

Article

TRFBA: an algorithm to integrate genome-scale metabolic and transcriptional regulatory networks with incorporation of expression data.

Published in:

Bioinformatics, 2017, v. 33, n. 7, p. 1057, doi. 10.1093/bioinformatics/btw772

By:

Motamedian, Ehsan;
Mohammadi, Maryam;
Shojaosadati, Seyed Abbas;
Heydari, Mona

Publication type:

Article

Synchronized navigation and comparative analyses across Ensembl complete bacterial genomes with INSYGHT.

Published in:

Bioinformatics, 2016, v. 32, n. 7, p. 1083, doi. 10.1093/bioinformatics/btv689

By:

Lacroix, Thomas;
Thérond, Sylvie;
Rugeri, Marc;
Nicolas, Pierre;
Gendrault, Annie;
Loux, Valentin;
Gibrat, Jean-François

Publication type:

Article

A note on the false discovery rate of novel peptides in proteogenomics.

Published in:

Bioinformatics, 2015, v. 31, n. 20, p. 3249, doi. 10.1093/bioinformatics/btv340

By:

Kun Zhang;
Yan Fu;
Wen-Feng Zeng;
Kun He;
Hao Chi;
Chao Liu;
Yan-Chang Li;
Yuan Gao;
Ping Xu;
Si-Min He

Publication type:

Article

andi: Fast and accurate estimation of evolutionary distances between closely related genomes.

Published in:

Bioinformatics, 2015, v. 31, n. 7, p. 1169, doi. 10.1093/bioinformatics/btu815

By:

Haubold, Bernhard;
Klötzl, Fabian;
Pfaffelhuber, Peter

Publication type:

Article

Novel function discovery with GeneMANIA: a new integrated resource for gene function prediction in Escherichia coli.

Published in:

Bioinformatics, 2015, v. 31, n. 3, p. 306, doi. 10.1093/bioinformatics/btu671

By:

Vlasblom, James;
Zuberi, Khalid;
Rodriguez, Harold;
Arnold, Roland;
Gagarinova, Alla;
Deineko, Viktor;
Kumar, Ashwani;
Leung, Elisa;
Rizzolo, Kamran;
Samanfar, Bahram;
Chang, Luke;
Phanse, Sadhna;
Golshani, Ashkan;
Greenblatt, Jack F.;
Houry, Walid A.;
Emili, Andrew;
Morris, Quaid;
Bader, Gary;
Babu, Mohan

Publication type:

Article

SplitMEM: a graphical algorithm for pan-genome analysis with suffix skips.

Published in:

Bioinformatics, 2014, v. 30, n. 24, p. 3476, doi. 10.1093/bioinformatics/btu756

By:

Marcus, Shoshana;
Lee, Hayan;
Schatz, Michael C.

Publication type:

Article

Comparative assembly hubs: Web-accessible browsers for comparative genomics.

Published in:

Bioinformatics, 2014, v. 30, n. 23, p. 3293, doi. 10.1093/bioinformatics/btu534

By:

Nguyen, Ngan;
Hickey, Glenn;
Raney, Brian J.;
Armstrong, Joel;
Clawson, Hiram;
Zweig, Ann;
Karolchik, Donna;
Kent, William James;
Haussler, David;
Paten, Benedict

Publication type:

Article

Absynte: a web tool to analyze the evolution of orthologous archaeal and bacterial gene clusters.

Published in:

Bioinformatics, 2011, v. 27, n. 20, p. 2905, doi. 10.1093/bioinformatics/btr473

By:

Despalins, Arnaud;
Marsit, Souhir;
Oberto, Jacques

Publication type:

Article

Automatic detection of changes in the dynamics of delayed stochastic gene networks and in vivo production of RNA molecules in Escherichia coli.

Published in:

Bioinformatics, 2011, v. 27, n. 19, p. 2714

By:

Mäkelä, Jarno;
Huttunen, Heikki;
Kandhavelu, Meenakshisundaram;
Yli-Harja, Olli;
Ribeiro, Andre S.

Publication type:

Article

Identification of prokaryotic small proteins using a comparative genomic approach.

Published in:

Bioinformatics, 2011, v. 27, n. 13, p. 1765, doi. 10.1093/bioinformatics/btr275

By:

Samayoa, Josue;
Yildiz, Fitnat H.;
Karplus, Kevin

Publication type:

Article

Alignment-free detection of local similarity among viral and bacterial genomes.

Published in:

Bioinformatics, 2011, v. 27, n. 11, p. 1466, doi. 10.1093/bioinformatics/btr176

By:

Domazet-Lošo, Mirjana;
Haubold, Bernhard

Publication type:

Article