Works matching Classification of microorganisms

Results: 333

A survey for the applications of content-based microscopic image analysis in microorganism classification domains.

Published in:

Artificial Intelligence Review, 2019, v. 51, n. 4, p. 577, doi. 10.1007/s10462-017-9572-4

By:

Li, Chen;
Wang, Kai;
Xu, Ning

Publication type:

Article

Towards the unification of sequence-based classification and sequence-based identification of host-associated microorganisms.

Published in:

New Phytologist, 2015, v. 205, n. 1, p. 27, doi. 10.1111/nph.13180

By:

Herr, Joshua R.;
Öpik, Maarja;
Hibbett, David S.

Publication type:

Article

Functional Basis of Microorganism Classification.

Published in:

PLoS Computational Biology, 2015, v. 11, n. 8, p. 1, doi. 10.1371/journal.pcbi.1004472

By:

Zhu, Chengsheng;
Delmont, Tom O.;
Vogel, Timothy M.;
Bromberg, Yana

Publication type:

Article

Study on the classification and identification of microorganisms in municipal sludge.

Published in:

Applied Nanoscience, 2023, v. 13, n. 3, p. 2115, doi. 10.1007/s13204-021-02078-x

By:

Zhang, Kegui;
Zhang, Xiaomei;
Yang, Qianqian

Publication type:

Article

Oral_voting_transfer: classification of oral microorganisms' function proteins with voting transfer model.

Published in:

Frontiers in Microbiology, 2024, p. 1, doi. 10.3389/fmicb.2023.1277121

By:

Wenzheng Bao;
Yujun Liu;
Baitong Chen

Publication type:

Article

A Comparative Study of Deep Learning Classification Methods on a Small Environmental Microorganism Image Dataset (EMDS-6): From Convolutional Neural Networks to Visual Transformers.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.792166

By:

Zhao, Peng;
Li, Chen;
Rahaman, Md Mamunur;
Xu, Hao;
Yang, Hechen;
Sun, Hongzan;
Jiang, Tao;
Grzegorzek, Marcin

Publication type:

Article

Microbial enrichment and gene functional categories revealed on the walls of a spent fuel pool of a nuclear power plant.

Published in:

PLoS ONE, 2018, v. 13, n. 10, p. 1, doi. 10.1371/journal.pone.0205228

By:

Silva, Rosane;
Almeida, Darcy Muniz de;
Cabral, Bianca Catarina Azeredo;
Dias, Victor Hugo Giordano;
Mello, Isadora Cristina de Toledo e;
Ürményi, Turán Péter;
Woerner, August E.;
Neto, Rodrigo Soares de Moura;
Budowle, Bruce;
Nassar, Cristina Aparecida Gomes

Publication type:

Article

La taxonomie bactérienne moderne : revue des techniques — application à la caractérisation des bactéries nodulant les légumineuses (BNL).

Published in:

Canadian Journal of Microbiology, 2006, v. 52, n. 3, p. 169, doi. 10.1139/w05-092

By:

Zakhia, Frédéric;
de Lajudie, Philippe

Publication type:

Article

Environmental microorganism classification using optimized deep learning model.

Published in:

Environmental Science & Pollution Research, 2021, v. 28, n. 24, p. 31920, doi. 10.1007/s11356-021-13010-9

By:

Liang, Chih-Ming;
Lai, Chun-Chi;
Wang, Szu-Hong;
Lin, Yu-Hao

Publication type:

Article

A CLASSIFICATION OF MARINE MICROORGANISMS BY NUMERICAL TAXONOMY.

Published in:

Quality & Quantity, 1968, v. 2, n. 1/2, p. 162

By:

Möller, Frank;
Peroni, Corrado

Publication type:

Article

A novel hybrid transformer-CNN architecture for environmental microorganism classification.

Published in:

PLoS ONE, 2022, v. 17, n. 11, p. 1, doi. 10.1371/journal.pone.0277557

By:

Shao, Ran;
Bi, Xiao-Jun;
Chen, Zheng

Publication type:

Article

Bacterial and Archaeal Communities in Bleached Mottles of Tropical Podzols.

Published in:

Microbial Ecology, 2015, v. 69, n. 2, p. 372, doi. 10.1007/s00248-014-0493-3

By:

Silva, K.;
Vidal-Torrado, P.;
Lambais, M.

Publication type:

Article

Technological performances of commercial yeast strains ( Saccharomyces cerevisiae ) in different complex dough formulations.

Published in:

European Food Research & Technology, 2007, v. 226, n. 1/2, p. 19, doi. 10.1007/s00217-006-0503-x

By:

Manuela Rollini;
Ernestina Casiraghi;
Maria Pagani;
Matilde Manzoni

Publication type:

Article

Diversity and distribution of planktonic protists in the northern South China Sea.

Published in:

Journal of Plankton Research, 2011, v. 33, n. 3, p. 445

By:

Li, Lu-Yan;
Lin, Duan;
Chen, Jia-Hui;
Wu, Shu-Hui;
Huang, Qiao-Juan;
Zhou, Hui;
Qu, Liang-Hu;
Chen, Yue-Qin

Publication type:

Article

Mixture models for analysis of the taxonomic composition of metagenomes.

Published in:

Bioinformatics, 2011, v. 27, n. 12, p. 1618, doi. 10.1093/bioinformatics/btr266

By:

Meinicke, Peter;
Aßhauer, Kathrin Petra;
Lingner, Thomas

Publication type:

Article

Metagenomics: Shaping the gut microbiome.

Published in:

Nature Reviews Genetics, 2015, v. 16, n. 1, p. 2, doi. 10.1038/nrg3869

By:

Koch, Linda

Publication type:

Article

Risk Classification of Zoonotic Microorganisms.

Published in:

Applied Biosafety: Journal of the American Biological Safety Association, 2018, v. 23, n. 4, p. 199, doi. 10.1177/1535676018799094

By:

Baldo, Aline;
Welby, Sarah;
Thi, Chuong Daï Do;
Leunda, Amaya;
Herman, Philippe;
Breyer, Didier

Publication type:

Article

Genetic classification of Cryptosporidium isolates from humans and calves in Slovenia.

Published in:

Parasitology, 2008, v. 135, n. 11, p. 1263, doi. 10.1017/S0031182008004800

By:

SOBA, B.;
LOGAR, J.

Publication type:

Article

Phylogenetic analysis of Trypanosoma vivax supports the separation of South American/West African from East African isolates and a new T. vivax-like genotype infecting a nyala antelope from Mozambique.

Published in:

Parasitology, 2008, v. 135, n. 11, p. 1317, doi. 10.1017/S0031182008004848

By:

RODRIGUES, A. C.;
NEVES, L.;
GARCIA, H. A.;
VIOLA, L. B.;
MARCILI, A.;
DA SILVA, F. MAIA;
SIGAUQUE, I.;
BATISTA, J. S.;
PAIVA, F.;
TEIXEIRA, M. M. G.

Publication type:

Article

A DNA sequence-based study of the Schistosoma indicum (Trematoda: Digenea) group: population phylogeny, taxonomy and historical biogeography.

Published in:

Parasitology, 2007, v. 134, n. 14, p. 2009, doi. 10.1017/S0031182007003411

By:

ATTWOOD, S. W.;
FATIH, F. A.;
MONDAL, M. M. H.;
ALIM, M. A.;
FADJAR, S.;
RAJAPAKSE, R. P. V. J.;
ROLLINSON, D.

Publication type:

Article

159 Incertae Sedis No More: The Phylogenetic Affinity of Helicosporidia.

Published in:

Journal of Phycology, 2003, v. 39, p. 55, doi. 10.1111/j.0022-3646.2003.03906001_159.x

By:

Tartar, A.;
Boucias, D. G.

Publication type:

Article

15 Phylogeny of the chlorophyta: inferences from 18S and 26S rDNA.

Published in:

Journal of Phycology, 2003, v. 39, p. 6, doi. 10.1111/j.0022-3646.2003.03906001_15.x

By:

Buchheim, M. A.;
Buchheim, J. A.

Publication type:

Article

95 Development of macroalgal (seaweed) taxonomic keys utilizing digital & media technology.

Published in:

Journal of Phycology, 2003, v. 39, p. 33, doi. 10.1111/j.0022-3646.2003.03906001_95.x

By:

Lehman, R. L.;
Albert, E. M.

Publication type:

Article

EMDS-6: Environmental Microorganism Image Dataset Sixth Version for Image Denoising, Segmentation, Feature Extraction, Classification, and Detection Method Evaluation.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.829027

By:

Zhao, Peng;
Li, Chen;
Rahaman, Md Mamunur;
Xu, Hao;
Ma, Pingli;
Yang, Hechen;
Sun, Hongzan;
Jiang, Tao;
Xu, Ning;
Grzegorzek, Marcin

Publication type:

Article

Burn injury alters the intestinal microbiome’s taxonomic composition and functional gene expression.

Published in:

PLoS ONE, 2018, v. 13, n. 10, p. 1, doi. 10.1371/journal.pone.0205307

By:

Beckmann, Nadine;
Pugh, Amanda M.;
Caldwell, Charles C.

Publication type:

Article

Automatic identification of optimal marker genes for phenotypic and taxonomic groups of microorganisms.

Published in:

PLoS ONE, 2018, v. 13, n. 5, p. 1, doi. 10.1371/journal.pone.0195537

By:

Segev, Elad;
Pasternak, Zohar;
Ben Sasson, Tom;
Jurkevitch, Edouard;
Gonen, Mira

Publication type:

Article

Identification of subannual patterns in microbial community signatures from individual sedimentary laminae using a freeze-coring approach.

Published in:

Limnology & Oceanography, 2016, v. 61, n. 2, p. 735, doi. 10.1002/lno.10250

By:

Harrison, B. K.;
Myrbo, A.;
Flood, B. E.;
Bailey, J. V.

Publication type:

Article

FTIR spectroscopic discrimination of Saccharomyces cerevisiae and Saccharomyces bayanus strains.

Published in:

Canadian Journal of Microbiology, 2010, v. 56, n. 9, p. 793, doi. 10.1139/W10-062

By:

Adt, Isabelle;
Kohler, Achim;
Gognies, Sabine;
Budin, Julien;
Sandt, Christophe;
Belarbi, Abdelkader;
Manfait, Michel;
Sockalingum, Ganesh D.

Publication type:

Article

Pulsed-light system as a novel food decontamination technology: a review.

Published in:

Canadian Journal of Microbiology, 2007, v. 53, n. 7, p. 813, doi. 10.1139/W07-042

By:

Guillou, S.;
Leroi, F.;
Orange, N.;
Bakhrouf, A.;
Federighi, M.;
Elmnasser, N.

Publication type:

Article

Effect of soil composition, temperature, indigenous microflora, and environmental conditions on the survival of Escherichia coli O157:H7.

Published in:

Canadian Journal of Microbiology, 2007, v. 53, n. 7, p. 822, doi. 10.1139/W07-041

By:

Vidovic, Sinisa;
Block, Hushton C.;
Korber, Darren R.

Publication type:

Article

Characterization of isolates of Listeria monocytogenes from sludge using pulsed-field gel electrophoresis and virulence assays.

Published in:

Journal of Applied Microbiology, 2010, v. 108, n. 4, p. 1380, doi. 10.1111/j.1365-2672.2009.04531.x

By:

Kerouanton, A.;
Roche, S.M.;
Marault, M.;
Velge, P.;
Pourcher, A.-M.;
Brisabois, A.;
Federighi, M.;
Garrec, N.

Publication type:

Article

Multilocus Sequence Typing as a Replacement for Serotyping in Salmonella enterica.

Published in:

PLoS Pathogens, 2012, v. 8, n. 6, p. 1, doi. 10.1371/journal.ppat.1002776

By:

Achtman, Mark;
Wain, John;
Weill, François.-Xavier;
Nair, Satheesh;
Zhemin Zhou;
Sangal, Vartul;
Krauland, Mary G.;
Hale, James L.;
Harbottle, Heather;
Uesbeck, Alexandra;
Dougan, Gordon;
Harrison, Lee H.;
Brisse, Sylvain

Publication type:

Article

Enhancing the relevance of fungal taxonomy to plant pathology: phylogenetics, molecular diagnostics, and long-term memory.

Published in:

Canadian Journal of Plant Pathology, 2006, v. 28, p. S280, doi. 10.1080/07060660609507385

By:

Seifert, Keith A.

Publication type:

Article

THE OCCURRENCE OF FUSARIUM SPECIES IN CANADA.

Published in:

Canadian Journal of Plant Pathology, 2006, v. 28, p. S111

By:

Gordon, W. L.

Publication type:

Article

Ferroplasma cupricumulans sp. nov., a novel moderately thermophilic, acidophilic archaeon isolated from an industrial-scale chalcocite bioleach heap.

Published in:

Extremophiles, 2006, v. 10, n. 6, p. 525, doi. 10.1007/s00792-006-0527-y

By:

Hawkes, Rebecca B.;
Franzmann, Peter D.;
O'Hara, Graham;
Plumb, Jason J.

Publication type:

Article

Introduction to the SAVE study (2011-15): Streptococcus pneumoniae serotyping and antimicrobial susceptibility: Assessment for Vaccine Efficacy in Canada after the introduction of PCV-13.

Published in:

2018

By:

Zhanel, George G.;
Adam, Heather J.

Publication type:

research

Natural pigments derived from plants and microorganisms: classification, biosynthesis, and applications.

Published in:

Plant Biotechnology Journal, 2025, v. 23, n. 2, p. 592, doi. 10.1111/pbi.14522

By:

Tang, Qian;
Li, Zhibo;
Chen, Ningxin;
Luo, Xiaozhou;
Zhao, Qiao

Publication type:

Article

Chronic Otomycosis Due to Malassezia Spp.

Published in:

Journal of Global Infectious Diseases, 2010, v. 2, n. 2, p. 189, doi. 10.4103/0974-777X.62875

By:

Latha, R.;
Sasikala, R.;
Muruganandam, N.

Publication type:

Article

A Comprehensive Protocol for Improving the Description of Saprolegniales (Oomycota): Two Practical Examples (Saprolegnia aenigmatica sp. nov. and Saprolegnia racemosa sp. nov.).

Published in:

PLoS ONE, 2015, v. 10, n. 7, p. 1, doi. 10.1371/journal.pone.0132999

By:

Sandoval-Sierra, Jose Vladimir;
Diéguez-Uribeondo, Javier

Publication type:

Article

Partitioning the Relative Importance of Phylogeny and Environmental Conditions on Phytoplankton Fatty Acids.

Published in:

PLoS ONE, 2015, v. 10, n. 6, p. 1, doi. 10.1371/journal.pone.0130053

By:

Galloway, Aaron W. E.;
Winder, Monika

Publication type:

Article

Bioinformatic Amplicon Read Processing Strategies Strongly Affect Eukaryotic Diversity and the Taxonomic Composition of Communities.

Published in:

PLoS ONE, 2015, v. 10, n. 6, p. 1, doi. 10.1371/journal.pone.0130035

By:

Majaneva, Markus;
Hyytiäinen, Kirsi;
Varvio, Sirkka Liisa;
Nagai, Satoshi;
Blomster, Jaanika

Publication type:

Article

Clinical Implications of Species Identification in Monomicrobial Aeromonas Bacteremia.

Published in:

PLoS ONE, 2015, v. 10, n. 2, p. 1, doi. 10.1371/journal.pone.0117821

By:

Wu, Chi-Jung;
Chen, Po-Lin;
Hsueh, Po-Ren;
Chang, Ming-Chung;
Tsai, Pei-Jane;
Shih, Hsin-I;
Wang, Hsuan-Chen;
Chou, Pei-Hsin;
Ko, Wen-Chien

Publication type:

Article

The Discovery of phiAGATE, A Novel Phage Infecting Bacillus pumilus, Leads to New Insights into the Phylogeny of the Subfamily Spounavirinae.

Published in:

PLoS ONE, 2014, v. 9, n. 1, p. 1, doi. 10.1371/journal.pone.0086632

By:

Barylski, Jakub;
Nowicki, Grzegorz;
Goździcka-Józefiak, Anna

Publication type:

Article

Did Terrestrial Diversification of Amoebas (Amoebozoa) Occur in Synchrony with Land Plants?

Published in:

PLoS ONE, 2013, v. 8, n. 9, p. 1, doi. 10.1371/journal.pone.0074374

By:

Fiz-Palacios, Omar;
Romeralo, Maria;
Ahmadzadeh, Afsaneh;
Weststrand, Stina;
Ahlberg, Per Erik;
Baldauf, Sandra

Publication type:

Article

Full Genome Sequencing of Corriparta Virus, Identifies California Mosquito Pool Virus as a Member of the Corriparta virus Species.

Published in:

PLoS ONE, 2013, v. 8, n. 8, p. 1, doi. 10.1371/journal.pone.0070779

By:

Belaganahalli, Manjunatha N.;
Maan, Sushila;
Maan, Narender S.;
Nomikou, Kyriaki;
Guimera, Marc;
Brownlie, Joe;
Tesh, Robert;
Attoui, Houssam;
Mertens, Peter P. C.

Publication type:

Article

The Effects of Tertiary and Quaternary Infections on the Epidemiology of Dengue.

Published in:

PLoS ONE, 2010, v. 5, n. 8, p. 1, doi. 10.1371/journal.pone.0012347

By:

Wikramaratna, Paul S.;
Simmons, Cameron P.;
Gupta, Sunetra;
Recker, Mario

Publication type:

Article

Realtime PCR Is More Sensitive than Multiplex PCR for Diagnosis and Serotyping in Children with Culture Negative Pneumococcal Invasive Disease.

Published in:

2010

By:

Azzari, Chiara;
Moriondo, Maria;
Indolfi, Giuseppe;
Cortimiglia, Martina;
Canessa, Clementina;
Becciolini, Laura;
Lippi, Francesca;
de Martino, Maurizio;
Resti, Massimo

Publication type:

Case Study

Emergence of Respiratory Streptococcus agalactiae Isolates in Cystic Fibrosis Patients.

Published in:

PLoS ONE, 2009, v. 4, n. 2, p. 1, doi. 10.1371/journal.pone.0004650

By:

Eickel, Vera;
Kahl, Barbara;
Reinisch, Beatrice;
Dübbers, Angelika;
Küster, Peter;
Brandt, Claudia;
Spellerberg, Barbara

Publication type:

Article

Research into biological air treatment.

Published in:

Ekologija, 2007, v. 53, n. 3, p. 84

By:

Baltrėnas, Pranas;
Zagorskis, Alvydas

Publication type:

Article

Influence of biofilter's temperature regimes on air cleaning.

Published in:

Ekologija, 2007, v. 53, n. 3, p. 80

By:

Vaiškūnaitė, Rasa;
Baltrėnas, Pranas

Publication type:

Article