Works matching DE "BACTERIA classification"

Results: 931

Exploring bladder cancer through urinary microbiota: innovative "urinetypes" classification and establishment of a diagnostic model.

Published in:

Journal of Translational Medicine, 2025, v. 23, n. 1, p. 1, doi. 10.1186/s12967-025-06518-y

By:

Sheng, Zhaoyang;
Liu, Jing;
Wang, Maoyu;
Chen, Xiang;
Xu, Jinshan;
Zhang, Chen;
Xu, Yang;
Zhang, Hui;
Zhu, Jinpeng;
Qin, Nan;
Zeng, ShuXiong;
Zheng, Zhijun;
Zhang, ZhenSheng

Publication type:

Article

Zhengella sedimenti sp. nov. and Phycobacter sedimenti sp. nov., two novel bacteria isolated from coastal sediment with genomic and metabolic analysis.

Published in:

Antonie van Leeuwenhoek, 2025, v. 118, n. 9, p. 1, doi. 10.1007/s10482-025-02120-w

By:

Lin, Pei-Ran;
Deng, Li-Jia-Yu;
Zhang, Han-Zhe;
Liu, Le;
Liu, Tian-He;
Lu, De-Chen;
Du, Zong-Jun

Publication type:

Article

Insights into the bacterial fraction of sediments from the South China Sea: physiological, chemotaxonomic, and genomic characterization of seven novel members of the Bacillaceae family.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1553679

By:

Ge, Shu-Tong;
Cheng, Hong;
Zhong, Ying-Wen;
Tang, Jia-Ling;
Huang, Xin-Yue;
Wei, Bin;
Wu, Yue-Hong;
Wang, Chun-Sheng

Publication type:

Article

Bacterial chromatics: exploring pigments and their practical applications.

Published in:

Cuestiones de Fisioterapia, 2024, v. 53, n. 3, p. 5101

By:

ramyasri, U. Sita;
Naveena, k.;
Jyothi, ch.

Publication type:

Article

作物青枯病发生与生态防控研究进展.

Published in:

Ecological Science, 2025, v. 44, n. 2, p. 280, doi. 10.14108/j.cnki.1008-8873.2025.02.029

By:

张晨宁;
杜甜甜;
诸卫平;
梁小敏;
舒迎花;
王建武;
冯远娇

Publication type:

Article

Exploring the diversity and genomics of cultivable Bacillus -related endophytic bacteria from the medicinal plant Galium aparine L.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1612860

By:

Rutkowska, Natalia;
Daroch, Maurycy;
Marchut-Mikołajczyk, Olga

Publication type:

Article

Microbial genomic database of the Yangtze River, the third-longest river on Earth.

Published in:

Scientific Data, 2025, v. 12, n. 1, p. 1, doi. 10.1038/s41597-025-05548-x

By:

Ren, Minglei;
You, Bensheng;
Gong, Xue;
Zhang, Peixuan;
Wang, Jianjun

Publication type:

Article

Taxonomic Profile of Cultivable Microbiota from Adult Sheep Follicular Fluid and Its Effects on In Vitro Development of Prepubertal Lamb Oocytes.

Published in:

Animals (2076-2615), 2025, v. 15, n. 13, p. 1951, doi. 10.3390/ani15131951

By:

Mrenoshki, Slavcho;
Temerario, Letizia;
Mastrorocco, Antonella;
Visci, Grazia;
Notario, Elisabetta;
Marzano, Marinella;
Martino, Nicola Antonio;
Mrenoshki, Daniela;
Lacalandra, Giovanni Michele;
Pesole, Graziano;
Dell'Aquila, Maria Elena

Publication type:

Article

Donor Human Milk Bacterial Microbiota Composition is Shaped by Breastfeeding Mode.

Published in:

Journal of Human Lactation, 2025, v. 41, n. 3, p. 359, doi. 10.1177/08903344251343033

By:

Wang, Xufei;
Pan, Xiaoyu;
Xiao, Fangfei;
Xu, Qiao;
Li, Xiaolu;
Ye, Lin;
Li, Dan;
Zhang, Ting;
Wang, Yizhong

Publication type:

Article

Applying machine learning to classify table olives using bacterial metataxonomic data.

Published in:

NPJ Science of Food, 2025, v. 9, n. 1, p. 1, doi. 10.1038/s41538-025-00496-7

By:

López-García, Elio;
Benítez-Cabello, Antonio;
Arroyo-López, Francisco Noé

Publication type:

Article

Bacterial genera in the fluids from apical periodontitis‐related radicular cysts: An observational study.

Published in:

International Endodontic Journal, 2025, v. 58, n. 6, p. 902, doi. 10.1111/iej.14220

By:

Szaraz, David;
Bohm, Jan;
Cerulova, Sabina;
Bodokyova, Lenka;
Danek, Zdenek;
Machacek, Ctirad;
Borilova Linhartova, Petra

Publication type:

Article

Vision transformer based bacteria classification model for Gram-stained direct smear images.

Published in:

Multimedia Tools & Applications, 2025, v. 84, n. 19, p. 20289, doi. 10.1007/s11042-025-20742-0

By:

V, Shwetha;
Prasad, Keerthana;
Mukhopadhyay, Chiranjay;
Banerjee, Barnini

Publication type:

Article

Microbiome: Bacterial imbalance in Crohn's disease.

Published in:

Nature Reviews Microbiology, 2014, v. 12, n. 5, p. 312, doi. 10.1038/nrmicro3255

By:

Hofer, Ursula

Publication type:

Article

And the winner should be...

Published in:: 2011
Publication type:: Editorial

Biased gene transfer in microbial evolution.

Published in:

Nature Reviews Microbiology, 2011, v. 9, n. 7, p. 543, doi. 10.1038/nrmicro2593

By:

Andam, Cheryl P.;
Gogarten, J. Peter

Publication type:

Article

The ecological coherence of high bacterial taxonomic ranks.

Published in:

Nature Reviews Microbiology, 2010, v. 8, n. 7, p. 523, doi. 10.1038/nrmicro2367

By:

Philippot, Laurent;
Andersson, Siv G. E.;
Battin, Tom J.;
Prosser, James I.;
Schimel, Joshua P.;
Whitman, William B.;
Hallin, Sara

Publication type:

Article

Vertical distribution and characterization of aerobic phototrophic bacteria at the Juan de Fuca Ridge in the Pacific Ocean.

Published in:

Photosynthesis Research, 2008, v. 97, n. 3, p. 235

By:

Christopher Rathgeber;
Michael Lince;
Jean Alric;
Andrew Lang;
Elaine Humphrey;
Robert Blankenship;
André Verméglio;
F. Plumley;
Cindy Van Dover;
J. Beatty;
Vladimir Yurkov

Publication type:

Article

Analysis of the bacterial biodiversity of peaches under refrigerated storage after treatment by high hydrostatic pressure.

Published in:

Food & Bioproducts Processing: Transactions of the Institution of Chemical Engineers Part C, 2017, v. 102, p. 55, doi. 10.1016/j.fbp.2016.12.003

By:

Burgos, Maria José Grande;
Aguayo, Mari Carmen López;
Pulido, Rubén Pérez;
Gálvez, Antonio;
Lucas, Rosario

Publication type:

Article

Genomics approach to the analysis of bacterial communities dynamics in Hirschsprung's disease-associated enterocolitis: a pilot study.

Published in:

2010

By:

De Filippo, C.;
Pini-Prato, A.;
Mattioli, G.;
Avanzini, S.;
Rapuzzi, G.;
Cavalieri, D.;
Di Paola, M.;
Stefanini, I.;
Ceccherini, I.;
Mavilio, D.;
Lionetti, P.;
Jasonni, V.

Publication type:

journal article

Treatment strategy when using intraoperative peritoneal lavage for perforated appendicitis in children: a preliminary report.

Published in:

2004

By:

Ohno, Yasuharu;
Furui, Junichiro;
Kanematsu, Takashi

Publication type:

journal article

Obesity and the gastrointestinal microbiota: a review of associations and mechanisms.

Published in:

Nutrition Reviews, 2015, v. 73, n. 6, p. 376, doi. 10.1093/nutrit/nuv004

By:

Graham, Catherine;
Mullen, Anne;
Whelan, Kevin

Publication type:

Article

Pneumonia-Plus: a deep learning model for the classification of bacterial, fungal, and viral pneumonia based on CT tomography.

Published in:

European Radiology, 2023, v. 33, n. 12, p. 8869, doi. 10.1007/s00330-023-09833-4

By:

Wang, Fang;
Li, Xiaoming;
Wen, Ru;
Luo, Hu;
Liu, Dong;
Qi, Shuai;
Jing, Yang;
Wang, Peng;
Deng, Gang;
Huang, Cong;
Du, Tingting;
Wang, Limei;
Liang, Hongqin;
Wang, Jian;
Liu, Chen

Publication type:

Article

Burkholderia: an update on taxonomy and biotechnological potential as antibiotic producers.

Published in:

Applied Microbiology & Biotechnology, 2016, v. 100, n. 12, p. 5215, doi. 10.1007/s00253-016-7520-x

By:

Depoorter, Eliza;
Bull, Matt;
Peeters, Charlotte;
Coenye, Tom;
Vandamme, Peter;
Mahenthiralingam, Eshwar

Publication type:

Article

Design of N-acyl homoserine lactonase with high substrate specificity by a rational approach.

Published in:

Applied Microbiology & Biotechnology, 2015, v. 99, n. 11, p. 4735, doi. 10.1007/s00253-014-6304-4

By:

Kyeong, Hyun-Ho;
Kim, Jin-Hyun;
Kim, Hak-Sung

Publication type:

Article

Helicobacter pylori infection in Africa: comprehensive insight into its pathogenesis, management, and future perspectives.

Published in:

Umm Al-Qura University Journal of Applied Sciences (Springer Nature), 2025, v. 11, n. 2, p. 378, doi. 10.1007/s43994-024-00166-6

By:

Emmanuel, Blessing N.;
Peter, Deborah A.;
Peter, Mercy O.;
Adedayo, Ibrahim S.;
Olaifa, Kayode

Publication type:

Article

Growth and grazing rates of bacteria groups with different apparent DNA content in the Gulf of Mexico.

Published in:

Marine Biology, 2004, v. 145, n. 6, p. 1213, doi. 10.1007/s00227-004-1406-7

By:

Jochem, F.;
Lavrentyev, P.;
First, M.

Publication type:

Article

Evaluation of bacterial contents, package labelling and antimicrobial activity of some commercial probiotic products available in local market.

Published in:

Journal of Research in Pharmacy, 2022, v. 26, n. 3, p. 502, doi. 10.29228/jrp.147

By:

HASHIM, Zahraa Amer

Publication type:

Article

Methylophilaceae and Hyphomicrobium as target taxonomic groups in monitoring the function of methanol-fed denitrification biofilters in municipal wastewater treatment plants.

Published in:

Journal of Industrial Microbiology & Biotechnology, 2017, v. 44, n. 1, p. 35, doi. 10.1007/s10295-016-1860-5

By:

Rissanen, Antti;
Ojala, Anne;
Fred, Tommi;
Toivonen, Jyrki;
Tiirola, Marja

Publication type:

Article

Genome-guided discovery of diverse natural products from Burkholderia sp.

Published in:

Journal of Industrial Microbiology & Biotechnology, 2014, v. 41, n. 2, p. 275, doi. 10.1007/s10295-013-1376-1

By:

Liu, Xiangyang;
Cheng, Yi-Qiang

Publication type:

Article

Genome mining of Streptomyces ambofaciens.

Published in:

Journal of Industrial Microbiology & Biotechnology, 2014, v. 41, n. 2, p. 251, doi. 10.1007/s10295-013-1379-y

By:

Aigle, Bertrand;
Lautru, Sylvie;
Spiteller, Dieter;
Dickschat, Jeroen;
Challis, Gregory;
Leblond, Pierre;
Pernodet, Jean-Luc

Publication type:

Article

菌药协同防治马铃薯疮痂病后蛭石基质微生物菌群的变化.

Published in:

Journal of Henan Agricultural Sciences, 2022, v. 51, n. 1, p. 89, doi. 10.15933/j.cnki.1004‑3268.2022.01.011

By:

吴晓颖;
杨方岩;
李寿如;
贾景丽;
于秀梅;
刘大群;
赵伟全

Publication type:

Article

Multilocus and SSU rRNA gene phylogenetic analyses of available cyanobacterial genomes, and their relation to the current taxonomic system.

Published in:

Hydrobiologia, 2018, v. 811, n. 1, p. 19, doi. 10.1007/s10750-017-3373-2

By:

Mareš, Jan

Publication type:

Article

Review of the cyanobacterial genera implying planktic species after recent taxonomic revisions according to polyphasic methods: state as of 2014.

Published in:

Hydrobiologia, 2016, v. 764, n. 1, p. 259, doi. 10.1007/s10750-015-2242-0

By:

Komárek, Jiří

Publication type:

Article

Taxonomic and phylogenetic evaluation of Limnothrix strains (Oscillatoriales, Cyanobacteria) by adding Limnothrix planktonica strains isolated from central China.

Published in:

Hydrobiologia, 2012, v. 698, n. 1, p. 367, doi. 10.1007/s10750-012-1127-8

By:

Zhu, Mengling;
Yu, Gongliang;
Li, Xiaochuang;
Tan, Wenhua;
Li, Renhui

Publication type:

Article

Microbial diversity in the Bassin d’Arcachon coastal lagoon (SW France).

Published in:

Hydrobiologia, 2008, v. 611, n. 1, p. 5, doi. 10.1007/s10750-008-9461-6

By:

Wit, Rutger

Publication type:

Article

Fluorescent Machine Learning Aided Classification of Pathogenic Bacteria Using the Excitation Emission Matrix.

Published in:

Analytical Letters, 2025, v. 58, n. 1, p. 136, doi. 10.1080/00032719.2024.2319645

By:

Sundaramoorthy, Anandh;
Thoufeeq, Jamal Mohamed;
Ganesan, Bharanidharan;
Prakasarao, Aruna;
Ganesan, Singaravelu

Publication type:

Article

An Initial Inventory of Bacteria Found within the Soils and Waters of Great Smoky Mountains National Park.

Published in:

Southeastern Naturalist, 2007, v. 6, n. 1, p. 57, doi. 10.1656/1528-7092(2007)6[57:AIIOBF]2.0.CO;2

By:

O'Connell, Seán P.;
York, Emily A.;
Collins, Melissa B.;
Rosbach, Derren T.;
Black, Kristina Reid;
Haney, Weaver B.

Publication type:

Article

Small-Scale Depthwise Separable Convolutional Neural Networks for Bacteria Classification.

Published in:

Electronics (2079-9292), 2021, v. 10, n. 23, p. 3005, doi. 10.3390/electronics10233005

By:

Mai, Duc-Tho;
Ishibashi, Koichiro

Publication type:

Article

Microbiota is a primary cause of pathogenesis of chronic wounds.

Published in:

Journal of Wound Care, 2016, v. 25, p. S33, doi. 10.12968/jowc.2016.25.Sup10.S33

By:

Wolcott, R.;
Sanford, N.;
Gabrilska, R.;
Oates, J. L.;
Wilkinson, J. E.;
Rumbaugh, K. P.

Publication type:

Article

Surgical site infection in elderly patients with hip fractures, silver-coated versus regular dressings: a randomised prospective trial.

Published in:

Journal of Wound Care, 2015, v. 24, n. 10, p. 441, doi. 10.12968/jowc.2015.24.10.441

By:

Kadar, A.;
Eisenberg, G.;
Yahav, E.

Publication type:

Article

169 Cyanobacteria, Taxonomy and Aquatic Odour: Within- and Among-Species Differences Re-Examined.

Published in:

Journal of Phycology, 2003, v. 39, p. 58, doi. 10.1111/j.0022-3646.2003.03906001_169.x

By:

Watson, S.B.;
Kling, H.;
Izaguirre, G.

Publication type:

Article

18 Morphology, 16s rRNA gene sequences, and internally transcribed (ITS) regions: towards a meaningful systematic framework for the cyanobacteria.

Published in:

Journal of Phycology, 2003, v. 39, p. 7, doi. 10.1111/j.0022-3646.2003.03906001_18.x

By:

Casamatta, D. A.;
Johansen, J. R.

Publication type:

Article

Draft genome sequences of 'Candidatus Chloroploca asiatica' and 'Candidatus Viridilinea mediisalina', candidate representatives of the Chloroflexales order: phylogenetic and taxonomic implications.

Published in:

Standards in Genomic Sciences, 2018, v. 13, n. 1, p. N.PAG, doi. 10.1186/s40793-018-0329-8

By:

Grouzdev, Denis S.;
Rysina, Maria S.;
Bryantseva, Irina A.;
Gorlenko, Vladimir M.;
Gaisin, Vasil A.

Publication type:

Article

Strategies for high-altitude adaptation revealed from high-quality draft genome of non-violacein producing <italic>Janthinobacterium lividum</italic> ERGS5:01.

Published in:

Standards in Genomic Sciences, 2018, v. 13, n. 1, p. N.PAG, doi. 10.1186/s40793-018-0313-3

By:

Kumar, Rakshak;
Acharya, Vishal;
Singh, Dharam;
Kumar, Sanjay

Publication type:

Article

Complete genome sequence of Jiangella gansuensis strain YIM 002<sup>T</sup> (DSM 44835<sup>T</sup>), the type species of the genus Jiangella and source of new antibiotic compounds.

Published in:

Standards in Genomic Sciences, 2017, v. 12, p. 1, doi. 10.1186/s40793-017-0226-6

By:

Jian-Yu Jiao;
Carro, Lorena;
Lan Liu;
Xiao-Yang Gao;
Xiao-Tong Zhang;
Hozzein, Wael N.;
Lapidus, Alla;
Huntemann, Marcel;
Reddy, T. B. K.;
Varghese, Neha;
Hadjithomas, Michalis;
Ivanova, Natalia N.;
Göker, Markus;
Pillay, Manoj;
Eisen, Jonathan A.;
Woyke, Tanja;
Klenk, Hans-Peter;
Kyrpides, Nikos C.;
Wen-Jun Li

Publication type:

Article

High-quality-draft genome sequence of the yellow-pigmented flavobacterium Joostella marina type strain (En5).

Published in:

Standards in Genomic Sciences, 2013, v. 8, n. 1, p. 37, doi. 10.4056/sigs.3537045

By:

Stackebrandt, Erko;
Chertkov, Olga;
Lapidus, Alla;
Nolan, Matt;
Lucas, Susan;
Han, Cliff;
Cheng, Jan-Fang;
Tapia, Roxanne;
Goodwin, Lynne;
Bruce, David;
Pitluck, Sam;
Liolios, Konstantinos;
Mavromatis, Konstantinos;
Pagani, Ioanna;
Ivanova, Natalia;
Mikhailova, Natalia;
Huntemann, Marcel;
Pati, Amrita;
Chen, Amy;
Palaniappan, Krishna

Publication type:

Article

Genome sequence and description of Aeromicrobium massiliense sp. nov.

Published in:

Standards in Genomic Sciences, 2012, v. 7, n. 2, p. 246, doi. 10.4056/sigs.3306717

By:

Ramasamy, Dhamodharan;
Kokcha, Sahare;
Lagier, Jean-Christophe;
Nguyen, Thi-Thien;
Raoult, Didier;
Fournier, Pierre-Edouard

Publication type:

Article

Non-contiguous finished genome sequence and description of Brevibacterium senegalense sp. nov.

Published in:

Standards in Genomic Sciences, 2012, v. 7, n. 2, p. 233, doi. 10.4056/sigs.3256677

By:

Kokcha, Sahare;
Ramasamy, Dhamodharan;
Lagier, Jean-Christophe;
Robert, Catherine;
Raoult, Didier;
Fournier, Pierre-Edouard

Publication type:

Article

Origin Sample Prediction and Spatial Modeling of Antimicrobial Resistance in Metagenomic Sequencing Data.

Published in:

Frontiers in Genetics, 2021, v. 11, p. N.PAG, doi. 10.3389/fgene.2021.642991

By:

Zhelyazkova, Maya;
Yordanova, Roumyana;
Mihaylov, Iliyan;
Kirov, Stefan;
Tsonev, Stefan;
Danko, David;
Vassilev, Dimitar

Publication type:

Article

Standardized molecular typing.

Published in:

Mycoses, 1999, v. 42, p. 69

By:

Müller, F.-M. C.;
Lischewski, A.;
Harmsen, D.;
Hacker, J.

Publication type:

Article