Works about BACTERIA phylogeny

Results: 457

Evidence for the presence of key chlorophyll-biosynthesis-related proteins in the genus Rubrobacter (Phylum Actinobacteria) and its implications for the evolution and origin of photosynthesis.

Published in:

Photosynthesis Research, 2016, v. 127, n. 2, p. 201, doi. 10.1007/s11120-015-0177-y

By:

Gupta, Radhey;
Khadka, Bijendra

Publication type:

Article

Screening of bacteria for self-healing of concrete cracks and optimization of the microbial calcium precipitation process.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 15, p. 6661, doi. 10.1007/s00253-016-7382-2

By:

Zhang, J.;
Wu, R.;
Li, Y.;
Zhong, J.;
Deng, X.;
Liu, B.;
Han, N.;
Xing, F.

Publication type:

Article

Burkholderia: an update on taxonomy and biotechnological potential as antibiotic producers.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 12, p. 5215, doi. 10.1007/s00253-016-7520-x

By:

Depoorter, Eliza;
Bull, Matt;
Peeters, Charlotte;
Coenye, Tom;
Vandamme, Peter;
Mahenthiralingam, Eshwar

Publication type:

Article

Comparative analysis of two 16S rRNA gene-based PCR primer sets provides insight into the diversity distribution patterns of anammox bacteria in different environments.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 19, p. 8163, doi. 10.1007/s00253-015-6814-8

By:

Wang, Shuailong;
Hong, Yiguo;
Wu, Jiapeng;
Xu, Xiang-Rong;
Bin, Liying;
Pan, Yueping;
Guan, Fengjie;
Wen, Jiali

Publication type:

Article

Functional gene-based discovery of phenazines from the actinobacteria associated with marine sponges in the South China Sea.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 14, p. 5939, doi. 10.1007/s00253-015-6547-8

By:

Karuppiah, Valliappan;
Li, Yingxin;
Sun, Wei;
Feng, Guofang;
Li, Zhiyong

Publication type:

Article

Occurrence and importance of anaerobic ammonium-oxidising bacteria in vegetable soils.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 13, p. 5709, doi. 10.1007/s00253-015-6454-z

By:

Shen, Li-dong;
Wu, Hong-sheng;
Gao, Zhi-qiu;
Xu, Xiang-hua;
Chen, Tie-xi;
Liu, Shuai;
Cheng, Hai-xiang

Publication type:

Article

Ribosomal protein biomarkers provide root nodule bacterial identification by MALDI-TOF MS.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 13, p. 5547, doi. 10.1007/s00253-015-6515-3

By:

Ziegler, Dominik;
Pothier, Joël;
Ardley, Julie;
Fossou, Romain;
Pflüger, Valentin;
Meyer, Sofie;
Vogel, Guido;
Tonolla, Mauro;
Howieson, John;
Reeve, Wayne;
Perret, Xavier

Publication type:

Article

RAW BOVINE MILK AS A RESERVOIR OF MULTI-DRUG RESISTANT, BETA-LACTAMASE-PRODUCING Klebsiella.

Published in:

Journal of Applied Life Sciences & Environment, 2024, v. 57, n. 1, p. 19, doi. 10.46909/alse-571122

By:

MAHANTI, Achintya;
JOARDAR, Siddhartha Narayan;
BANDYOPADHYAY, Samiran;
BANERJEE, Jaydeep;
GHOSH, Sarbaswarup;
DUTTA, Tapan Kumar;
SAMANTA, Indranil

Publication type:

Article

Distribution of the Lamellibrachia spp. (Siboglinidae, Annelida) and their trophosome endosymbiont phylotypes in the Mediterranean Sea.

Published in:

Marine Biology, 2014, v. 161, n. 6, p. 1229, doi. 10.1007/s00227-014-2413-y

By:

Rubin-Blum, Maxim;
Tsadok, Rami;
Shemesh, Eli;
Goodman-Tchernov, Beverly;
Austin, James;
Coleman, Dwight;
Ben-Avraham, Zvi;
Gruber, David;
Tchernov, Dan

Publication type:

Article

Multilocus and SSU rRNA gene phylogenetic analyses of available cyanobacterial genomes, and their relation to the current taxonomic system.

Published in:

Hydrobiologia, 2018, v. 811, n. 1, p. 19, doi. 10.1007/s10750-017-3373-2

By:

Mareš, Jan

Publication type:

Article

Multi-scale phylogenetic heterogeneity of archaea, bacteria, methanogens and methanotrophs in lake sediments.

Published in:

Hydrobiologia, 2015, v. 751, n. 1, p. 159, doi. 10.1007/s10750-015-2184-6

By:

Billard, Elodie;
Domaizon, Isabelle;
Tissot, Nathalie;
Arnaud, Fabien;
Lyautey, Emilie

Publication type:

Article

Taxonomy of cyanobacteria: a contribution to consensus approach.

Published in:

Hydrobiologia, 2014, v. 740, n. 1, p. 1, doi. 10.1007/s10750-014-1971-9

By:

Palinska, Katarzyna;
Surosz, Waldemar

Publication type:

Article

FAD/NADH Dependent Oxidoreductases: From Different Amino Acid Sequences to Similar Protein Shapes for Playing an Ancient Function.

Published in:

Journal of Clinical Medicine, 2019, v. 8, n. 12, p. 2117, doi. 10.3390/jcm8122117

By:

Trisolini, Lucia;
Gambacorta, Nicola;
Gorgoglione, Ruggiero;
Montaruli, Michele;
Laera, Luna;
Colella, Francesco;
Volpicella, Mariateresa;
De Grassi, Anna;
Pierri, Ciro Leonardo

Publication type:

Article

Revisiting the phylogeny of Wolbachia in Collembola.

Published in:

Ecology & Evolution (20457758), 2017, v. 7, n. 7, p. 2009, doi. 10.1002/ece3.2738

By:

Ma, Yao;
Chen, Wan ‐ Jun;
Li, Zhao ‐ Hui;
Zhang, Feng;
Gao, Yan;
Luan, Yun ‐ Xia

Publication type:

Article

Changes in bacterial community structure associated with phytoplankton succession in outdoor experimental ponds.

Published in:

Plankton & Benthos Research, 2015, v. 10, n. 1, p. 34, doi. 10.3800/pbr.10.34

By:

KOBAYASHI, YUKI;
YOSHIKUNI HODOKI;
KAKO OHBAYASHI;
NOBORU OKUDA;
SHIN-ICHI NAKANO

Publication type:

Article

Draft genome sequences of 'Candidatus Chloroploca asiatica' and 'Candidatus Viridilinea mediisalina', candidate representatives of the Chloroflexales order: phylogenetic and taxonomic implications.

Published in:

Standards in Genomic Sciences, 2018, v. 13, n. 1, p. N.PAG, doi. 10.1186/s40793-018-0329-8

By:

Grouzdev, Denis S.;
Rysina, Maria S.;
Bryantseva, Irina A.;
Gorlenko, Vladimir M.;
Gaisin, Vasil A.

Publication type:

Article

Complete genome sequence and wholegenome phylogeny of Kosmotoga pacifica type strain SLHLJ1<sup>T</sup> from an East Pacific hydrothermal sediment.

Published in:

Standards in Genomic Sciences, 2017, v. 12, p. 1, doi. 10.1186/s40793-016-0214-2

By:

Lijing Jiang;
L'Haridon, Stéphane;
Jebbar, Mohamed;
Hongxiu Xu;
Alain, Karine;
Zongze Shao

Publication type:

Article

Draft genomic sequence of Nereida ignava CECT 5292, a marine bacterium of the family Rhodobacteraceae.

Published in:

Standards in Genomic Sciences, 2016, v. 11, n. 1, p. 1, doi. 10.1186/s40793-016-0141-2

By:

Arahal, David;
Pujalte, María;
Rodrigo-Torres, Lidia

Publication type:

Article

Complete genome sequence of Staphylococcus aureus, strain ILRI_Eymole1/1, isolated from a Kenyan dromedary camel.

Published in:

Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0098-6

By:

Zubair, Saima;
Fischer, Anne;
Liljander, Anne;
Meens, Jochen;
Hegerman, Jan;
Gourlé, Hadrien;
Bishop, Richard;
Roebbelen, Ina;
Younan, Mario;
Mustafa, Mudassir;
Mushtaq, Mamoona;
Bongcam-Rudloff, Erik;
Jores, Joerg

Publication type:

Article

Draft genome of Myxosarcina sp. strain GI1, a baeocytous cyanobacterium associated with the marine sponge Terpios hoshinota.

Published in:

Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0011-3

By:

Chun-Hui Yu;
Chung-Kuang Lu;
Huang-Ming Su;
Tzen-Yuh Chiang;
Chi-Chuan Hwang;
Tsunglin Liu;
Yi-Min Chen

Publication type:

Article

High quality draft genome sequence of Brachymonas chironomi AIMA4T (DSM 19884<sup>T</sup>) isolated from a Chironomus sp. egg mass.

Published in:

Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s40793-015-0010-4

By:

Laviad, Sivan;
Lapidus, Alla;
Han, James;
Haynes, Matthew;
Reddy, T. B. K.;
Huntemann, Marcel;
Pati, Amrita;
Ivanova, Natalia N.;
Mavromatis, Konstantinos;
Lang, Elke;
Rohde, Manfred;
Markowitz, Victor;
Woyke, Tanja;
Klenk, Hans-Peter;
Kyrpides, Nikos C.;
Halpern, Malka

Publication type:

Article

Draft genome sequences for the obligate bacterial predators Bacteriovorax spp. of four phylogenetic clusters.

Published in:

Standards in Genomic Sciences, 2015, v. 10, n. 1, p. 1, doi. 10.1186/1944-3277-10-11

By:

Chen, Huan;
Brinkac, Lauren M.;
Mishra, Pamela;
Li, Nan;
Lymperopoulou, Despoina S.;
Dickerson, Tamar L.;
Gordon-Bradley, Nadine;
Williams, Henry N.;
Badger, Jonathan H.

Publication type:

Article

Genome sequence of Phaeobacter inhibens type strain (T5), a secondary metabolite producing representative of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens.

Published in:

Standards in Genomic Sciences, 2013, v. 9, n. 2, p. 334, doi. 10.4056/sigs.4448212

By:

Dogs, Marco;
Voget, Sonja;
Teshima, Hazuki;
Petersen, Jörn;
Davenport, Karen;
Dalingault, Hajnalka;
Chen, Amy;
Pati, Amrita;
Ivanova, Natalia;
Goodwin, Lynne;
Chain, Patrick;
Detter, John;
Standfest, Sonja;
Rohde, Manfred;
Gronow, Sabine;
Kyrpides, Nikos;
Woyke, Tanja;
Simon, Meinhard;
Klenk, Hans-Peter;
Göker, Markus

Publication type:

Article

Complete genome sequence of Desulfocapsa sulfexigens, a marine deltaproteobacterium specialized in disproportionating inorganic sulfur compounds.

Published in:

Standards in Genomic Sciences, 2013, v. 8, n. 1, p. 58, doi. 10.4056/sigs.3777412

By:

Finster, Kai;
Kjeldsen, Kasper;
Kube, Michael;
Reinhardt, Richard;
Mussmann, Marc;
Amann, Rudolf;
Schreiber, Lars

Publication type:

Article

PM 7/21 (2) <italic>Ralstonia solanacearum</italic>,<italic> R. pseudosolanacearum</italic> and <italic>R. syzygii</italic> (<italic>Ralstonia solanacearum</italic> species complex).

Published in:: EPPO Bulletin, 2018, v. 48, n. 1, p. 32, doi. 10.1111/epp.12454
Publication type:: Article

Recombination Is a Major Driving Force of Genetic Diversity in the Anaplasmataceae Ehrlichia ruminantium.

Published in:

Frontiers in Cellular & Infection Microbiology, 2016, v. 6, p. 1, doi. 10.3389/fcimb.2016.00111

By:

Nídia Cangi;
Gordon, Jonathan L.;
Bournez, Laure;
Pinarello, Valérie;
Aprelon, Rosalie;
Huber, Karine;
Lefrançois, Thierry;
Neves, Luís;
Meyer, Damien F.;
Vachiéry, Nathalie;
Xue-jie Yu;
Pearson, Talima;
Lopez, Job E.

Publication type:

Article

Probiotic potential of lactic acid bacteria strain LD/4.

Published in:

International Journal of Pharmacy & Life Sciences, 2013, v. 4, n. 10, p. 3000

By:

Gitika;
Tiwari, S. K.

Publication type:

Article

Diversity of Carbon Monoxide-Oxidizing Bacteria in Five Lakes on the Qinghai-Tibet Plateau, China.

Published in:

Geomicrobiology Journal, 2013, v. 30, n. 8, p. 758, doi. 10.1080/01490451.2013.769652

By:

Yang, Jian;
Jiang, Hongchen;
Dong, Hailiang;
Wu, Geng;
Hou, Weiguo;
Zhao, Wanyu;
Sun, Yongjuan;
Lai, Zhongping

Publication type:

Article

A polyphasic approach for the taxonomy of cyanobacteria: principles and applications.

Published in:

European Journal of Phycology, 2016, v. 51, n. 3, p. 346, doi. 10.1080/09670262.2016.1163738

By:

Komárek, Jiří

Publication type:

Article

The evolution of bacterial DNA base composition.

Published in:

Journal of Experimental Zoology Part B: Molecular & Developmental Evolution, 2014, v. 322, n. 7, p. 517, doi. 10.1002/jez.b.22565

By:

Agashe, Deepa;
Shankar, Nachiket

Publication type:

Article

Biogeography of planktonic bacterial communities across the whole Mediterranean Sea.

Published in:

Ocean Science, 2013, v. 9, n. 4, p. 585, doi. 10.5194/os-9-585-2013

By:

Mapelli, F.;
Varela, M. M.;
Barbato, M.;
Alvariño, R.;
Fusi, M.;
Álvarez, M.;
Merlino, G.;
Daffonchio, D.;
Borin, S.

Publication type:

Article

Phylogenetic placement of Symplocastrum (Phormidiaceae, Cyanophyceae) with a new combination S. californicum and two new species: S. flechtnerae and S. torsivum.

Published in:

Phycologia, 2014, v. 53, n. 6, p. 529, doi. 10.2216/14-029.1

By:

PIETRASIAK, NICOLE;
MÜHLSTEINOVÁ, RADKA;
SIEGESMUND, MARIA A.;
JOHANSEN, JEFFREY R.

Publication type:

Article

Polyphasic characterization of cyanobacteria isolated from desert crusts, and the description of Desertifilum tharense gen. et sp. nov. (Oscillatoriales).

Published in:

Phycologia, 2012, v. 51, n. 3, p. 260, doi. 10.2216/09-51.1

By:

Dadheech, Pawan K.;
Abed, Raeid M. M.;
Mahmoud, Huda;
Mohan, M. Krishna;
Krienitz, Lothar

Publication type:

Article

Identification and characterization of 2-keto-3-deoxy- l-rhamnonate dehydrogenase belonging to the MDR superfamily from the thermoacidophilic bacterium Sulfobacillus thermosulfidooxidans: implications to l-rhamnose metabolism in archaea.

Published in:

Extremophiles, 2015, v. 19, n. 2, p. 469, doi. 10.1007/s00792-015-0731-8

By:

Bae, Jungdon;
Kim, Suk;
Lee, Sun

Publication type:

Article

Preparation of poly(3-hydroxybutyrate-co-hydroxyvalerate) films from halophilic archaea and their potential use in drug delivery.

Published in:

Extremophiles, 2015, v. 19, n. 2, p. 515, doi. 10.1007/s00792-015-0735-4

By:

Danis, Ozkan;
Ogan, Ayse;
Tatlican, Pınar;
Attar, Azade;
Cakmakci, Emrah;
Mertoglu, Bulent;
Birbir, Meral

Publication type:

Article

Culturable diversity of aerobic halophilic archaea (Fam. Halobacteriaceae) from hypersaline, meromictic Transylvanian lakes.

Published in:

Extremophiles, 2015, v. 19, n. 2, p. 525, doi. 10.1007/s00792-015-0738-1

By:

Baricz, Andreea;
Cristea, Adorján;
Muntean, Vasile;
Teodosiu, Gabriela;
Andrei, Adrian-Ştefan;
Molnár, Imola;
Alexe, Mircea;
Rakosy-Tican, Elena;
Banciu, Horia

Publication type:

Article

Genome sequence of a novel deep-sea vent epsilonproteobacterial phage provides new insight into the co-evolution of Epsilonproteobacteria and their phages.

Published in:

Extremophiles, 2013, v. 17, n. 3, p. 405, doi. 10.1007/s00792-013-0529-5

By:

Yoshida-Takashima, Yukari;
Takaki, Yoshihiro;
Shimamura, Shigeru;
Nunoura, Takuro;
Takai, Ken

Publication type:

Article

Haloferax chudinovii sp. nov., a halophilic archaeon from Permian potassium salt deposits.

Published in:

Extremophiles, 2013, v. 17, n. 3, p. 499, doi. 10.1007/s00792-013-0534-8

By:

Saralov, Alexander;
Baslerov, Roman;
Kuznetsov, Boris

Publication type:

Article

Isolation and characterization of two novel alkalitolerant sulfidogens from a Thiopaq bioreactor, Desulfonatronum alkalitolerans sp. nov., and Sulfurospirillum alkalitolerans sp. nov.

Published in:

Extremophiles, 2013, v. 17, n. 3, p. 535, doi. 10.1007/s00792-013-0538-4

By:

Sorokin, D.;
Tourova, T.;
Muyzer, G.

Publication type:

Article

Complete genome sequence and phylogenetic position of the Bacillus cereus group phage JBP901.

Published in:

Archives of Virology, 2015, v. 160, n. 9, p. 2381, doi. 10.1007/s00705-015-2485-0

By:

Asare, Paul;
Ryu, Sangryeol;
Kim, Kwang-Pyo

Publication type:

Article

Characterization of a new phage, termed ϕA318, which is specific for Vibrio alginolyticus.

Published in:

Archives of Virology, 2012, v. 157, n. 5, p. 917, doi. 10.1007/s00705-012-1244-8

By:

Lin, Ying-Rong;
Chiu, Chi-Wen;
Chang, Feng-Yi;
Lin, Chan-Shing

Publication type:

Article

Characterization, phylogenetic distribution and evolutionary trajectories of diverse hydrocarbon degrading microorganisms isolated from refinery sludge.

Published in:

3 Biotech, 2018, v. 8, n. 6, p. 1, doi. 10.1007/s13205-018-1297-9

By:

Dasgupta, Debdeep;
Jasmine, Jublee;
Mukherji, Suparna

Publication type:

Article

Scrub Typhus Outbreak, Northern Thailand, 2006-2007.

Published in:

Emerging Infectious Diseases, 2013, v. 19, n. 5, p. 774, doi. 10.3201/eid1905.121445

By:

Rodkvamtook, Wuttikon;
Gaywee, Jariyanart;
Kanjanavanit, Suparat;
Ruangareerate, Toon;
Richards, Allen L.;
Sangjun, Noppadon;
Jeamwattanalert, Pimmada;
Sirisopana, Narongrid

Publication type:

Article

Diversity and Phylogenetic Analyses of Bacterial Symbionts in Three Whitefly Species from Southeast Europe.

Published in:

Insects (2075-4450), 2017, v. 8, n. 4, p. 113, doi. 10.3390/insects8040113

By:

Skaljac, Marisa;
Kanakala, Surapathrudu;
Zanic, Katja;
Puizina, Jasna;
Pleic, Ivana Lepen;
Ghanim, Murad

Publication type:

Article

An expanded phylogeny for the genus Phytophthora.

Published in:

IMA Fungus, 2017, v. 8, n. 2, p. 355, doi. 10.5598/imafungus.2017.08.02.09

By:

Xiao Yang;
Tyler, Brett M.;
Chuanxue Hong

Publication type:

Article

Enterohemorrhagic Escherichia coli O157 in milk and dairy products from Libya: Isolation and molecular identification by partial sequencing of 16S rDNA.

Published in:

Veterinary World, 2016, v. 9, n. 11, p. 1184, doi. 10.14202/vetworld.2016.1184-1189

By:

Garbaj, Aboubaker M.;
Awad, Enas M.;
Azwai, Salah M.;
Abolghait, Said K.;
Naas, Hesham T.;
Moawad, A.;
Gammoudi, Fatim T.;
Barbieri, Ilaria;
Eldaghayes, Ibrahim M.

Publication type:

Article

Phylogenetic background of E. coli isolated from asymptomatic pregnant women from Kolkata, India.

Published in:

Journal of Infection in Developing Countries, 2015, v. 9, n. 7, p. 720, doi. 10.3855/jidc.5771

By:

Mukherjee, Mandira;
Koley, Snehashis;
Mukherjee, SandipKumar;
Basu, Shreya;
Ghosh, Biplab;
Chakraborty, Somajita

Publication type:

Article

Low-virulence phylogenetic background of CTX-M-producing Escherichia coli isolated from extraintestinal infections.

Published in:

Journal of Infection in Developing Countries, 2013, v. 7, n. 10, p. 756, doi. 10.3855/jidc.3781

By:

Paiva, Andyara L.;
Lincopan, Nilton;
Silva, Ketrin C.;
Neves, Patrícia R.;
Moreno, Andrea M.;
McCulloch, John A.;
Astolfi-Ferreira, Claudete S.;
Ferreira, Antonio J. P.

Publication type:

Article

Multilocus sequence typing of 102 Burkholderia pseudomallei strains isolated from China.

Published in:

2016

By:

FANG, Y.;
ZHU, P.;
LI, Q.;
CHEN, H.;
LI, Y.;
REN, C.;
HU, Y.;
TAN, Z.;
GU, J.;
MAO, X.

Publication type:

journal article

Whole-genome analysis of diverse Chlamydia trachomatis strains identifies phylogenetic relationships masked by current clinical typing.

Published in:

Nature Genetics, 2012, v. 44, n. 4, p. 413, doi. 10.1038/ng.2214

By:

Harris, Simon R;
Clarke, Ian N;
Seth-Smith, Helena M B;
Solomon, Anthony W;
Cutcliffe, Lesley T;
Marsh, Peter;
Skilton, Rachel J;
Holland, Martin J;
Mabey, David;
Peeling, Rosanna W;
Lewis, David A;
Spratt, Brian G;
Unemo, Magnus;
Persson, Kenneth;
Bjartling, Carina;
Brunham, Robert;
de Vries, Henry J C;
Morré, Servaas A;
Speksnijder, Arjen;
Bébéar, Cécile M

Publication type:

Article