Works matching Chromatin

Results: 5000

Tilling the chromatin landscape: emerging methods for the discovery and profiling of protein–DNA interactions.

Published in:

Biochemistry & Cell Biology, 2005, v. 83, n. 4, p. 525, doi. 10.1139/O05-055

By:

Rodriguez, Benjamin A. T.;
Huang, Tim H.-M.

Publication type:

Article

Interplay among ATP-Dependent Chromatin Remodelers Determines Chromatin Organisation in Yeast.

Published in:

Biology (2079-7737), 2020, v. 9, n. 8, p. 190, doi. 10.3390/biology9080190

By:

Prajapati, Hemant K.;
Ocampo, Josefina;
Clark, David J.

Publication type:

Article

Extended chromatin fibers and chromatin organization.

Published in:

Biotechnic & Histochemistry, 2011, v. 86, n. 4, p. 213, doi. 10.3109/10520290903549022

By:

Mello, MLS;
Moraes, AS;
Vidal, BC

Publication type:

Article

Abiotic stress-mediated modulation of the chromatin landscape in Arabidopsis thaliana.

Published in:

Journal of Experimental Botany, 2020, v. 71, n. 17, p. 5280, doi. 10.1093/jxb/eraa286

By:

Raxwal, Vivek Kumar;
Ghosh, Sourav;
Singh, Somya;
Katiyar-Agarwal, Surekha;
Goel, Shailendra;
Jagannath, Arun;
Kumar, Amar;
Scaria, Vinod;
Agarwal, Manu

Publication type:

Article

The Dynamic Behavior of Chromatin in Response to DNA Double-Strand Breaks.

Published in:

Genes, 2022, v. 13, n. 2, p. 215, doi. 10.3390/genes13020215

By:

García Fernández, Fabiola;
Fabre, Emmanuelle

Publication type:

Article

Distinct features of lamin A-interacting chromatin domains mapped by ChIP-sequencing from sonicated or micrococcal nuclease-digested chromatin.

Published in:

Nucleus (1949-1034), 2015, v. 6, n. 1, p. 30, doi. 10.4161/19491034.2014.990855

By:

Lund, Eivind G;
Duband-Goulet, Isabelle;
Oldenburg, Anja;
Buendia, Brigitte;
Collas, Philippe

Publication type:

Article

ORGANIZATION OF HIGHER-LEVEL CHROMATIN STRUCTURES (CHROMOMERE, CHROMONEMA AND CHROMATIN BLOCK) EXAMINED USING VISIBLE LIGHT-INDUCED CHROMATIN PHOTO-STABILIZATION

Published in:

Cell Biology International, 2002, v. 26, n. 7, p. 579, doi. 10.1006/cbir.2002.0879

By:

Sheval, E. V.;
Prusov, A. N.;
Kireev, I. I.;
Fais, D.;
Polyakov, V. Yu.

Publication type:

Article

Transcription-coupled recruitment of human CHD1 and CHD2 influences chromatin accessibility and histone H3 and H3.3 occupancy at active chromatin regions.

Published in:

Epigenetics & Chromatin, 2015, v. 8, n. 1, p. 1, doi. 10.1186/1756-8935-8-4

By:

Siggens, Lee;
Cordeddu, Lina;
Rönnerblad, Michelle;
Lennartsson, Andreas;
Ekwall, Karl

Publication type:

Article

Redox-Dependent Chromatin Remodeling: A New Function of Nitric Oxide as Architect of Chromatin Structure in Plants.

Published in:

Frontiers in Plant Science, 2019, p. N.PAG, doi. 10.3389/fpls.2019.00625

By:

Ageeva-Kieferle, Alexandra;
Rudolf, Eva Esther;
Lindermayr, Christian

Publication type:

Article

A low-input high resolution sequential chromatin immunoprecipitation method captures genome-wide dynamics of bivalent chromatin.

Published in:

Epigenetics & Chromatin, 2024, v. 17, n. 1, p. 1, doi. 10.1186/s13072-024-00527-9

By:

Seneviratne, Janith A.;
Ho, William W. H.;
Glancy, Eleanor;
Eckersley-Maslin, Melanie A.

Publication type:

Article

Chromatin Remodeling Factors Isw2 and Ino80 Regulate Checkpoint Activity and Chromatin Structure in S Phase.

Published in:

Genetics, 2015, v. 199, n. 4, p. 1077, doi. 10.1534/genetics.115.174730

By:

Lee, Laura;
Rodriguez, Jairo;
Toshio Tsukiyama

Publication type:

Article

Structural studies of chromatin remodeling factors.

Published in:

Molecular Biology, 2016, v. 50, n. 6, p. 812, doi. 10.1134/S0026893316060212

By:

Volokh, O.;
Derkacheva, N.;
Studitsky, V.;
Sokolova, O.

Publication type:

Article

InferLoop: leveraging single-cell chromatin accessibility for the signal of chromatin loop.

Published in:

Briefings in Bioinformatics, 2023, v. 24, n. 3, p. 1, doi. 10.1093/bib/bbad166

By:

Zhang, Feng;
Jiao, Huiyuan;
Wang, Yihao;
Yang, Chen;
Li, Linying;
Wang, Zhiming;
Tong, Ran;
Zhou, Junmei;
Shen, Jianfeng;
Li, Lingjie

Publication type:

Article

Short‐range regulatory chromatin loops in plants.

Published in:

New Phytologist, 2020, v. 228, n. 2, p. 466, doi. 10.1111/nph.16632

By:

Gagliardi, Delfina;
Manavella, Pablo A.

Publication type:

Article

Chromatin Remodelers in the 3D Nuclear Compartment.

Published in:

Frontiers in Genetics, 2020, v. 11, p. N.PAG, doi. 10.3389/fgene.2020.600615

By:

Magaña-Acosta, Mauro;
Valadez-Graham, Viviana

Publication type:

Article

Activating the abscission checkpoint: Top2α senses chromatin bridges in cytokinesis: Top2α binds to DNA knots on chromatin bridges to activate the abscission checkpoint in human cells.

Published in:

BioEssays, 2024, v. 46, n. 5, p. 1, doi. 10.1002/bies.202400011

By:

Petsalaki, Eleni;
Zachos, George

Publication type:

Article

Establishing nucleosome architecture and stability at promoters: Roles of pioneer transcription factors and the RSC chromatin remodeler.

Published in:

BioEssays, 2017, v. 39, n. 5, p. n/a, doi. 10.1002/bies.201600237

By:

Kubik, Slawomir;
Bruzzone, Maria Jessica;
Shore, David

Publication type:

Article

In vitro chromatin remodelling by chromatin accessibility complex (CHRAC) at the SV40 origin of DNA replication.

Published in:

EMBO Journal, 1998, v. 17, n. 12, p. 3428, doi. 10.1093/emboj/17.12.3428

By:

Alexiadis, Vassilios;
Varga-Weisz, Patrick D.;
Bonte, Edgar;
Becker, Peter B.;
Gruss, Claudia

Publication type:

Article

Current Analytical Strategies in Studying Chromatin-Associated-Proteome (Chromatome).

Published in:

Molecules, 2021, v. 26, n. 21, p. 6694, doi. 10.3390/molecules26216694

By:

Khan, Niamat;
Shahid, Sidra;
Asif, Abdul R.

Publication type:

Article

Interplay between chromatin modulators and histone acetylation regulates the formation of accessible chromatin in the upstream regulatory region of fission yeast fbp1.

Published in:

Genes & Genetic Systems, 2017, v. 92, n. 6, p. 267, doi. 10.1266/ggs.17-00018

By:

Akira Adachi;
Satoshi Senmatsu;
Ryuta Asada;
Takuya Abe;
Hoffman, Charles S.;
Kunihiro Ohta;
Kouji Hirota

Publication type:

Article

Reconstitution of Drosophila and human chromatins by wheat germ cell-free co-expression system.

Published in:

BMC Biotechnology, 2020, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12896-020-00655-6

By:

Okimune, Kei-ichi;
Nagy, Szilvia K.;
Hataya, Shogo;
Endo, Yaeta;
Takasuka, Taichi E.

Publication type:

Article

Mapping Chromatin Occupancy of Ppp1r1b-lncRNA Genome-Wide Using Chromatin Isolation by RNA Purification (ChIRP)-seq.

Published in:

Cells (2073-4409), 2023, v. 12, n. 24, p. 2805, doi. 10.3390/cells12242805

By:

Hwang, John;
Kang, Xuedong;
Wolf, Charlotte;
Touma, Marlin

Publication type:

Article

Transcriptionally Active Chromatin—Lessons Learned from the Chicken Erythrocyte Chromatin Fractionation.

Published in:

Cells (2073-4409), 2021, v. 10, n. 6, p. 1354, doi. 10.3390/cells10061354

By:

Beacon, Tasnim H.;
Davie, James R.

Publication type:

Article

Peculiarities of Plasmodium falciparum Gene Regulation and Chromatin Structure.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 10, p. 5168, doi. 10.3390/ijms22105168

By:

Watzlowik, Maria Theresia;
Das, Sujaan;
Meissner, Markus;
Längst, Gernot;
Straub, Tobias

Publication type:

Article

You shall not pass! A Chromatin barrier story in plants.

Published in:

Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2022.888102

By:

Velay, Florent;
Méteignier, Louis-Valentin;
Laloi, Christophe

Publication type:

Article

Chromatin Loop Extrusion and Chromatin Unknotting.

Published in:

Polymers (20734360), 2018, v. 10, n. 10, p. 1126, doi. 10.3390/polym10101126

By:

Racko, Dusan;
Benedetti, Fabrizio;
Goundaroulis, Dimos;
Stasiak, Andrzej

Publication type:

Article

A new class of constitutively active super-enhancers is associated with fast recovery of 3D chromatin loops.

Published in:

BMC Bioinformatics, 2019, v. 20, n. 3, p. 1, doi. 10.1186/s12859-019-2646-3

By:

Ryu, Jayoung;
Kim, Hyunwoong;
Lee, Andrew J.;
Jung, Inkyung;
Yang, Dongchan

Publication type:

Article

Editorial: Chromatin Stability and Dynamics: Targeting and Recruitment of Chromatin Modifiers.

Published in:

2021

By:

Farrona, Sara;
Mozgová, Iva;
Archacki, Rafal;
Casas-Mollano, Juan Armando

Publication type:

Editorial

Expanding the roles of chromatin insulators in nuclear architecture, chromatin organization and genome function.

Published in:

Cellular & Molecular Life Sciences, 2014, v. 71, n. 21, p. 4089, doi. 10.1007/s00018-014-1672-6

By:

Schoborg, Todd;
Labrador, Mariano

Publication type:

Article

Phase Separation in Chromatin Organization and Human Diseases.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 11, p. 5156, doi. 10.3390/ijms26115156

By:

Zhai, Ziwei;
Meng, Fei;
Kuang, Junqi;
Pei, Duanqing

Publication type:

Article

The roles of chromatin regulatory factors in endometriosis.

Published in:

Journal of Assisted Reproduction & Genetics, 2024, v. 41, n. 4, p. 863, doi. 10.1007/s10815-024-03026-8

By:

Luo, Liumei;
Zhao, Ling;
Cui, Lanyu;
Peng, Chuyu;
Ou, Shanshan;
Zeng, Yan;
Liu, Bo

Publication type:

Article

Relationship between nuclear chromatin decondensation (NCD) in vitro and other sperm parameters and their predictive value on fertilization rate in IVF program.

Published in:

Journal of Assisted Reproduction & Genetics, 2005, v. 22, n. 7/8, p. 301, doi. 10.1007/s10815-005-6002-3

By:

Hammadeh, Mohamed K.;
Bernardi, Alexandra;
Zeginiadou, Theodosia;
Amer, Ahmed;
Schmidt, Werner

Publication type:

Article

The chromatin landscape of the ribosomal RNA genes in mouse and human.

Published in:

Chromosome Research, 2019, v. 27, n. 1/2, p. 31, doi. 10.1007/s10577-018-09603-9

By:

Moss, Tom;
Mars, Jean-Clement;
Tremblay, Michel G.;
Sabourin-Felix, Marianne

Publication type:

Article

Chromatin accessibility is associated with therapeutic response in prostate cancer.

Published in:

Oncology Letters, 2024, v. 28, n. 6, p. N.PAG, doi. 10.3892/ol.2024.14738

By:

Lee, Sanghoon;
Lee, Da Young;
So, Insuk;
Chun, Jung Nyeo;
Jeon, Ju-Hong

Publication type:

Article

Aberrant chromatin remodeling in gynecological cancer (Review).

Published in:

Oncology Letters, 2017, v. 14, n. 5, p. 5107, doi. 10.3892/ol.2017.6891

By:

RYUICHIRO OKAWA;
KOUJI BANNO;
MIHO IIDA;
MEGUMI YANOKURA;
TAKASHI TAKEDA;
MOITO IIJIMA;
HARUKO KUNITOMI-IRIE;
KANAKO NAKAMURA;
MASATAKA ADACHI;
KIYOKO UMENE;
YUYA NOGAMI;
KENTA MASUDA;
YUSUKE KOBAYASHI;
EIICHIRO TOMINAGA;
DAISUKE AOKI

Publication type:

Article

Facilitating transcriptional transitions: an overview of chromatin bivalency in plants.

Published in:

Journal of Experimental Botany, 2023, v. 74, n. 6, p. 1770, doi. 10.1093/jxb/erad029

By:

Faivre, Léa;
Schubert, Daniel

Publication type:

Article

The matrix revolutions: towards the decoding of the plant chromatin three-dimensional reality.

Published in:

Journal of Experimental Botany, 2020, v. 71, n. 17, p. 5129, doi. 10.1093/jxb/eraa322

By:

Huang, Ying;
Rodriguez-Granados, Natalia Yaneth;
Latrasse, David;
Raynaud, Cecile;
Benhamed, Moussa;
Ramirez-Prado, Juan Sebastian

Publication type:

Article

Exploring the Role of E6 and E7 Oncoproteins in Cervical Oncogenesis through MBD2/3-NuRD Complex Chromatin Remodeling.

Published in:

Genes, 2024, v. 15, n. 5, p. 560, doi. 10.3390/genes15050560

By:

Fudulu, Alina;
Diaconu, Carmen Cristina;
Iancu, Iulia Virginia;
Plesa, Adriana;
Albulescu, Adrian;
Bostan, Marinela;
Socolov, Demetra Gabriela;
Stoian, Irina Liviana;
Balan, Raluca;
Anton, Gabriela;
Botezatu, Anca

Publication type:

Article

Polymer Modeling Reveals Interplay between Physical Properties of Chromosomal DNA and the Size and Distribution of Condensin-Based Chromatin Loops.

Published in:

Genes, 2023, v. 14, n. 12, p. 2193, doi. 10.3390/genes14122193

By:

Kolbin, Daniel;
Walker, Benjamin L.;
Hult, Caitlin;
Stanton, John Donoghue;
Adalsteinsson, David;
Forest, M. Gregory;
Bloom, Kerry

Publication type:

Article

The Conserved Chromatin Remodeler SMARCAD1 Interacts with TFIIIC and Architectural Proteins in Human and Mouse.

Published in:

Genes, 2023, v. 14, n. 9, p. 1793, doi. 10.3390/genes14091793

By:

Sachs, Parysatis;
Bergmaier, Philipp;
Treutwein, Katrin;
Mermoud, Jacqueline E.

Publication type:

Article

Phase Separation: Direct and Indirect Driving Force for High-Order Chromatin Organization.

Published in:

Genes, 2023, v. 14, n. 2, p. 499, doi. 10.3390/genes14020499

By:

Li, Xiaoli;
An, Ziyang;
Zhang, Wenqing;
Li, Feifei

Publication type:

Article

Role of Chromatin Replication in Transcriptional Plasticity, Cell Differentiation and Disease.

Published in:

Genes, 2022, v. 13, n. 6, p. 1002, doi. 10.3390/genes13061002

By:

López-Jiménez, Elena;
González-Aguilera, Cristina

Publication type:

Article

Driving Chromatin Organisation through N6-methyladenosine Modification of RNA: What Do We Know and What Lies Ahead?

Published in:

Genes, 2022, v. 13, n. 2, p. 340, doi. 10.3390/genes13020340

By:

Selmi, Tommaso;
Lanzuolo, Chiara

Publication type:

Article

Antagonising Chromatin Remodelling Activities in the Regulation of Mammalian Ribosomal Transcription.

Published in:

Genes, 2021, v. 12, n. 7, p. 961, doi. 10.3390/genes12070961

By:

Tariq, Kanwal;
Östlund Farrants, Ann-Kristin

Publication type:

Article

Chromatin Interaction Analysis with Updated ChIA-PET Tool (V3).

Published in:

Genes, 2019, v. 10, n. 7, p. 554, doi. 10.3390/genes10070554

By:

Li, Guoliang;
Sun, Tongkai;
Chang, Huidan;
Cai, Liuyang;
Hong, Ping;
Zhou, Qiangwei

Publication type:

Article

Chromatin as a Platform for Modulating the Replication Stress Response.

Published in:

Genes, 2018, v. 9, n. 12, p. 622, doi. 10.3390/genes9120622

By:

Fournier, Louis-Alexandre;
Kumar, Arun;
Stirling, Peter C.

Publication type:

Article

Chromatin Dynamics in Lineage Commitment and Cellular Reprogramming.

Published in:

Genes, 2015, v. 6, n. 3, p. 641, doi. 10.3390/genes6030641

By:

Shchuka, Virlana M.;
Malek-Gilani, Nakisa;
Singh, Gurdeep;
Langroudi, Lida;
Dhaliwal, Navroop K.;
Moorthy, Sakthi D.;
Davidson, Scott;
Macpherson, Neil N.;
Mitchell, Jennifer A.

Publication type:

Article

Contribution of Topological Domains and Loop Formation to 3D Chromatin Organization.

Published in:

Genes, 2015, v. 6, n. 3, p. 734, doi. 10.3390/genes6030734

By:

Ea, Vuthy;
Baudement, Marie-Odile;
Lesne, Annick;
Forné, Thierry

Publication type:

Article

Chromatin Dynamics in the Regulation of CFTR Expression.

Published in:

Genes, 2015, v. 6, n. 3, p. 543, doi. 10.3390/genes6030543

By:

Gosalia, Nehal;
Harris, Ann

Publication type:

Article

Long range chromatin organization.

Published in:

Transcription (2154-1264), 2014, v. 5, n. 3, p. N.PAG, doi. 10.4161/trns.28726

By:

Acuña, Luciana I Gómez;
Kornblihtt, Alberto R

Publication type:

Article