Works matching DE "BACTERIAL evolution"

Results: 763

Pitfalls of bacterial pan-genome analysis approaches: a case study of Mycobacterium tuberculosis and two less clonal bacterial species Open Access.

Published in:

Bioinformatics, 2025, v. 41, n. 5, p. 1, doi. 10.1093/bioinformatics/btaf219

By:

Marin, Maximillian G;
Quinones-Olvera, Natalia;
Wippel, Christoph;
Behruznia, Mahboobeh;
Jeffrey, Brendan M;
Harris, Michael;
Mann, Brendon C;
Rosenthal, Alex;
Jacobson, Karen R;
Warren, Robin M;
Li, Heng;
Meehan, Conor J;
Farhat, Maha R

Publication type:

Article

Identification of an atypical replicative genetic element in Rhodococcus jostii RHA1.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1567901

By:

Acedos, Miguel G.;
de la Torre, Isabel;
Barriuso, Jorge;
García, José L.

Publication type:

Article

Deciphering the carbon and nitrogen component conversion in humification process mediated by distinct microbial mechanisms in composting from different domestic organic wastes.

Published in:

Environmental Science & Pollution Research, 2025, v. 32, n. 22, p. 13474, doi. 10.1007/s11356-024-32224-1

By:

Zhan, Yabin;
Li, Ruoqi;
Chen, Wenjie;
Chen, Yunfeng;
Yang, Li;
Liu, Bo;
Tao, Xingling;
Chen, Peizhen;
Wang, Zhigang;
Zhang, Hao;
Li, Jun;
Chang, Yuan;
Wei, Yuquan;
Li, Ji

Publication type:

Article

Simulated microgravity triggers a membrane adaptation to stress in E. coli REL606.

Published in:

BMC Microbiology, 2025, v. 25, n. 1, p. 1, doi. 10.1186/s12866-025-04064-7

By:

Lozzi, Brittney;
Adepoju, Lea;
Espinoza, Josh L.;
Padgen, Michael;
Parra, Macarena;
Ricco, Antonio;
Castro-Wallace, Sarah;
Barrick, Jeffrey E.;
O'Rourke, Aubrie

Publication type:

Article

Phenotypic plasticity in cell elongation among closely related bacterial species.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-60005-y

By:

Delaby, Marie;
Yang, Liu;
Jacq, Maxime;
Gallagher, Kelley A.;
Kysela, David T.;
Hughes, Velocity;
Pulido, Francisco;
Veyrier, Frederic J.;
VanNieuwenhze, Michael S.;
Brun, Yves V.

Publication type:

Article

The Relevance of the Predominant Clonal Evolution (PCE) Model for the Molecular Epidemiology and Subspecific Taxonomy of Trypanosoma cruzi.

Published in:

Pathogens, 2025, v. 14, n. 5, p. 407, doi. 10.3390/pathogens14050407

By:

Tibayrenc, Michel

Publication type:

Article

Insights into Chemoreceptor MCP2201-Sensing D-Malate.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 10, p. 4902, doi. 10.3390/ijms26104902

By:

Cui, Rui;
Li, Jie;
Hong, Yuan;
Guo, Lu;
Wang, Yun-Hao;
Bai, Yi-Fei;
Li, De-Feng

Publication type:

Article

Antibiotic dose and nutrient availability differentially drive the evolution of antibiotic resistance and persistence.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2024, v. 18, n. 1, p. 1, doi. 10.1093/ismejo/wrae070

By:

Windels, Etthel M;
Cool, Lloyd;
Persy, Eline;
Swinnen, Janne;
Matthay, Paul;
Van den Bergh, Bram;
Wenseleers, Tom;
Michiels, Jan

Publication type:

Article

Promoter melting by an alternative σ, one base at a time.

Published in:

Nature Structural & Molecular Biology, 2014, v. 21, n. 4, p. 350, doi. 10.1038/nsmb.2798

By:

Darst, Seth A;
Feklistov, Andrey;
Gross, Carol A

Publication type:

Article

Bacterial evolution: Getting to the bottom of Cyanobacteria.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 12, p. 818, doi. 10.1038/nrmicro3158

By:

Hofer, Ursula

Publication type:

Article

Bacterial evolution: The road to E. faecium pathogenesis.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 10, p. 662, doi. 10.1038/nrmicro3126

By:

David, Rachel

Publication type:

Article

Competition sensing: the social side of bacterial stress responses.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 4, p. 285, doi. 10.1038/nrmicro2977

By:

Cornforth, Daniel M.;
Foster, Kevin R.

Publication type:

Article

Adaptation of Pseudomonas aeruginosa to the cystic fibrosis airway: an evolutionary perspective.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 12, p. 841, doi. 10.1038/nrmicro2907

By:

Folkesson, Anders;
Jelsbak, Lars;
Yang, Lei;
Johansen, Helle Krogh;
Ciofu, Oana;
Høiby, Niels;
Molin, Søren

Publication type:

Article

Genome Watch: Natural transformers.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 9, p. 598, doi. 10.1038/nrmicro2865

By:

Chewapreecha, Claire

Publication type:

Article

Bacterial evolution: Converging on divergence.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 6, p. 378, doi. 10.1038/nrmicro2798

By:

Kåhrström, Christina Tobin

Publication type:

Article

New insights into bacterial adaptation through in vivo and in silico experimental evolution.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 5, p. 352, doi. 10.1038/nrmicro2750

By:

Hindré, Thomas;
Knibbe, Carole;
Beslon, Guillaume;
Schneider, Dominique

Publication type:

Article

Bacterial evolution: Phage resistance comes at a cost.

Published in:

Nature Reviews Microbiology, 2011, v. 9, n. 6, p. 398, doi. 10.1038/nrmicro2581

By:

Sanchez, Cesar

Publication type:

Article

Evolution and classification of the CRISPR-Cas systems.

Published in:

2011

By:

Makarova, Kira S.;
Haft, Daniel H.;
Barrangou, Rodolphe;
Brouns, Stan J. J.;
Charpentier, Emmanuelle;
Horvath, Philippe;
Moineau, Sylvain;
Mojica, Francisco J. M.;
Wolf, Yuri I.;
Yakunin, Alexander F.;
van der Oost, John;
Koonin, Eugene V.

Publication type:

Opinion

Evolution: Bacterial endocytosis uncovered.

Published in:

Nature Reviews Microbiology, 2010, v. 8, n. 8, p. 534, doi. 10.1038/nrmicro2408

By:

Jermy, Andrew

Publication type:

Article

Evolution: Bacteria fight it out.

Published in:

Nature Reviews Microbiology, 2010, v. 8, n. 8, p. 536, doi. 10.1038/nrmicro2412

By:

Molloy, Sheilagh

Publication type:

Article

Detecting genomic islands using bioinformatics approaches.

Published in:

Nature Reviews Microbiology, 2010, v. 8, n. 5, p. 373, doi. 10.1038/nrmicro2350

By:

Langille, Morgan G. I.;
Hsiao, William W. L.;
Brinkman, Fiona S. L.

Publication type:

Article

Of trees and networks.

Published in:

Nature Reviews Microbiology, 2009, v. 7, n. 10, p. 691, doi. 10.1038/nrmicro2227

By:

Vernikos, Georgios S.

Publication type:

Article

Biofilms: How does your biofilm grow?

Published in:

Nature Reviews Microbiology, 2007, v. 5, n. 3, p. 168, doi. 10.1038/nrmicro1626

By:

Jones, Susan

Publication type:

Article

H-NS, the genome sentinel.

Published in:

Nature Reviews Microbiology, 2007, v. 5, n. 2, p. 157, doi. 10.1038/nrmicro1598

By:

Dorman, Charles J.

Publication type:

Article

Integrons: agents of bacterial evolution.

Published in:

Nature Reviews Microbiology, 2006, v. 4, n. 8, p. 608, doi. 10.1038/nrmicro1462

By:

Mazel, Didier

Publication type:

Article

Non-inherited antibiotic resistance.

Published in:

Nature Reviews Microbiology, 2006, v. 4, n. 7, p. 556, doi. 10.1038/nrmicro1445

By:

Levin, Bruce R.;
Rozen, Daniel E.

Publication type:

Article

A small leap for adaptation.

Published in:

Nature Reviews Microbiology, 2006, v. 4, n. 5, p. 322, doi. 10.1038/nrmicro1421

By:

Casci, Tanita

Publication type:

Article

Analysis of the speciation process suggests a dual lifestyle in the plant pathogen Ralstonia solanacearum species complex.

Published in:

European Journal of Plant Pathology, 2023, v. 166, n. 2, p. 251, doi. 10.1007/s10658-023-02670-7

By:

Castillo, José A.

Publication type:

Article

Signal transduction and adaptive regulation through bacterial two-component systems: the Escherichia coli AtoSC paradigm.

Published in:

Amino Acids, 2009, v. 37, n. 3, p. 443

By:

Ekaterini Tiligada

Publication type:

Article

Efficient inference of bacterial strain trees from genome-scale multilocus data.

Published in:

Bioinformatics, 2008, v. 24, n. 13, p. i123, doi. 10.1093/bioinformatics/btn149

By:

C. Than;
R. Sugino;
H. Innan;
L. Nakhleh

Publication type:

Article

Evolution: Parallel evolution of pathogenic Yersinia.

Published in:

Nature Reviews Genetics, 2014, v. 15, n. 6, p. 363, doi. 10.1038/nrg3752

By:

Jones, Bryony

Publication type:

Article

Development: Germ plasm 'fuels' vertebrate evolution.

Published in:

Nature Reviews Genetics, 2014, v. 15, n. 6, p. 364, doi. 10.1038/nrg3737

By:

Koch, Linda

Publication type:

Article

Phage Therapy: Challenges and Opportunities.

Published in:

Fine Focus, 2022, v. 8, n. 1, p. 12, doi. 10.33043/ff.8.1.12-35

By:

Ratnakar, Immadi Siva

Publication type:

Article

ANTIBIOTIC RESISTANT BACTERIA IN AN URBAN FRESHWATER ECOSYSTEM IN CENTRAL TEXAS.

Published in:

Fine Focus, 2017, v. 3, n. 2, p. 113

By:

KWOK, ANNIE;
DAVIS, MICHAEL C.;
SANGHOON KANG

Publication type:

Article

Cells: from fossils to flagellates.

Published in:

2016

By:

FORD, BRIAN J.

Publication type:

Book Review

Rapid evolution of a bacterial parasite during outbreaks in two Daphnia populations.

Published in:

Ecology & Evolution (20457758), 2023, v. 13, n. 1, p. 1, doi. 10.1002/ece3.9676

By:

Shaw, Clara L.;
Duffy, Meghan A.

Publication type:

Article

Experimental evolution of bacterial survival on metallic copper.

Published in:

Ecology & Evolution (20457758), 2022, v. 12, n. 8, p. 1, doi. 10.1002/ece3.9225

By:

Xu, Feng;
Liu, Sha;
Naren, Naran;
Li, Lily;
Ma, Luyan Z.;
Zhang, Xue‐Xian

Publication type:

Article

Magnetotactic Bacteria: From Evolution to Biomineralization and Biomedical Applications.

Published in:

Minerals (2075-163X), 2022, v. 12, n. 11, p. 1403, doi. 10.3390/min12111403

By:

Strbak, Oliver;
Hnilicova, Petra;
Gombos, Jan;
Lokajova, Alica;
Kopcansky, Peter

Publication type:

Article

Exploring Viral Interactions in Clavibacter Species: In Silico Analysis of Prophage Prevalence and Antiviral Defenses.

Published in:

Life (2075-1729), 2025, v. 15, n. 2, p. 187, doi. 10.3390/life15020187

By:

Rubí-Rangel, Lucía Margarita;
León-Félix, Josefina;
Villicaña, Claudia

Publication type:

Article

Asymmetric gene flow and constraints on adaptation caused by sex ratio distorters.

Published in:

Journal of Evolutionary Biology, 2006, v. 19, n. 3, p. 869, doi. 10.1111/j.1420-9101.2005.01049.x

By:

TELSCHOW, A.;
ENGELSTÄDTER, J.;
YAMAMURA, N.;
HAMMERSTEIN, P.;
HURST, G. D. D.

Publication type:

Article

Horizontal transfer and phylogenetic distribution of the immune evasion factor tarP.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.951333

By:

Gerlach, David;
Sieber, Raphael N.;
Larsen, Jesper;
Krusche, Janes;
De Castro, Cristina;
Baumann, Juliane;
Molinaro, Antonio;
Peschel, Andreas

Publication type:

Article

The transcriptional regulator CtrA controls gene expression in Alphaproteobacteria phages: Evidence for a lytic deferment pathway.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.918015

By:

Mascolo, Elia;
Adhikari, Satish;
Caruso, Steven M.;
deCarvalho, Tagide;
Folch Salvador, Anna;
Serra-Sagristà, Joan;
Ry Young;
Erill, Ivan;
Curtis, Patrick D.

Publication type:

Article

Enhancing control of multidrug-resistant plasmid and its host community with a prolonged thermophilic phase during composting.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.989085

By:

Lei Shen;
Tianlei Qiu;
Yajie Guo;
Min Gao;
Haoze Gao;
Guozhu Zhao;
Xuming Wang

Publication type:

Article

Bacteriophages: Underestimated vehicles of antibiotic resistance genes in the soil.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.936267

By:

Yue Zhang;
Yajie Guo;
Tianlei Qiu;
Min Gao;
Xuming Wang

Publication type:

Article

Prophage Diversity Across Salmonella and Verotoxin-Producing Escherichia coli in Agricultural Niches of British Columbia, Canada.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.853703

By:

Karen Fong;
Yu Tong Lu;
Brenner, Thomas;
Falardeau, Justin;
Siyun Wang

Publication type:

Article

Lytic Bacteriophage PZL-Ah152 as Biocontrol Measures Against Lethal Aeromonas hydrophila Without Distorting Gut Microbiota.

Published in:

Frontiers in Microbiology, 2022, v. 12, p. 1, doi. 10.3389/fmicb.2022.898961

By:

Chao Feng;
Kaixiang Jia;
Teng Chi;
Shuaimin Chen;
Huabo Yu;
Liang Zhang;
Raza, Sayed Haidar Abbas;
Alshammari, Ahmed Mohajja;
Shuang Liang;
Zishan Zhu;
Tingxuan Li;
Yanling Qi;
Xiaofeng Shan;
Aidong Qian;
Dongxing Zhang;
Lei Zhang;
Wuwen Sun

Publication type:

Article

IS 6110 Copy Number in Multi-Host Mycobacterium bovis Strains Circulating in Bovine Tuberculosis Endemic French Regions.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.891902

By:

Charles, Ciriac;
Conde, Cyril;
Biet, Franck;
Boschiroli, Maria Laura;
Michelet, Lorraine

Publication type:

Article

Editorial: The Role of Mobile Genetic Elements in Bacterial Evolution and Their Adaptability.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.849667

By:

Vale, Filipa F.;
Lehours, Philippe;
Yamaoka, Yoshio

Publication type:

Article

End-Stage Renal Disease-Associated Gut Bacterial Translocation: Evolution and Impact on Chronic Inflammation and Acute Rejection After Renal Transplantation.

Published in:

Frontiers in Immunology, 2019, p. 1, doi. 10.3389/fimmu.2019.01630

By:

Carron, Clémence;
Pais de Barros, Jean-Paul;
Gaiffe, Emilie;
Deckert, Valérie;
Adda-Rezig, Hanane;
Roubiou, Caroline;
Laheurte, Caroline;
Masson, David;
Simula-Faivre, Dominique;
Louvat, Pascale;
Moulin, Bruno;
Frimat, Luc;
Rieu, Philippe;
Mousson, Christiane;
Durrbach, Antoine;
Heng, Anne-Elisabeth;
Saas, Philippe;
Ducloux, Didier;
Lagrost, Laurent;
Bamoulid, Jamal

Publication type:

Article

The association between the genetic structures of commonly incompatible plasmids in Gram-negative bacteria, their distribution and the resistance genes.

Published in:

Frontiers in Cellular & Infection Microbiology, 2024, p. 1, doi. 10.3389/fcimb.2024.1472876

By:

Fang, Lei;
Chen, Ruyan;
Li, Chenyu;
Sun, Jingjing;
Liu, Ruishan;
Shen, Yanhao;
Guo, Xiaobing

Publication type:

Article