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Identification and characterization of two Bacillus anthracis bacteriophages.
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- Archives of Virology, 2024, v. 169, n. 7, p. 1, doi. 10.1007/s00705-024-06005-7
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Tools and methodology to in silico phage discovery in freshwater environments.
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- Frontiers in Microbiology, 2024, p. 1, doi. 10.3389/fmicb.2024.1390726
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Pseudomonas putida Dynamics of Adaptation under Prolonged Resource Exhaustion.
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- Genome Biology & Evolution, 2024, v. 16, n. 6, p. 1, doi. 10.1093/gbe/evae117
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Examining the Effects of Temperature on the Evolution of Bacterial tRNA Pools.
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- Genome Biology & Evolution, 2024, v. 16, n. 6, p. 1, doi. 10.1093/gbe/evae116
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Stochasticity, determinism, and contingency shape genome evolution of endosymbiotic bacteria.
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- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-48784-2
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Exploring the evolution of bacterial cellulose precursors and their potential use as cellulose-based building blocks.
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- Scientific Reports, 2024, v. 11, n. 1, p. 1, doi. 10.1038/s41598-024-62462-9
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Limits on the evolutionary rates of biological traits.
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- Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-61872-z
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Stability analysis and Bifurcation for an Bacterial Meningitis Spreading with Stage Structure: Mathematical Modeling.
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- Iraqi Journal of Science, 2024, v. 65, n. 5, p. 2630, doi. 10.24996/ijs.2024.65.5.23
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Moving toward the Inclusion of Epigenomics in Bacterial Genome Evolution: Perspectives and Challenges.
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- International Journal of Molecular Sciences, 2024, v. 25, n. 8, p. 4425, doi. 10.3390/ijms25084425
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Oligomerization of the IHF Protein in the Presence of Metal Cations.
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- Crystallography Reports, 2024, v. 69, n. 2, p. 206, doi. 10.1134/S1063774524600133
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Mutational Signatures in Wild Type Escherichia coli Strains Reveal Predominance of DNA Polymerase Errors.
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- Genome Biology & Evolution, 2024, v. 16, n. 4, p. 1, doi. 10.1093/gbe/evae035
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The spontaneously produced lysogenic prophage phi456 promotes bacterial resistance to adverse environments and enhances the colonization ability of avian pathogenic Escherichia coli strain DE456.
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- Veterinary Research, 2024, v. 55, n. 1, p. 1, doi. 10.1186/s13567-024-01292-z
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Occurrence and mechanisms of tigecycline resistance in carbapenem- and colistin-resistant Klebsiella pneumoniae in Thailand.
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- Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-55705-2
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- Article
Oxidative Damage and Antioxidant Response of Acinetobacter calcoaceticus, Pseudomonas putida and Rhodococcus erythropolis Bacteria during Antibiotic Treatment.
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- Applied Biochemistry & Microbiology, 2024, v. 60, n. 1, p. 64, doi. 10.1134/S0003683824010162
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Digest: The importance of genetic background in bacterial evolution.
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- Evolution, 2024, v. 78, n. 3, p. 593, doi. 10.1093/evolut/qpad225
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Editorial: The oral-gut axis: from ectopic colonization to within-host evolution of oral bacteria.
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- Frontiers in Cellular & Infection Microbiology, 2024, p. 1, doi. 10.3389/fcimb.2024.1378237
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Microbial divergence and evolution. The case of anammox bacteria.
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- Frontiers in Microbiology, 2024, p. 1, doi. 10.3389/fmicb.2024.1355780
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Phage-plasmids promote recombination and emergence of phages and plasmids.
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- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-45757-3
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VariantDetective: an accurate all-in-one pipeline for detecting consensus bacterial SNPs and SVs.
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- Bioinformatics, 2024, v. 40, n. 2, p. 1, doi. 10.1093/bioinformatics/btae066
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No Evidence that Selection on Synonymous Codon Usage Affects Patterns of Protein Evolution in Bacteria.
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- Genome Biology & Evolution, 2024, v. 16, n. 2, p. 1, doi. 10.1093/gbe/evad232
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A 2000-Year-Old Bacillus stercoris Strain Sheds Light on the Evolution of Cyclic Antimicrobial Lipopeptide Synthesis.
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- Microorganisms, 2024, v. 12, n. 2, p. 338, doi. 10.3390/microorganisms12020338
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Adaptive Evolution of Pseudomonas aeruginosa in Human Airways Shows Phenotypic Convergence Despite Diverse Patterns of Genomic Changes.
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- Molecular Biology & Evolution, 2024, v. 41, n. 2, p. 1, doi. 10.1093/molbev/msae022
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Modeling stress-induced responses: plasticity in continuous state space and gradual clonal evolution.
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- Theory in Biosciences, 2024, v. 143, n. 1, p. 63, doi. 10.1007/s12064-023-00410-3
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Fe‐modified biochar improved the stability of soil aggregates and organic carbon: Evidence from enzymatic activity and microbial composition.
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- Land Degradation & Development, 2024, v. 35, n. 2, p. 732, doi. 10.1002/ldr.4948
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Humic acid biosynthesis and bacterial community evolution during aerobic composting of rice straw.
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- Applied Microbiology & Biotechnology, 2024, v. 108, n. 1, p. 1, doi. 10.1007/s00253-023-12994-3
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- Article
Study of the Antibacterial Activity of Superhydrophilic and Superhydrophobic Copper Substrates against Multi-Drug-Resistant Hospital-Acquired Pseudomonas aeruginosa Isolates.
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- International Journal of Molecular Sciences, 2024, v. 25, n. 2, p. 779, doi. 10.3390/ijms25020779
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Laboratory Evolution of Antimicrobial Resistance in Bacteria to Develop Rational Treatment Strategies.
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- Antibiotics (2079-6382), 2024, v. 13, n. 1, p. 94, doi. 10.3390/antibiotics13010094
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Microbial evolution through horizontal gene transfer by mobile genetic elements.
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- Microbial Biotechnology, 2024, v. 17, n. 1, p. 1, doi. 10.1111/1751-7915.14408
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Structural insights into the regulation, ligand recognition, and oligomerization of bacterial STING.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-44052-x
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- Article
Expand and Sensitize: Guanidine‐Functionalized Exopolysaccharide Nanoparticles Cause Bacterial Cell Expansion and Antibiotic Sensitization.
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- Advanced Functional Materials, 2023, v. 33, n. 51, p. 1, doi. 10.1002/adfm.202305977
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Evolution towards simplicity in bacterial small heat shock protein system.
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- eLife, 2023, p. 1, doi. 10.7554/eLife.89813
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Evolutionary Algorithms in a Bacterial Consortium of Synthetic Bacteria.
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- Algorithms, 2023, v. 16, n. 12, p. 571, doi. 10.3390/a16120571
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Antibiotic Resistance: Do We Need Only Cutting-Edge Methods, or Can New Visions Such as One Health Be More Useful for Learning from Nature?
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- Antibiotics (2079-6382), 2023, v. 12, n. 12, p. 1694, doi. 10.3390/antibiotics12121694
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Genetics and Genomics: two sides of the same coin: Bacterial Genetics and Genomics Lori A. S. Snyder CRC Press, Boca Raton, USA, 2020, 389 pages, ISBN13: 978-0815345695 Reviewed by R. HARINARAYANAN.
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- Journal of Genetics, 2023, v. 102, n. 2, p. 1, doi. 10.1007/s12041-023-01430-0
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- Article
Transposon-aided capture (TRACA) of plasmids from the human gut.
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- Letters in Applied Microbiology, 2023, v. 76, n. 12, p. 1, doi. 10.1093/lambio/ovad132
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VBCG: 20 validated bacterial core genes for phylogenomic analysis with high fidelity and resolution.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01705-9
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- Article
Host-associated transmission favors transition of a commensal toward antagonism.
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- Evolution, 2023, v. 77, n. 11, p. 2512, doi. 10.1093/evolut/qpad173
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Machine Learning Suggests That Small Size Helps Broaden Plasmid Host Range.
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- Genes, 2023, v. 14, n. 11, p. 2044, doi. 10.3390/genes14112044
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Comparative Genomics Reveals Three Genetic Groups of the Whitefly Obligate Endosymbiont Candidatus Portiera aleyrodidarum.
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- Insects (2075-4450), 2023, v. 14, n. 11, p. 888, doi. 10.3390/insects14110888
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Evolutionary and ecological role of extracellular contractile injection systems: from threat to weapon.
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- Frontiers in Microbiology, 2023, p. 01, doi. 10.3389/fmicb.2023.1264877
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Genetic characteristics and integration specificity of Salmonella enterica temperate phages.
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- Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1199843
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Advancing evolution: Bacteria break down gene silencer to express horizontally acquired genes.
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- BioEssays, 2023, v. 45, n. 10, p. 1, doi. 10.1002/bies.202300062
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Bioinformatic Analysis Reveals the Role of Translation Elongation Efficiency Optimisation in the Evolution of Ralstonia Genus.
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- Biology (2079-7737), 2023, v. 12, n. 10, p. 1338, doi. 10.3390/biology12101338
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Dynamic Evolution of Bacterial Ligand Recognition by Formyl Peptide Receptors.
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- Genome Biology & Evolution, 2023, v. 15, n. 10, p. 1, doi. 10.1093/gbe/evad175
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- Article
Unique trans-kingdom microbiome structural and functional signatures predict cognitive decline in older adults.
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- GeroScience, 2023, v. 45, n. 5, p. 2819, doi. 10.1007/s11357-023-00799-1
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Response of bacterial community characteristics in the rhizosphere soil of Stellera chamaejasme L. to its expansion on the Qinghai‐Tibet Plateau.
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- Land Degradation & Development, 2023, v. 34, n. 16, p. 5135, doi. 10.1002/ldr.4835
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- Article
Comparative genomics of Mollicutes-related endobacteria supports a late invasion into Mucoromycota fungi.
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- Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05299-8
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- Article
Transient eco-evolutionary dynamics early in a phage epidemic have strong and lasting impact on the long-term evolution of bacterial defences.
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- PLoS Biology, 2023, v. 21, n. 9, p. 1, doi. 10.1371/journal.pbio.3002122
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Bacterial motility can govern the dynamics of antibiotic resistance evolution.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-41196-8
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- Article
Comparative genomic assessment of members of genus Tenacibaculum: an exploratory study.
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- Molecular Genetics & Genomics, 2023, v. 298, n. 5, p. 979, doi. 10.1007/s00438-023-02031-3
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