Works matching AU van der Valk, Tom

Results: 21
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    Whole‐genome resequencing facilitates the development of a 50K single nucleotide polymorphism genotyping array for Scots pine (Pinus sylvestris L.) and its transferability to other pine species.

    Published in:
    Plant Journal, 2024, v. 117, n. 3, p. 944, doi. 10.1111/tpj.16535
    By:
    • Estravis Barcala, Maximiliano;
    • van der Valk, Tom;
    • Chen, Zhiqiang;
    • Funda, Tomas;
    • Chaudhary, Rajiv;
    • Klingberg, Adam;
    • Fundova, Irena;
    • Suontama, Mari;
    • Hallingbäck, Henrik;
    • Bernhardsson, Carolina;
    • Nystedt, Björn;
    • Ingvarsson, Pär K.;
    • Sherwood, Ellen;
    • Street, Nathaniel;
    • Gyllensten, Ulf;
    • Nilsson, Ove;
    • Wu, Harry X.
    Publication type:
    Article
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    Unravelling reference bias in ancient DNA datasets.

    Published in:
    Bioinformatics, 2024, v. 40, n. 7, p. 1, doi. 10.1093/bioinformatics/btae436
    By:
    • Dolenz, Stephanie;
    • van der Valk, Tom;
    • Jin, Chenyu;
    • Oppenheimer, Jonas;
    • Sharif, Muhammad Bilal;
    • Orlando, Ludovic;
    • Shapiro, Beth;
    • Dalén, Love;
    • Heintzman, Peter D
    Publication type:
    Article
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    Population genomics of the muskox' resilience in the near absence of genetic variation.

    Published in:
    Molecular Ecology, 2024, v. 33, n. 2, p. 1, doi. 10.1111/mec.17205
    By:
    • Pečnerová, Patrícia;
    • Lord, Edana;
    • Garcia‐Erill, Genís;
    • Hanghøj, Kristian;
    • Rasmussen, Malthe Sebro;
    • Meisner, Jonas;
    • Liu, Xiaodong;
    • van der Valk, Tom;
    • Santander, Cindy G.;
    • Quinn, Liam;
    • Lin, Long;
    • Liu, Shanlin;
    • Carøe, Christian;
    • Dalerum, Fredrik;
    • Götherström, Anders;
    • Måsviken, Johannes;
    • Vartanyan, Sergey;
    • Raundrup, Katrine;
    • Al‐Chaer, Amal;
    • Rasmussen, Linett
    Publication type:
    Article
    7

    Genomic trajectories of a near-extinction event in the Chatham Island black robin.

    Published in:
    BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-022-08963-1
    By:
    • von Seth, Johanna;
    • van der Valk, Tom;
    • Lord, Edana;
    • Sigeman, Hanna;
    • Olsen, Remi-André;
    • Knapp, Michael;
    • Kardailsky, Olga;
    • Robertson, Fiona;
    • Hale, Marie;
    • Houston, Dave;
    • Kennedy, Euan;
    • Dalén, Love;
    • Norén, Karin;
    • Massaro, Melanie;
    • Robertson, Bruce C.;
    • Dussex, Nicolas
    Publication type:
    Article
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    Genomic trajectories of a near-extinction event in the Chatham Island black robin.

    Published in:
    BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-022-08963-1
    By:
    • von Seth, Johanna;
    • van der Valk, Tom;
    • Lord, Edana;
    • Sigeman, Hanna;
    • Olsen, Remi-André;
    • Knapp, Michael;
    • Kardailsky, Olga;
    • Robertson, Fiona;
    • Hale, Marie;
    • Houston, Dave;
    • Kennedy, Euan;
    • Dalén, Love;
    • Norén, Karin;
    • Massaro, Melanie;
    • Robertson, Bruce C.;
    • Dussex, Nicolas
    Publication type:
    Article
    9

    A Million Years of Mammoth Mitogenome Evolution.

    Published in:
    Molecular Biology & Evolution, 2025, v. 42, n. 4, p. 1, doi. 10.1093/molbev/msaf065
    By:
    • Chacón-Duque, J Camilo;
    • Thorpe, Jessica A Thomas;
    • Li, Wenxi;
    • Dehasque, Marianne;
    • Pečnerová, Patricia;
    • Barlow, Axel;
    • Díez-del-Molino, David;
    • Henneberger, Kirstin;
    • Jin, Chenyu;
    • Moreland, Kelsey N;
    • Paijmans, Johanna L A;
    • van der Valk, Tom;
    • Westbury, Michael V;
    • Wijnands, Flore;
    • Barnes, Ian;
    • Germonpré, Mietje;
    • Hall, Elizabeth;
    • Hewitson, Susan;
    • Mol, Dick;
    • Nikolskiy, Pavel
    Publication type:
    Article
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    Moose genomes reveal past glacial demography and the origin of modern lineages.

    Published in:
    BMC Genomics, 2020, v. 21, n. 1, p. N.PAG, doi. 10.1186/s12864-020-07208-3
    By:
    • Dussex, Nicolas;
    • Alberti, Federica;
    • Heino, Matti T.;
    • Olsen, Remi-Andre;
    • van der Valk, Tom;
    • Ryman, Nils;
    • Laikre, Linda;
    • Ahlgren, Hans;
    • Askeyev, Igor V.;
    • Askeyev, Oleg V.;
    • Shaymuratova, Dilyara N.;
    • Askeyev, Arthur O.;
    • Döppes, Doris;
    • Friedrich, Ronny;
    • Lindauer, Susanne;
    • Rosendahl, Wilfried;
    • Aspi, Jouni;
    • Hofreiter, Michael;
    • Lidén, Kerstin;
    • Dalén, Love
    Publication type:
    Article
    15

    Competitive mapping allows for the identification and exclusion of human DNA contamination in ancient faunal genomic datasets.

    Published in:
    BMC Genomics, 2020, v. 21, n. 1, p. N.PAG, doi. 10.1186/s12864-020-07229-y
    By:
    • Feuerborn, Tatiana R.;
    • Palkopoulou, Eleftheria;
    • van der Valk, Tom;
    • von Seth, Johanna;
    • Munters, Arielle R.;
    • Pečnerová, Patrícia;
    • Dehasque, Marianne;
    • Ureña, Irene;
    • Ersmark, Erik;
    • Lagerholm, Vendela Kempe;
    • Krzewińska, Maja;
    • Rodríguez-Varela, Ricardo;
    • Götherström, Anders;
    • Dalén, Love;
    • Díez-del-Molino, David
    Publication type:
    Article
    16

    Genomic insights into the conservation status of the world's last remaining Sumatran rhinoceros populations.

    Published in:
    Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-22386-8
    By:
    • von Seth, Johanna;
    • Dussex, Nicolas;
    • Díez-del-Molino, David;
    • van der Valk, Tom;
    • Kutschera, Verena E.;
    • Kierczak, Marcin;
    • Steiner, Cynthia C.;
    • Liu, Shanlin;
    • Gilbert, M. Thomas P.;
    • Sinding, Mikkel-Holger S.;
    • Prost, Stefan;
    • Guschanski, Katerina;
    • Nathan, Senthilvel K. S. S.;
    • Brace, Selina;
    • Chan, Yvonne L.;
    • Wheat, Christopher W.;
    • Skoglund, Pontus;
    • Ryder, Oliver A.;
    • Goossens, Benoit;
    • Götherström, Anders
    Publication type:
    Article
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    aMeta: an accurate and memory-efficient ancient metagenomic profiling workflow.

    Published in:
    Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-03083-9
    By:
    • Pochon, Zoé;
    • Bergfeldt, Nora;
    • Kırdök, Emrah;
    • Vicente, Mário;
    • Naidoo, Thijessen;
    • van der Valk, Tom;
    • Altınışık, N. Ezgi;
    • Krzewińska, Maja;
    • Dalén, Love;
    • Götherström, Anders;
    • Mirabello, Claudio;
    • Unneberg, Per;
    • Oskolkov, Nikolay
    Publication type:
    Article
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