Works matching DE "BACTERIAL gene mapping"

Results: 21

Genome Update. Let the consumer beware: Streptomyces genome sequence quality.

Published in:

Microbial Biotechnology, 2016, v. 9, n. 1, p. 3, doi. 10.1111/1751-7915.12344

By:

Studholme, David J.

Publication type:

Article

Complete Genome Sequence of Streptococcus ruminantium sp. nov. GUT-187T (=DSM104980T =JCM31869T), the Type Strain of S. ruminantium, and Comparison with Genome Sequences of Streptococcus suis Strains.

Published in:

Genome Biology & Evolution, 2018, v. 10, n. 4, p. 1180, doi. 10.1093/gbe/evy078

By:

Mari Tohya;
Tsutomu Sekizaki;
Tohru Miyoshi-Akiyama

Publication type:

Article

Differential Genomic Variation between Short- and Long-Term Bacterial Evolution Revealed by Ultradeep Sequencing.

Published in:

Genome Biology & Evolution, 2013, v. 5, n. 3, p. 572, doi. 10.1093/gbe/evt031

By:

Feng, Ye;
Chen, Hsiu-Ling;
Chiu, Cheng-Hsun

Publication type:

Article

Amplification of pico-scale DNA mediated by bacterial carrier DNA for small-cell-number transcription factor ChIP-seq.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-014-1195-4

By:

Jakobsen, Janus S.;
Bagger, Frederik O.;
Hasemann, Marie S.;
Schuster, Mikkel B.;
Frank, Anne-Katrine;
Waage, Johannes;
Vitting-Seerup, Kristoffer;
Porse, Bo T.

Publication type:

Article

TRANSIT - A Software Tool for Himar1 TnSeq Analysis.

Published in:

2015

By:

DeJesus, Michael A.;
Ambadipudi, Chaitra;
Baker, Richard;
Sassetti, Christopher;
Ioerger, Thomas R.

Publication type:

Product Review

Mapping of Mycobacterium tuberculosis Complex Genetic Diversity Profiles in Tanzania and Other African Countries.

Published in:

PLoS ONE, 2016, v. 11, n. 5, p. 1, doi. 10.1371/journal.pone.0154571

By:

Mbugi, Erasto V.;
Katale, Bugwesa Z.;
Streicher, Elizabeth M.;
Keyyu, Julius D.;
Kendall, Sharon L.;
Dockrell, Hazel M.;
Michel, Anita L.;
Rweyemamu, Mark M.;
Warren, Robin M.;
Matee, Mecky I.;
van Helden, Paul D.;
Couvin, David;
Rastogi, Nalin

Publication type:

Article

Mapping the Epistatic Network Underlying Murine Reproductive Fatpad Variation.

Published in:

Genetics, 2011, v. 187, n. 2, p. 597, doi. 10.1534/genetics.110.123505

By:

Jarvis, Joseph P.;
Cheverud, James M.

Publication type:

Article

Novel Adeno-associated Viruses Derived From Pig Tissues Transduce Most Major Organs in Mice.

Published in:

Scientific Reports, 2014, p. 1, doi. 10.1038/srep06644

By:

Bello, Alexander;
Chand, Allan;
Aviles, Jenna;
Soule, Geoff;
Auricchio, Alberto;
Kobinger, Gary P.

Publication type:

Article

S taphylococcus aureus competence genes: mapping of the SigH, ComK1 and ComK2 regulons by transcriptome sequencing.

Published in:

Molecular Microbiology, 2014, v. 94, n. 3, p. 557, doi. 10.1111/mmi.12767

By:

Fagerlund, Annette;
Granum, Per Einar;
Håvarstein, Leiv Sigve

Publication type:

Article

High density genetic mapping of Fusarium head blight resistance QTL in tetraploid wheat.

Published in:

PLoS ONE, 2018, v. 13, n. 10, p. 1, doi. 10.1371/journal.pone.0204362

By:

Sari, Ehsan;
Berraies, Samia;
Knox, Ron E.;
Singh, Asheesh K.;
Ruan, Yuefeng;
Cuthbert, Richard D.;
Pozniak, Curtis J.;
Henriquez, Maria Antonia;
Kumar, Santosh;
Burt, Andrew J.;
N’Diaye, Amidou;
Konkin, David J.;
Cabral, Adrian L.;
Campbell, Heather L.;
Wiebe, Krystalee;
Condie, Janet;
Lokuruge, Prabhath;
Meyer, Brad;
Fedak, George;
Clarke, Fran R.

Publication type:

Article

The quantitative impact of read mapping to non-native reference genomes in comparative RNA-Seq studies.

Published in:

PLoS ONE, 2017, v. 12, n. 7, p. 1, doi. 10.1371/journal.pone.0180904

By:

Price, Adam;
Gibas, Cynthia

Publication type:

Article

Associations between bacterial genotype and outcome of bovine clinical Staphylococcus aureus mastitis.

Published in:

Acta Veterinaria Scandinavica, 2014, v. 56, n. 1, p. 1, doi. 10.1186/1751-0147-56-2

By:

Lundberg, Åsa;
Aspán, Anna;
Nyman, Ann;
Unnerstad, Helle Ericsson;
Waller, Karin Persson

Publication type:

Article

Bacteriophage T5 Mutants Carrying Deletions in tRNA Gene Region.

Published in:

Molecular Biology, 2018, v. 52, n. 1, p. 1, doi. 10.1134/S0026893318010065

By:

Glukhov, A. S.;
Krutilina, A. I.;
Kaliman, A. V.;
Shlyapnikov, M. G.;
Ksenzenko, V. N.

Publication type:

Article

Trait ontology analysis based on association mapping studies bridges the gap between crop genomics and Phenomics.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12864-019-5812-0

By:

Pan, Qingchun;
Wei, Junfeng;
Guo, Feng;
Huang, Suiyong;
Gong, Yong;
Liu, Hao;
Liu, Jianxiao;
Li, Lin

Publication type:

Article

The novel Shewanella putrefaciens-infecting bacteriophage Spp001: genome sequence and lytic enzymes.

Published in:

Journal of Industrial Microbiology & Biotechnology, 2014, v. 41, n. 6, p. 1017, doi. 10.1007/s10295-014-1438-z

By:

Han, Feng;
Li, Meng;
Lin, Hong;
Wang, Jingxue;
Cao, Limin;
Khan, Muhammad

Publication type:

Article

RapGene: a fast and accurate strategy for synthetic gene assembly in Escherichia coli.

Published in:

Scientific Reports, 2015, p. 11302, doi. 10.1038/srep11302

By:

Zampini, Massimiliano;
Stevens, Pauline Rees;
Pachebat, Justin A.;
Kingston-Smith, Alison;
Mur, Luis A. J.;
Hayes, Finbarr

Publication type:

Article

Characteristics of Salmonella enterica Serovar 4,[5],12:i:- as a Monophasic Variant of Serovar Typhimurium.

Published in:

PLoS ONE, 2014, v. 9, n. 8, p. 1, doi. 10.1371/journal.pone.0104380

By:

Ido, Noriko;
Lee, Ken-ichi;
Iwabuchi, Kaori;
Izumiya, Hidemasa;
Uchida, Ikuo;
Kusumoto, Masahiro;
Iwata, Taketoshi;
Ohnishi, Makoto;
Akiba, Masato

Publication type:

Article

Short-Term Genome Stability of Serial Clostridium difficile Ribotype 027 Isolates in an Experimental Gut Model and Recurrent Human Disease

Published in:

PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0063540

By:

Eyre, David W.;
Walker, A. Sarah;
Freeman, Jane;
Baines, Simon D.;
Fawley, Warren N.;
Chilton, Caroline H.;
Griffiths, David;
Vaughan, Alison;
Crook, Derrick W.;
Peto, Tim E. A.;
Wilcox, Mark H.

Publication type:

Article

Enhanced De Novo Assembly of High Throughput Pyrosequencing Data Using Whole Genome Mapping.

Published in:

PLoS ONE, 2013, v. 8, n. 4, p. 1, doi. 10.1371/journal.pone.0061762

By:

Onmus-Leone, Fatma;
Hang, Jun;
Clifford, Robert J.;
Yang, Yu;
Riley, Matthew C.;
Kuschner, Robert A.;
Waterman, Paige E.;
Lesho, Emil P.

Publication type:

Article

Polymorphisms in early neurodevelopmental genes affect natural variation in alcohol sensitivity in adult drosophila.

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-015-2064-5

By:

Morozova, Tatiana V.;
Wen Huang;
Pray, Victoria A.;
Whitham, Thomas;
Anholt, Robert R. H.;
Mackay, Trudy F. C.

Publication type:

Article

FMAP: Functional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies.

Published in:

BMC Bioinformatics, 2016, v. 17, p. 1, doi. 10.1186/s12859-016-1278-0

By:

Jiwoong Kim;
Min Soo Kim;
Koh, Andrew Y.;
Yang Xie;
Xiaowei Zhan

Publication type:

Article

Works matching DE "BACTERIAL gene mapping"

Genome Update. Let the consumer beware: Streptomyces genome sequence quality.

Complete Genome Sequence of Streptococcus ruminantium sp. nov. GUT-187<sup>T</sup> (=DSM104980<sup>T</sup> =JCM31869<sup>T</sup>), the Type Strain of S. ruminantium, and Comparison with Genome Sequences of Streptococcus suis Strains.

Differential Genomic Variation between Short- and Long-Term Bacterial Evolution Revealed by Ultradeep Sequencing.

Amplification of pico-scale DNA mediated by bacterial carrier DNA for small-cell-number transcription factor ChIP-seq.

TRANSIT - A Software Tool for Himar1 TnSeq Analysis.

Mapping of Mycobacterium tuberculosis Complex Genetic Diversity Profiles in Tanzania and Other African Countries.

Mapping the Epistatic Network Underlying Murine Reproductive Fatpad Variation.

Novel Adeno-associated Viruses Derived From Pig Tissues Transduce Most Major Organs in Mice.

S taphylococcus aureus competence genes: mapping of the SigH, ComK1 and ComK2 regulons by transcriptome sequencing.

High density genetic mapping of Fusarium head blight resistance QTL in tetraploid wheat.

The quantitative impact of read mapping to non-native reference genomes in comparative RNA-Seq studies.

Associations between bacterial genotype and outcome of bovine clinical Staphylococcus aureus mastitis.

Bacteriophage T5 Mutants Carrying Deletions in tRNA Gene Region.

Trait ontology analysis based on association mapping studies bridges the gap between crop genomics and Phenomics.

The novel Shewanella putrefaciens-infecting bacteriophage Spp001: genome sequence and lytic enzymes.

RapGene: a fast and accurate strategy for synthetic gene assembly in Escherichia coli.

Characteristics of <i>Salmonella enterica</i> Serovar 4,[5],12:i:- as a Monophasic Variant of Serovar Typhimurium.

Short-Term Genome Stability of Serial <i>Clostridium difficile</i> Ribotype 027 Isolates in an Experimental Gut Model and Recurrent Human Disease

Enhanced De Novo Assembly of High Throughput Pyrosequencing Data Using Whole Genome Mapping.

Polymorphisms in early neurodevelopmental genes affect natural variation in alcohol sensitivity in adult drosophila.

FMAP: Functional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies.