Works matching DE "ARABIDOPSIS"

Results: 5000

Transcriptomics and trans-organellar complementation reveal limited signaling of 12-cis-oxo-phytodienoic acid during early wound response in Arabidopsis.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-61832-9

By:

Mekkaoui, Khansa;
Baral, Ranjit;
Smith, Fiona;
Klein, Moritz;
Feussner, Ivo;
Hause, Bettina

Publication type:

Article

Old player, new roles: defining the role of the plastidial phosphorylase.

Published in:

2025

By:

Seung, David;
Orzechowski, Slawomir;
Fettke, Joerg

Publication type:

Abstract

Arabidopsis PRMT5 buffers pre‐mRNA splicing and development against genetic variation in donor splice sites.

Published in:

New Phytologist, 2025, v. 247, n. 4, p. 1727, doi. 10.1111/nph.70293

By:

Beckel, Maximiliano S.;
San Martín, Abril;
Sánchez, Sabrina E.;
Seymour, Danelle K.;
de Leone, María José;
Careno, Daniel A.;
Mora‐García, Santiago;
Weigel, Detlef;
Yanovsky, Marcelo J.;
Chernomoretz, Ariel

Publication type:

Article

Degradation of AtSRC2 by SKP1/BTB/POZ domain effectors in Heterodera schachtii inhibits RBOHF via ROS and enhances infection.

Published in:

New Phytologist, 2025, v. 247, n. 4, p. 1855, doi. 10.1111/nph.70281

By:

Yao, Ke;
Zhang, Xin;
Jian, Jinzhuo;
Ning, Yuese;
Zhang, Chunhui;
Zheng, Jingwu;
Wu, Duqing;
Kong, Lingan;
Huang, Wenkun;
Liu, Shiming;
Peng, Deliang;
Peng, Huan

Publication type:

Article

The PHYTOCHROME INTERACTING FACTOR 3, a bHLH transcription factor, promotes thermosensory growth by directly activating PIF4 transcription and its protein accumulation in Arabidopsis.

Published in:

New Phytologist, 2025, v. 247, n. 4, p. 1742, doi. 10.1111/nph.70278

By:

Das, Sreya;
Modak, Annayasa;
Rajkumar, Mohan Singh;
Garhwal, Vikas;
Sethi, Vishmita;
Jain, Mukesh;
Gangappa, Sreeramaiah N.

Publication type:

Article

A comprehensive atlas of full-length Arabidopsis eccDNA populations identifies their genomic origins and epigenetic regulation.

Published in:

PLoS Biology, 2025, v. 23, n. 7, p. 1, doi. 10.1371/journal.pbio.3003275

By:

Zaidi, Syed Shan-e-Ali;
Shakir, Sara;
De Kort, Hanne;
Mehta, Devang;
Nguyen, Vu;
Gutzat, Ruben;
Vanderschuren, Hervé

Publication type:

Article

Disruption of ABI4 Enhances Anthocyanin Accumulation in Arabidopsis Seedlings Through HY5-Mediated Light Signaling.

Published in:

Plants (2223-7747), 2025, v. 14, n. 13, p. 1905, doi. 10.3390/plants14131905

By:

Zeng, Mingyang;
Wu, Yan;
Lin, Shunfa;
Zhang, Fang;
Jiang, Haiyan;
Ma, Lixia;
Liu, Dong

Publication type:

Article

Cytokinin depends on GA biosynthesis and signaling to regulate different aspects of vegetative phase change in Arabidopsis.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-61507-5

By:

Werner, Sören;
Tarkowskà, Danuše;
Schmülling, Thomas

Publication type:

Article

Correction: SUPPRESOR OF GAMMA RESPONSE 1 promotes early onset of endoreplication upon DNA double-strand breaks by inducing CCS52A1 expression in Arabidopsis roots.

Published in:

2025

By:

Wada, Toshiki;
Sakamoto, Ayako N.;
Umeda, Masaaki;
Takahashi, Naoki

Publication type:

Correction Notice

Abscisic acid enhances non-photochemical quenching through SnRK2 and ABI3 in Physcomitrium patens.

Published in:

Journal of Plant Research, 2025, v. 138, n. 4, p. 625, doi. 10.1007/s10265-025-01627-7

By:

Maeng, Chang-Hyun;
Fujita, Takuya;
Kishimoto, Junko;
Tanaka, Ryouichi;
Takabayashi, Atsushi;
Fujita, Tomomichi

Publication type:

Article

Shikimate Kinase-Like 1 Participates in an Ancient and Conserved Role Contributing to Chloroplast Biogenesis in Land Plants Open Access.

Published in:

Molecular Biology & Evolution, 2025, v. 42, n. 6, p. 1, doi. 10.1093/molbev/msaf129

By:

Kanaris, Michael;
Lee, Jonathan;
Chang, Belinda;
Christendat, Dinesh

Publication type:

Article

Beware of Sealing Film of Petri Dishes!—Alters the Expression of a Large Number of Genes.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 12, p. 5484, doi. 10.3390/ijms26125484

By:

Ma, Yun;
Li, Fang;
Wang, Xuyang;
Sun, Qingpeng;
Wang, Ronghuan;
Zhao, Jiuran

Publication type:

Article

PROTEIN TARGETING TO STARCH Is Required for Localising GRANULE-BOUND STARCH SYNTHASE to Starch Granules and for Normal Amylose Synthesis in Arabidopsis.

Published in:

PLoS Biology, 2015, v. 13, n. 2, p. 1, doi. 10.1371/journal.pbio.1002080

By:

Seung, David;
Soyk, Sebastian;
Coiro, Mario;
Maier, Benjamin A.;
Eicke, Simona;
Zeeman, Samuel C.

Publication type:

Article

Correction: A SCARECROW-RETINOBLASTOMA Protein Network Controls Protective Quiescence in the Arabidopsis Root Stem Cell Organizer.

Published in:: 2014
Publication type:: Correction Notice

Crossover Localisation Is Regulated by the Neddylation Posttranslational Regulatory Pathway.

Published in:

PLoS Biology, 2014, v. 12, n. 8, p. 1, doi. 10.1371/journal.pbio.1001930

By:

Jahns, Marina Tagliaro;
Vezon, Daniel;
Chambon, Aurélie;
Pereira, Lucie;
Falque, Matthieu;
Martin, Olivier C.;
Chelysheva, Liudmila;
Grelon, Mathilde

Publication type:

Article

Correction: A Downy Mildew Effector Attenuates Salicylic Acid–Triggered Immunity in Arabidopsis by Interacting with the Host Mediator Complex.

Published in:: 2014
Publication type:: Correction Notice

The Bacterial Effector HopX1 Targets JAZ Transcriptional Repressors to Activate Jasmonate Signaling and Promote Infection in <i>Arabidopsis</i>.

Published in:

PLoS Biology, 2014, v. 12, n. 2, p. 1, doi. 10.1371/journal.pbio.1001792

By:

Gimenez-Ibanez, Selena;
Boter, Marta;
Fernández-Barbero, Gemma;
Chini, Andrea;
Rathjen, John P.;
Solano, Roberto

Publication type:

Article

A Downy Mildew Effector Attenuates Salicylic Acid–Triggered Immunity in Arabidopsis by Interacting with the Host Mediator Complex.

Published in:

PLoS Biology, 2013, v. 11, n. 12, p. 1, doi. 10.1371/journal.pbio.1001732

By:

Caillaud, Marie-Cécile;
Asai, Shuta;
Rallapalli, Ghanasyam;
Piquerez, Sophie;
Fabro, Georgina;
Jones, Jonathan D. G.

Publication type:

Article

A SCARECROW-RETINOBLASTOMA Protein Network Controls Protective Quiescence in the Arabidopsis Root Stem Cell Organizer.

Published in:

PLoS Biology, 2013, v. 11, n. 11, p. 1, doi. 10.1371/journal.pbio.1001724

By:

Cruz-Ramírez, Alfredo;
Díaz-Triviño, Sara;
Wachsman, Guy;
Du, Yujuan;
Arteága-Vázquez, Mario;
Zhang, Hongtao;
Benjamins, Rene;
Blilou, Ikram;
Neef, Anne B.;
Chandler, Vicki;
Scheres, Ben

Publication type:

Article

Deacetylation Ensures Timely Regulation of Flowering.

Published in:

PLoS Biology, 2013, v. 11, n. 9, p. 1, doi. 10.1371/journal.pbio.1001646

By:

Coombs, Amy

Publication type:

Article

JAGGED Controls Arabidopsis Petal Growth and Shape by Interacting with a Divergent Polarity Field.

Published in:

PLoS Biology, 2013, v. 11, n. 4, p. 1, doi. 10.1371/journal.pbio.1001550

By:

Sauret-Güeto, Susanna;
Schiessl, Katharina;
Bangham, Andrew;
Sablowski, Robert;
Coen, Enrico

Publication type:

Article

Flower Petals Take Shape.

Published in:

PLoS Biology, 2013, v. 11, n. 4, p. 1, doi. 10.1371/journal.pbio.1001548

By:

Savage, Liz

Publication type:

Article

Abscisic Acid-Independent Oxylipin Pathway Controls Stomatal Closure and Immune Defense in Arabidopsis.

Published in:

PLoS Biology, 2013, v. 11, n. 3, p. 1, doi. 10.1371/journal.pbio.1001513

By:

Montillet, Jean-Luc;
Leonhardt, Nathalie;
Mondy, Samuel;
Tranchimand, Sylvain;
Rumeau, Dominique;
Boudsocq, Marie;
Garcia, Ana Victoria;
Douki, Thierry;
Bigeard, Jean;
Laurie` re, Christiane;
Chevalier, Anne;
Castresana, Carmen;
Hirt, Heribert

Publication type:

Article

FTIP1 Is an Essential Regulator Required for Florigen Transport.

Published in:

PLoS Biology, 2012, v. 10, n. 4, p. 1, doi. 10.1371/journal.pbio.1001313

By:

Lu Liu;
Chang Liu;
Xingliang Hou;
Wanyan Xi;
Lisha Shen;
Zhen Tao;
Yue Wang;
Hao Yu

Publication type:

Article

Gene Gain and Loss during Evolution of Obligate Parasitism in the White Rust Pathogen of Arabidopsis thaliana.

Published in:

PLoS Biology, 2011, v. 9, n. 7, p. 1, doi. 10.1371/journal.pbio.1001094

By:

Kemen, Eric;
Gardiner, Anastasia;
Schultz-Larsen, Torsten;
Kemen, Ariane C.;
Balmuth, Alexi L.;
Robert-Seilaniantz, Alexandre;
Bailey, Kate;
Holub, Eric;
Studholme, David J.;
MacLean, Dan;
Jones, Jonathan D. G.

Publication type:

Article

Following Tetraploidy in Maize, a Short Deletion Mechanism Removed Genes Preferentially from One of the Two Homeologs.

Published in:

PLoS Biology, 2010, v. 8, n. 6, p. 1, doi. 10.1371/journal.pbio.1000409

By:

Woodhouse, Margaret R.;
Schnable, James C.;
Pedersen, Brent S.;
Lyons, Eric;
Lisch, Damon;
Subramaniam, Shabarinath;
Freeling, Michael

Publication type:

Article

AGAMOUS Controls GIANT KILLER, a Multifunctional Chromatin Modifier in Reproductive Organ Patterning and Differentiation.

Published in:

PLoS Biology, 2009, v. 7, n. 11, p. 1, doi. 10.1371/journal.pbio.1000251

By:

Kian-Hong Ng;
Hao Yu;
Ito, Toshiro

Publication type:

Article

RIN4 Functions with Plasma Membrane H<sup>+</sup>-ATPases to Regulate Stomatal Apertures during Pathogen Attack.

Published in:

PLoS Biology, 2009, v. 7, n. 6, p. 1, doi. 10.1371/journal.pbio.1000139

By:

Jun Liu;
Elmore, James M.;
Fuglsang, Anja T.;
Palmgren, Michael G.;
Staskawicz, Brian J.;
Coaker, Gitta

Publication type:

Article

Target Genes of the MADS Transcription Factor SEPALLATA3: Integration of Developmental and Hormonal Pathways in the Arabidopsis Flower.

Published in:

PLoS Biology, 2009, v. 7, n. 4, p. 0854, doi. 10.1371/journal.pbio.1000090

By:

Kaufmann, Kerstin;
Muiño, Jose M.;
Jauregui, Ruy;
Airoldi, Chiara A.;
Smaczniak, Cezary;
Krajewski, Pawel;
Angenent, Gerco C.

Publication type:

Article

Network Hubs Buffer Environmental Variation in Saccharomyces cerevisiae.

Published in:

PLoS Biology, 2008, v. 6, n. 11, p. e264, doi. 10.1371/journal.pbio.0060264

By:

Levy, Sasha F.;
Siegal, Mark L.

Publication type:

Article

A Mutual Support Mechanism through Intercellular Movement of CAPRICE and GLABRA3 Can Pattern the Arabidopsis Root Epidermis.

Published in:

PLoS Biology, 2008, v. 6, n. 9, p. e235, doi. 10.1371/journal.pbio.0060235

By:

Savage, Natasha Saint;
Walker, Tom;
Wieckowski, Yana;
Schiefelbein, John;
Dolan52, Liam;
Monk, Nicholas A. M

Publication type:

Article

Retinoblastoma and Its Binding Partner MSI1 Control Imprinting in Arabidopsis.

Published in:

PLoS Biology, 2008, v. 6, n. 8, p. e194, doi. 10.1371/journal.pbio.0060194

By:

Jullien, Pauline E.;
Mosquna, Assaf;
Ingouff, Mathieu;
Sakata, Tadashi;
Ohad, Nir;
Berger, Frédéric

Publication type:

Article

Two-Dimensional Patterning by a Trapping/Depletion Mechanism: The Role of TTG1 and GL3 in Arabidopsis Trichome Formation.

Published in:

PLoS Biology, 2008, v. 6, n. 6, p. e141, doi. 10.1371/journal.pbio.0060141

By:

Bouyer, Daniel;
Geier, Florian;
Kragler, Friedrich;
Schnittger, Arp;
Pesch, Martina;
Wester, Katja;
Balkunde, Rachappa;
Timmer, Jens;
Fleck, Christian;
Hlskamp, Martin

Publication type:

Article

The Circadian Clock Regulates Auxin Signaling and Responses in Arabidopsis.

Published in:

PLoS Biology, 2007, v. 5, n. 8, p. 1773, doi. 10.1371/journal.pbio.0050222

By:

Covington, Michael F.;
Harmer, Stacey L.

Publication type:

Article

Correction: Whole-Genome Analysis of the SHORT-ROOT Developmental Pathway in Arabidopsis.

Published in:

2006

By:

Levesque, Mitchell P.;
Vernoux, Teva;
Busch, Wolfgang;
Cui, Hongchang;
Wang, Jean Y.;
Blilou, Ikram;
Hassan, Hala;
Nakajima, Keiji;
Matsumoto, Noritaka;
Lohmann, Jan U.;
Scheres, Ben;
Benfey, Philip N.

Publication type:

Correction Notice

A New Test Detects Selection for Early Flowering in a Much-Studied Weed.

Published in:

PLoS Biology, 2006, v. 4, n. 5, p. e171, doi. 10.1371/journal.pbio.0040171

By:

Gross, Liza

Publication type:

Article

Structure of the Mg-Chelatase Cofactor GUN4 Reveals a Novel Hand-Shaped Fold for Porphyrin Binding.

Published in:

PLoS Biology, 2005, v. 3, n. 5, p. 777, doi. 10.1371/journal.pbio.0030151

By:

Verdecia, Mark A.;
Larkin, Robert M.;
Ferrer, Jean-Luc;
Riek, Roland;
Chory, Joanne;
Noel, Joseph P.

Publication type:

Article

Sorghum Genome Sequencing by Methylation Filtration.

Published in:

PLoS Biology, 2005, v. 3, n. 1, p. 103, doi. 10.1371/journal.pbio.0030013

By:

Bedell, Joseph A.;
Budiman, Muhammad A.;
Nunberg, Andrew;
Citek, Robert W.;
Robbins, Dan;
Jones, Joshua;
Flick, Elizabeth;
Rohlfing, Theresa;
Fries, Jason;
Bradford, Kourtney;
McMenamy, Jennifer;
Smith, Michael;
Holeman, Heather;
Roe, Bruce A.;
Wiley, Graham;
Korf, Ian F.;
Rabinowicz, Pablo D.;
Lakey, Nathan;
McCombie, W. Richard;
Jeddeloh, Jeffrey A.

Publication type:

Article

Interdependency of Brassinosteroid and Auxin Signaling in Arabidopsis.

Published in:

PLoS Biology, 2004, v. 2, n. 8, p. 1, doi. 10.1371/journal.pbio.0020258

By:

Nemhauser, Jennifer L;
Mockler, Todd C;
Chory, Joanne

Publication type:

Article

Channelling Evolution.

Published in:

PLoS Biology, 2004, v. 2, n. 1, p. 0022, doi. 10.1371/journal.pbio.0020019

By:

Niven, Jeremy E.

Publication type:

Article

Distinct Mechanisms Determine Transposon Inheritance and Methylation via Small Interfering RNA and Histone Modification.

Published in:

PLoS Biology, 2003, v. 1, n. 3, p. 420, doi. 10.1371/journal.pbio.0000067

By:

Lippman, Zachary;
May, Bruce;
Yordan, Cristy;
Singer, Tatjana;
Martienssen, Rob

Publication type:

Article

Characterization of thylakoid division using chloroplast dividing mutants in Arabidopsis.

Published in:

Photosynthesis Research, 2023, v. 157, n. 1, p. 1, doi. 10.1007/s11120-023-01002-4

By:

Ho, Jonathan;
Kwan, Warren;
Li, Vivian;
Theg, Steven M.

Publication type:

Article

LCIB functions as a carbonic anhydrase: evidence from yeast and Arabidopsis carbonic anhydrase knockout mutants.

Published in:

Photosynthesis Research, 2023, v. 156, n. 2, p. 193, doi. 10.1007/s11120-023-01005-1

By:

Kasili, Remmy W.;
Rai, Ashwani K.;
Moroney, James V.

Publication type:

Article

Removal of redox-sensitive Rubisco Activase does not alter Rubisco regulation in soybean.

Published in:

Photosynthesis Research, 2022, v. 154, n. 2, p. 169, doi. 10.1007/s11120-022-00962-3

By:

Harvey, Christopher M.;
Cavanagh, Amanda P.;
Kim, Sang Yeol;
Wright, David A.;
Edquilang, Ron G.;
Shreeves, Kayla S.;
Perdomo, Juan Alejandro;
Spalding, Martin H.;
Ort, Donald R.;
Bernacchi, Carl J.;
Huber, Steven C.

Publication type:

Article

Spruce versus Arabidopsis: different strategies of photosynthetic acclimation to light intensity change.

Published in:

Photosynthesis Research, 2022, v. 154, n. 1, p. 21, doi. 10.1007/s11120-022-00949-0

By:

Štroch, Michal;
Karlický, Václav;
Ilík, Petr;
Ilíková, Iva;
Opatíková, Monika;
Nosek, Lukáš;
Pospíšil, Pavel;
Svrčková, Marika;
Rác, Marek;
Roudnický, Pavel;
Zdráhal, Zbyněk;
Špunda, Vladimír;
Kouřil, Roman

Publication type:

Article

Effects of MPK3 and MPK6 kinases on the chloroplast architecture and function induced by cold acclimation in Arabidopsis.

Published in:

Photosynthesis Research, 2021, v. 149, n. 1/2, p. 201, doi. 10.1007/s11120-021-00852-0

By:

Saucedo-García, Mariana;
González-Córdova, Carla D.;
Ponce-Pineda, I. Giordano;
Cano-Ramírez, Dora;
Romero-Colín, Fernanda M.;
Arroyo-Pérez, Erik E.;
King-Díaz, Beatriz;
Zavafer, Alonso;
Gavilanes-Ruíz, Marina

Publication type:

Article

Opposite domination of cyclic and pseudocyclic electron flows in short-illuminated dark-adapted leaves of angiosperms and gymnosperms.

Published in:

Photosynthesis Research, 2017, v. 134, n. 2, p. 149, doi. 10.1007/s11120-017-0419-2

By:

Noridomi, Mari;
Nakamura, Shouta;
Tsuyama, Michito;
Futamura, Norihiro;
Vladkova, Radka

Publication type:

Article

The absence of chlorophyll b affects lateral mobility of photosynthetic complexes and lipids in grana membranes of Arabidopsis and barley chlorina mutants.

Published in:

Photosynthesis Research, 2017, v. 133, n. 1-3, p. 357, doi. 10.1007/s11120-017-0376-9

By:

Tyutereva, Elena;
Evkaikina, Anastasiia;
Ivanova, Alexandra;
Voitsekhovskaja, Olga

Publication type:

Article

Global transcriptome analyses provide evidence that chloroplast redox state contributes to intracellular as well as long-distance signalling in response to stress and acclimation in Arabidopsis.

Published in:

Photosynthesis Research, 2016, v. 128, n. 3, p. 287, doi. 10.1007/s11120-016-0245-y

By:

Bode, Rainer;
Ivanov, Alexander;
Hüner, Norman

Publication type:

Article

Photoprotective capacity of non-photochemical quenching in plants acclimated to different light intensities.

Published in:

Photosynthesis Research, 2015, v. 126, n. 2/3, p. 261, doi. 10.1007/s11120-015-0102-4

By:

Ware, Maxwell;
Belgio, Erica;
Ruban, Alexander

Publication type:

Article