Works matching DE "BACTERIAL adaptation"

Results: 444

Effect of Cultivation Conditions on the Expression of the Exiguobacterium sibiricum Proteorhodopsin Gene.

Published in:

Biochemistry (00062979), 2025, v. 90, n. 7, p. 911, doi. 10.1134/S0006297925600917

By:

Petrovskaya, Lada E.;
Spirina, Elena V.;
Sukhanov, Artemiy Yu.;
Kryukova, Elena A.;
Lukashev, Evgeniy P.;
Ziganshin, Rustam H.;
Rivkina, Elizaveta M.;
Dolgikh, Dmitrii A.;
Kirpichnikov, Mikhail P.

Publication type:

Article

Significance and roles of synonymous codon usage in the evolutionary process of Proteus.

Published in:

Journal of Basic Microbiology, 2020, v. 60, n. 5, p. 424, doi. 10.1002/jobm.201900647

By:

Jin, Li;
Gao, Han;
Cao, Xiaoan;
Han, Shengyi;
Xu, Long;
Ma, Zhongren;
Shang, Youjun;
Ma, Xiao‐xia

Publication type:

Article

Spatial Patterns of bphA Gene Diversity Reveal Local Adaptation of Microbial Communities to PCB and PAH Contaminants.

Published in:

Microbial Ecology, 2016, v. 72, n. 3, p. 559, doi. 10.1007/s00248-016-0812-y

By:

Hoostal, Matthew;
Bouzat, Juan

Publication type:

Article

Environment-Related Adaptive Changes of Gut Commensal Microbiota Do not Alter Colonic Toll-Like Receptors but Modulate the Local Expression of Sensory-Related Systems in Rats.

Published in:

Microbial Ecology, 2013, v. 66, n. 1, p. 232, doi. 10.1007/s00248-013-0241-0

By:

Aguilera, M.;
Vergara, P.;
Martínez, V.

Publication type:

Article

PaReBrick: PArallel REarrangements and BReaks identification toolkit.

Published in:

Bioinformatics, 2022, v. 38, n. 2, p. 357, doi. 10.1093/bioinformatics/btab691

By:

Zabelkin, Alexey;
Yakovleva, Yulia;
Bochkareva, Olga;
Alexeev, Nikita

Publication type:

Article

gplas: a comprehensive tool for plasmid analysis using short-read graphs.

Published in:

Bioinformatics, 2020, v. 36, n. 12, p. 3874, doi. 10.1093/bioinformatics/btaa233

By:

Arredondo-Alonso, Sergio;
Bootsma, Martin;
Hein, Yaïr;
Rogers, Malbert R C;
Corander, Jukka;
Willems, Rob J L;
Schürch, Anita C

Publication type:

Article

Lipase-mediated detoxification of host-derived antimicrobial fatty acids by Staphylococcus aureus.

Published in:

Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-06278-3

By:

Kengmo Tchoupa, Arnaud;
Elsherbini, Ahmed M. A.;
Camus, Justine;
Fu, Xiaoqing;
Hu, Xuanheng;
Ghaneme, Oumayma;
Seibert, Lea;
Lebtig, Marco;
Böcker, Marieke A.;
Horlbeck, Anima;
Lambidis, Stilianos P.;
Schittek, Birgit;
Kretschmer, Dorothee;
Lämmerhofer, Michael;
Peschel, Andreas

Publication type:

Article

Novel WYL domain-containing transcriptional activator acts in response to genotoxic stress in rapidly growing mycobacteria.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-05592-6

By:

Keller, Lena Maria Leone;
Flattich, Kim;
Weber-Ban, Eilika

Publication type:

Article

Molecular evolution: Adaptation by loss of function.

Published in:

Nature Reviews Genetics, 2013, v. 14, n. 9, p. 596, doi. 10.1038/nrg3557

By:

Stower, Hannah

Publication type:

Article

Thermotolerant Probiotic—The Potential of Improving the Survivability of Beneficial Bacteria.

Published in:

Fermentation (Basel), 2025, v. 11, n. 6, p. 313, doi. 10.3390/fermentation11060313

By:

Zielińska, Dorota;
Krawczyk, Miłosz;
Neffe-Skocińska, Katarzyna

Publication type:

Article

Impact of Soluble and Exchangeable Concentrations of Elements in Surface Sediments from Recreational Areas on Culturable Bacterial Behaviors.

Published in:

Analytical Letters, 2025, v. 58, n. 12, p. 2132, doi. 10.1080/00032719.2024.2372674

By:

Saygin, Hasan;
Baysal, Asli;
Ekinci, Mustafa

Publication type:

Article

Pseudomonas aeruginosa Consumption of Airway Metabolites Promotes Lung Infection.

Published in:

Pathogens, 2021, v. 10, n. 8, p. 957, doi. 10.3390/pathogens10080957

By:

Riquelme, Sebastián A.;
Prince, Alice

Publication type:

Article

Transformation of Helicobacter pylori into Coccoid Forms as a Challenge for Research Determining Activity of Antimicrobial Substances.

Published in:

Pathogens, 2020, v. 9, n. 3, p. 184, doi. 10.3390/pathogens9030184

By:

Krzyżek, Paweł;
Grande, Rossella

Publication type:

Article

Piscirickettsia salmonis Cryptic Plasmids: Source of Mobile DNA and Virulence Factors.

Published in:

Pathogens, 2019, v. 8, n. 4, p. 269, doi. 10.3390/pathogens8040269

By:

Ortiz-Severín, Javiera;
Travisany, Dante;
Maass, Alejandro;
P. Chávez, Francisco;
Cambiazo, Verónica

Publication type:

Article

In Situ Characterization of Hfq Bacterial Amyloid: A Fourier-Transform Infrared Spectroscopy Study.

Published in:

Pathogens, 2019, v. 8, n. 1, p. 36, doi. 10.3390/pathogens8010036

By:

Partouche, David;
Militello, Valeria;
Gomez-Zavaglia, Andrea;
Wien, Frank;
Sandt, Christophe;
Arluison, Véronique

Publication type:

Article

Host Serum Amyloid A1 Facilitates Streptococcus pneumoniae Adaptation to Acidic Stress Induced by Pneumococcal Anaerobic Metabolism.

Published in:

Microorganisms, 2025, v. 13, n. 6, p. 1309, doi. 10.3390/microorganisms13061309

By:

Gong, Weichen;
Ono, Masayuki;
Sumitomo, Tomoko;
Kobayashi, Momoko;
Hirose, Yujiro;
Kawabata, Shigetada

Publication type:

Article

The VapBC-4 Characterization Indicates It Is a Bona Fide Toxin-Antitoxin Module of Leptospira interrogans : Initial Evidence for a Role in Bacterial Adaptation.

Published in:

Microorganisms, 2025, v. 13, n. 4, p. 879, doi. 10.3390/microorganisms13040879

By:

Azevedo, Bruna Oliveira Pigatto;
Damiano, Deborah Kohn;
Teixeira, Aline Florencio;
Nascimento, Ana Lucia Tabet Oller;
Fernandes, Luis Guilherme Virgilio;
Lopes, Alexandre Paulo Yague

Publication type:

Article

It Takes Two to Make a Thing Go Right: Epistasis, Two-Component Response Systems, and Bacterial Adaptation.

Published in:

Microorganisms, 2024, v. 12, n. 10, p. 2000, doi. 10.3390/microorganisms12102000

By:

Sanders, Brittany R.;
Thomas, Lauren S.;
Lewis, Naya M.;
Ferguson, Zaria A.;
Graves Jr., Joseph L.;
Thomas, Misty D.

Publication type:

Article

L-Rhamnose Globally Changes the Transcriptome of Planktonic and Biofilm Escherichia coli Cells and Modulates Biofilm Growth.

Published in:

Microorganisms, 2024, v. 12, n. 9, p. 1911, doi. 10.3390/microorganisms12091911

By:

Hantus, Charlotte E.;
Moppel, Isabella J.;
Frizzell, Jenna K.;
Francis, Anna E.;
Nagashima, Kyogo;
Ryno, Lisa M.

Publication type:

Article

Enrichment of Aerobic and Anaerobic Hydrocarbon-Degrading Bacteria from Multicontaminated Marine Sediment in Mar Piccolo Site (Taranto, Italy).

Published in:

Microorganisms, 2023, v. 11, n. 11, p. 2782, doi. 10.3390/microorganisms11112782

By:

Matturro, Bruna;
Di Franca, Maria Letizia;
Tonanzi, Barbara;
Cruz Viggi, Carolina;
Aulenta, Federico;
Di Leo, Magda;
Giandomenico, Santina;
Rossetti, Simona

Publication type:

Article

Comparison of Structural Features of CRISPR-Cas Systems in Thermophilic Bacteria.

Published in:

Microorganisms, 2023, v. 11, n. 9, p. 2275, doi. 10.3390/microorganisms11092275

By:

Wang, Chuan;
Yang, Yuze;
Tang, Shaoqing;
Liu, Yuanzi;
Wei, Yaqin;
Wan, Xuerui;
Liu, Yajuan;
Zhang, Zhao;
Sunkang, Yongjie

Publication type:

Article

Bioluminescence Contributes to the Adaptation of Deep-Sea Bacterium Photobacterium phosphoreum ANT-2200 to High Hydrostatic Pressure.

Published in:

Microorganisms, 2023, v. 11, n. 6, p. 1362, doi. 10.3390/microorganisms11061362

By:

Bao, Xu-Chong;
Tang, Hong-Zhi;
Li, Xue-Gong;
Li, An-Qi;
Qi, Xiao-Qing;
Li, Deng-Hui;
Liu, Shan-Shan;
Wu, Long-Fei;
Zhang, Wei-Jia

Publication type:

Article

Relationship between the Chromosome Structural Dynamics and Gene Expression—A Chicken and Egg Dilemma?

Published in:

Microorganisms, 2022, v. 10, n. 5, p. 846, doi. 10.3390/microorganisms10050846

By:

Le Berre, Diana;
Reverchon, Sylvie;
Muskhelishvili, Georgi;
Nasser, William

Publication type:

Article

The Natural History of Integrons.

Published in:

Microorganisms, 2021, v. 9, n. 11, p. 2212, doi. 10.3390/microorganisms9112212

By:

Ghaly, Timothy M.;
Gillings, Michael R.;
Penesyan, Anahit;
Qi, Qin;
Rajabal, Vaheesan;
Tetu, Sasha G.

Publication type:

Article

Mycobacterium tuberculosis Small RNA MTS1338 Confers Pathogenic Properties to Non-Pathogenic Mycobacterium smegmatis.

Published in:

Microorganisms, 2021, v. 9, n. 2, p. 414, doi. 10.3390/microorganisms9020414

By:

Bychenko, Oksana;
Skvortsova, Yulia;
Ziganshin, Rustam;
Grigorov, Artem;
Aseev, Leonid;
Ostrik, Albina;
Kaprelyants, Arseny;
Salina, Elena G.;
Azhikina, Tatyana;
Esin, Semih

Publication type:

Article

Amplifying and Fine-Tuning Rsm sRNAs Expression and Stability to Optimize the Survival of Pseudomonas brassicacerum in Nutrient-Poor Environments.

Published in:

Microorganisms, 2021, v. 9, n. 2, p. 250, doi. 10.3390/microorganisms9020250

By:

Lalaouna, David;
Fochesato, Sylvain;
Harir, Mourad;
Ortet, Philippe;
Schmitt-Kopplin, Philippe;
Heulin, Thierry;
Achouak, Wafa;
Malone, Jacob G.

Publication type:

Article

Quorum Sensing Regulation in Phytopathogenic Bacteria.

Published in:

Microorganisms, 2021, v. 9, n. 2, p. 239, doi. 10.3390/microorganisms9020239

By:

Baltenneck, Julie;
Reverchon, Sylvie;
Hommais, Florence;
Abraham, Wolf-Rainer

Publication type:

Article

An Intertwined Network of Regulation Controls Membrane Permeability Including Drug Influx and Efflux in Enterobacteriaceae.

Published in:

Microorganisms, 2020, v. 8, n. 6, p. 833, doi. 10.3390/microorganisms8060833

By:

Ferrand, Aurélie;
Vergalli, Julia;
Pagès, Jean-Marie;
Davin-Regli, Anne

Publication type:

Article

Coherent Domains of Transcription Coordinate Gene Expression During Bacterial Growth and Adaptation.

Published in:

Microorganisms, 2019, v. 7, n. 12, p. 694, doi. 10.3390/microorganisms7120694

By:

Muskhelishvili, Georgi;
Forquet, Raphaël;
Reverchon, Sylvie;
Meyer, Sam;
Nasser, William

Publication type:

Article

Taking Advantage of Bacterial Adaptation in Order to Optimize Industrial Production of Dry Propionibacterium freudenreichii.

Published in:

Microorganisms, 2019, v. 7, n. 10, p. 477, doi. 10.3390/microorganisms7100477

By:

Gaucher, Floriane;
Gagnaire, Valérie;
Rabah, Houem;
Maillard, Marie-Bernadette;
Bonnassie, Sylvie;
Pottier, Sandrine;
Marchand, Pierre;
Jan, Gwénaël;
Blanc, Philippe;
Jeantet, Romain

Publication type:

Article

Temporal Dynamics in Rumen Bacterial Community Composition of Finishing Steers during an Adaptation Period of Three Months.

Published in:

Microorganisms, 2019, v. 7, n. 10, p. 410, doi. 10.3390/microorganisms7100410

By:

Qiu, Qinghua;
Gao, Chaoyu;
Gao, Zhibiao;
Rahman, Muhammad Aziz ur;
He, Yang;
Cao, Binghai;
Su, Huawei

Publication type:

Article

Metabolic Modeling of Pectobacterium parmentieri SCC3193 Provides Insights into Metabolic Pathways of Plant Pathogenic Bacteria.

Published in:

Microorganisms, 2019, v. 7, n. 4, p. 101, doi. 10.3390/microorganisms7040101

By:

Zoledowska, Sabina;
Presta, Luana;
Fondi, Marco;
Decorosi, Francesca;
Giovannetti, Luciana;
Mengoni, Alessio;
Lojkowska, Ewa

Publication type:

Article

The landscape of transcriptional and translational changes over 22 years of bacterial adaptation.

Published in:

eLife, 2022, p. 1, doi. 10.7554/eLife.81979

By:

Favate, John S.;
Shun Liang;
Cope, Alexander L.;
Yadavalli, Srujana S.;
Shah, Premal

Publication type:

Article

Niche-specific genome degradation and convergent evolution shaping Staphylococcus aureus adaptation during severe infections.

Published in:

eLife, 2022, p. 1, doi. 10.7554/eLife.77195

By:

Giulieri, Stefano G.;
Guérillot, Romain;
Duchene, Sebastian;
Hachani, Abderrahman;
Daniel, Diane;
Seemann, Torsten;
Davis, Joshua S.;
Tong, Steven Y. C.;
Young, Bernadette C.;
Wilson, Daniel J.;
Stinear, Timothy P.;
Howden, Benjamin P.

Publication type:

Article

Inactivation of group II intron RmInt1 in the Sinorhizobium meliloti genome.

Published in:

Scientific Reports, 2015, p. 12036, doi. 10.1038/srep12036

By:

Dolores Molina-Sánchez, María;
Toro, Nicolás

Publication type:

Article

Growth Performance, Carcass Quality and Gut Microbiome of Finishing Stage Pigs Fed Formulated Protein-Energy Nutrients Balanced Diet with Banana Agro-Waste Silage.

Published in:

Life (2075-1729), 2025, v. 15, n. 7, p. 1033, doi. 10.3390/life15071033

By:

Chou, Lan-Szu;
Lo, Chih-Yu;
Huang, Chien-Jui;
Huang, Hsien-Juang;
Chang, Shen-Chang;
Weng, Brian Bor-Chun;
Hsieh, Chia-Wen

Publication type:

Article

Exploring Viral Interactions in Clavibacter Species: In Silico Analysis of Prophage Prevalence and Antiviral Defenses.

Published in:

Life (2075-1729), 2025, v. 15, n. 2, p. 187, doi. 10.3390/life15020187

By:

Rubí-Rangel, Lucía Margarita;
León-Félix, Josefina;
Villicaña, Claudia

Publication type:

Article

Reporting Key Features in Cold-Adapted Bacteria.

Published in:

Life (2075-1729), 2018, v. 8, n. 1, p. 8, doi. 10.3390/life8010008

By:

Tribelli, Paula M.;
López, Nancy I.

Publication type:

Article

NMR and crystallographic structural studies of the Elongation factor P from Staphylococcus aureus.

Published in:

European Biophysics Journal, 2020, v. 49, n. 3/4, p. 223, doi. 10.1007/s00249-020-01428-x

By:

Golubev, Alexander;
Fatkhullin, Bulat;
Gabdulkhakov, Azat;
Bikmullin, Aydar;
Nurullina, Liliya;
Garaeva, Natalia;
Islamov, Daut;
Klochkova, Evelina;
Klochkov, Vladimir;
Aganov, Albert;
Khusainov, Iskander;
Validov, Shamil;
Yusupova, Gulnara;
Yusupov, Marat;
Usachev, Konstantin

Publication type:

Article

Enhanced surface colonisation and competition during bacterial adaptation to a fungus.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-48812-1

By:

Richter, Anne;
Blei, Felix;
Hu, Guohai;
Schwitalla, Jan W.;
Lozano-Andrade, Carlos N.;
Xie, Jiyu;
Jarmusch, Scott A.;
Wibowo, Mario;
Kjeldgaard, Bodil;
Surabhi, Surabhi;
Xu, Xinming;
Jautzus, Theresa;
Phippen, Christopher B. W.;
Tyc, Olaf;
Arentshorst, Mark;
Wang, Yue;
Garbeva, Paolina;
Larsen, Thomas Ostenfeld;
Ram, Arthur F. J.;
van den Hondel, Cees A. M.

Publication type:

Article

Implications of Bacterial Adaptation to Phenol Degradation under Suboptimal Culture Conditions Involving Stenotrophomonas maltophilia KB2 and Pseudomonas moorei KB4.

Published in:

Water (20734441), 2022, v. 14, n. 18, p. 2845, doi. 10.3390/w14182845

By:

Nowak, Agnieszka;
Wasilkowski, Daniel;
Mrozik, Agnieszka

Publication type:

Article

In Silico Functional Characterization of a Hypothetical Protein From Pasteurella Multocida Reveals a Novel S-Adenosylmethionine-Dependent Methyltransferase Activity.

Published in:

Bioinformatics & Biology Insights, 2023, v. 17, p. 1, doi. 10.1177/11779322231184024

By:

Ullah Masum, Md. Habib;
Rajia, Sultana;
Bristi, Uditi Paul;
Akter, Mir Salma;
Amin, Mohammad Ruhul;
Shishir, Tushar Ahmed;
Ferdous, Jannatul;
Ahmed, Firoz;
Rahaman, Md. Mizanur;
Saha, Otun

Publication type:

Article

Highlight: From Prey to Pathogen—The Role of Predation in Driving Virulence.

Published in:

Genome Biology & Evolution, 2024, v. 16, n. 8, p. 1, doi. 10.1093/gbe/evae170

By:

McGrath, Casey

Publication type:

Article

Bacterial Adaptation by a Transposition Burst of an Invading IS Element.

Published in:

Genome Biology & Evolution, 2021, v. 13, n. 11, p. 1, doi. 10.1093/gbe/evab245

By:

Miller, Scott R;
Abresch, Heidi E;
Ulrich, Nikea J;
Sano, Emiko B;
Demaree, Andrew H;
Oman, Andrew R;
Garber, Arkadiy I

Publication type:

Article

Within-Host Adaptation Mediated by Intergenic Evolution in Pseudomonas aeruginosa.

Published in:

Genome Biology & Evolution, 2019, v. 11, n. 5, p. 1385, doi. 10.1093/gbe/evz083

By:

Khademi, S M Hossein;
Sazinas, Pavelas;
Jelsbak, Lars

Publication type:

Article

Trajectories and Drivers of Genome Evolution in Surface-AssociatedMarine Phaeobacter.

Published in:

Genome Biology & Evolution, 2017, v. 9, n. 12, p. 3297, doi. 10.1093/gbe/evx249

By:

Freese, Heike M.;
Sikorski, Johannes;
Bunk, Boyke;
Scheuner, Carmen;
Meier-Kolthoff, Jan P.;
Spröer, Cathrin;
Gram, Lone;
Overmann, Jörg

Publication type:

Article

Long-Term Diversity and Genome Adaptation of Acinetobacter baylyi in a Minimal-Medium Chemostat.

Published in:

Genome Biology & Evolution, 2013, v. 5, n. 1, p. 87, doi. 10.1093/gbe/evs120

By:

Jezequel, Nadia;
Lagomarsino, Marco Cosentino;
Heslot, Francois;
Thomen, Philippe

Publication type:

Article

Purifying Selection and Molecular Adaptation in the Genome of Verminephrobacter, the Heritable Symbiotic Bacteria of Earthworms.

Published in:

Genome Biology & Evolution, 2012, v. 4, n. 3, p. 307, doi. 10.1093/gbe/evs014

By:

Kjeldsen, Kasper U.;
Bataillon, Thomas;
Pinel, Nicolás;
De Mita, Stéphane;
Lund, Marie B.;
Panitz, Frank;
Bendixen, Christian;
Stahl, David A.;
Schramm, Andreas

Publication type:

Article

Rosmarinus officinalis L. essential oil and the related compound 1,8-cineole do not induce direct or cross-protection in Listeria monocytogenes ATCC 7644 cultivated in meat broth.

Published in:

Canadian Journal of Microbiology, 2012, v. 58, n. 8, p. 973, doi. 10.1139/w2012-070

By:

Gomes Neto, Nelson Justino;
Luz, Isabelle Silva;
Honório, Wanessa Gonçalves;
Tavares, Adassa Gama;
de Souza, Evandro Leite

Publication type:

Article

Nutrition-adaptive control of multiple-bacteriocin production by Weissella hellenica QU 13.

Published in:

Journal of Applied Microbiology, 2016, v. 120, n. 1, p. 70, doi. 10.1111/jam.12997

By:

Masuda, Y.;
Perez, R.H.;
Zendo, T.;
Sonomoto, K.

Publication type:

Article