Works by van Baarlen, Peter

Results: 35

Emerging molecular insights into the interaction between probiotics and the host intestinal mucosa.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 1, p. 66, doi. 10.1038/nrmicro2690

By:

Bron, Peter A.;
van Baarlen, Peter;
Kleerebezem, Michiel

Publication type:

Article

Molecular Phylogeny of the Plant Pathogenic Genus Botrytis and the Evolution of Host Specificity.

Published in:

Molecular Biology & Evolution, 2005, v. 22, n. 2, p. 333

By:

Staats, Martijn;
Van Baarlen, Peter;
Van Kan, Jan A. L.

Publication type:

Article

KREAP: an automated Galaxy platform to quantify in vitro re-epithelialization kinetics.

Published in:

GigaScience, 2018, v. 7, n. 7, p. N.PAG, doi. 10.1093/gigascience/giy078

By:

Fernandez-Gutierrez, Marcela M;
van Zessen, David B H;
van Baarlen, Peter;
Kleerebezem, Michiel;
Stubbs, Andrew P

Publication type:

Article

Choroid plexus organoids reveal mechanisms of Streptococcus suis translocation at the blood-cerebrospinal fluid barrier.

Published in:

Fluids & Barriers of the CNS, 2025, v. 22, n. 1, p. 1, doi. 10.1186/s12987-025-00627-y

By:

Zhao, Tiantong;
Pellegrini, Laura;
van der Hee, Bart;
Boekhorst, Jos;
Fernandes, Aline;
Brugman, Sylvia;
van Baarlen, Peter;
Wells, Jerry M.

Publication type:

Article

Temporal and spatial interplay of microbiota and intestinal mucosa drive establishment of immune homeostasis in conventionalized mice.

Published in:

Mucosal Immunology (1933-0219), 2012, v. 5, n. 5, p. 567, doi. 10.1038/mi.2012.32

By:

El Aidy, Sahar;
van Baarlen, Peter;
Derrien, Muriel;
Lindenbergh-Kortleve, Dicky J;
Hooiveld, Guido;
Levenez, Florence;
Doré, Joël;
Dekker, Jan;
Samsom, Janneke N;
Nieuwenhuis, Edward E S;
Kleerebezem, Michiel

Publication type:

Article

The occurrence of phenotypically complementary apomixis-recombinants in crosses between sexual and apomictic dandelions (Taraxacum officinale).

Published in:

Sexual Plant Reproduction, 2003, v. 16, n. 2, p. 71, doi. 10.1007/s00497-003-0177-5

By:

van Dijk, Peter J.;
van Baarlen, Peter;
de Jong, J. Hans

Publication type:

Article

Comparison of iPSC-derived human intestinal epithelial cells with Caco-2 cells and human in vivo data after exposure to Lactiplantibacillus plantarum WCFS1.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-74802-w

By:

Janssen, Aafke W. F.;
van der Lugt, Benthe;
Duivenvoorde, Loes P. M.;
Vos, Arjan Paul;
Bastiaan-Net, Shanna;
Tomassen, Monic M. M.;
Verbokkem, Janine A. C.;
Blok-Heimerikx, Emmie;
Hooiveld, Guido J. E. J.;
van Baarlen, Peter;
Ferrier, Laurent;
van der Zande, Meike

Publication type:

Article

Vectorial secretion of interleukin-8 mediates autocrine signalling in intestinal epithelial cells via apically located CXCR1.

Published in:

BMC Research Notes, 2013, v. 6, n. 1, p. 1, doi. 10.1186/1756-0500-6-431

By:

Rossi, Oriana;
Karczewski, Jurgen;
Stolte, Ellen H.;
Brummer, Robert J.;
van Nieuwenhoven, Michiel A.;
Meijerink, Marjolein;
van Neerven, Joost R.;
van Ijzendoorn, Sven C.;
van Baarlen, Peter;
Wells, Jerry M.

Publication type:

Article

Sialyllactose and Galactooligosaccharides Promote Epithelial Barrier Functioning and Distinctly Modulate Microbiota Composition and Short Chain Fatty Acid Production In Vitro.

Published in:

Frontiers in Immunology, 2019, p. N.PAG, doi. 10.3389/fimmu.2019.00094

By:

Perdijk, Olaf;
van Baarlen, Peter;
Fernandez-Gutierrez, Marcela M.;
van den Brink, Erik;
Schuren, Frank H. J.;
Brugman, Sylvia;
Savelkoul, Huub F. J.;
Kleerebezem, Michiel;
van Neerven, R. J. Joost

Publication type:

Article

Identification of plasminogen-binding sites in Streptococcus suis enolase that contribute to bacterial translocation across the blood-brain barrier.

Published in:

Frontiers in Cellular & Infection Microbiology, 2024, p. 01, doi. 10.3389/fcimb.2024.1356628

By:

Tiantong Zhao;
Gussak, Alex;
van der Hee, Bart;
Brugman, Sylvia;
van Baarlen, Peter;
Wells, Jerry M.

Publication type:

Article

Special Issue "Omics Research of Pathogenic Microorganisms".

Published in:

Genes, 2023, v. 14, n. 6, p. 1229, doi. 10.3390/genes14061229

By:

Baarlen, Peter van

Publication type:

Article

Clonal Interference and Mutation Bias in Small Bacterial Populations in Droplets.

Published in:

Genes, 2021, v. 12, n. 2, p. 223, doi. 10.3390/genes12020223

By:

Ruelens, Philip;
de Visser, J. Arjan G. M.;
van Baarlen, Ir. Peter

Publication type:

Article

Campylobacter jejuni Cas9 Modulates the Transcriptome in Caco-2 Intestinal Epithelial Cells.

Published in:

Genes, 2020, v. 11, n. 10, p. 1193, doi. 10.3390/genes11101193

By:

Saha, Chinmoy;
Horst-Kreft, Deborah;
Kross, Inez;
van der Spek, Peter J.;
Louwen, Rogier;
van Baarlen, Peter

Publication type:

Article

Differential Distribution of Type II CRISPR-Cas Systems in Agricultural and Nonagricultural Campylobacter coli and Campylobacter jejuni Isolates Correlates with Lack of Shared Environments.

Published in:

Genome Biology & Evolution, 2015, v. 7, n. 9, p. 2663, doi. 10.1093/gbe/evv174

By:

Pearson, Bruce M.;
Louwen, Rogier;
van Baarlen, Peter;
van Vliet, Arnoud H. M.

Publication type:

Article

Metabolic Context of the Competence-Induced Checkpoint for Cell Replication in Streptococcus suis.

Published in:

PLoS ONE, 2016, v. 11, n. 5, p. 1, doi. 10.1371/journal.pone.0153571

By:

Zaccaria, Edoardo;
Wells, Jerry M.;
van Baarlen, Peter

Publication type:

Article

A Zebrafish Larval Model to Assess Virulence of Porcine Streptococcus suis Strains.

Published in:

PLoS ONE, 2016, v. 11, n. 3, p. 1, doi. 10.1371/journal.pone.0151623

By:

Zaccaria, Edoardo;
Cao, Rui;
Wells, Jerry M.;
van Baarlen, Peter

Publication type:

Article

Genomics of plant-associated microbes.

Published in:

Microbial Biotechnology, 2009, v. 2, n. 4, p. 406, doi. 10.1111/j.1751-7915.2009.00127.x

By:

Van Baarlen, Peter;
Siezen, Roland J.

Publication type:

Article

Temporal Regulation of the Transformasome and Competence Development in Streptococcus suis.

Published in:

Frontiers in Microbiology, 2016, v. 7, p. 1, doi. 10.3389/fmicb.2016.01922

By:

Zaccaria, Edoardo;
Wels, Michiel;
van Baarlen, Peter;
Wells, Jerry M.

Publication type:

Article

Phytotoxic Nep1-like proteins from the necrotrophic fungus Botrytis cinerea associate with membranes and the nucleus of plant cells.

Published in:

New Phytologist, 2008, v. 177, n. 2, p. 493, doi. 10.1111/j.1469-8137.2007.02274.x

By:

Schouten, Alexander;
Van Baarlen, Peter;
Van Kan, Jan A. L.

Publication type:

Article

Gut bacteria-host metabolic interplay during conventionalisation of the mouse germfree colon.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 4, p. 743, doi. 10.1038/ismej.2012.142

By:

El Aidy, Sahar;
Derrien, Muriel;
Merrifield, Claire A;
Levenez, Florence;
Doré, Joël;
Boekschoten, Mark V;
Dekker, Jan;
Holmes, Elaine;
Zoetendal, Erwin G;
van Baarlen, Peter;
Claus, Sandrine P;
Kleerebezem, Michiel

Publication type:

Article

Environmental and maternal factors shaping tonsillar microbiota development in piglets.

Published in:

BMC Microbiology, 2022, v. 22, n. 1, p. 1, doi. 10.1186/s12866-022-02625-8

By:

Fredriksen, Simen;
Guan, Xiaonan;
Boekhorst, Jos;
Molist, Francesc;
van Baarlen, Peter;
Wells, Jerry M.

Publication type:

Article

Resistome expansion in disease-associated human gut microbiomes.

Published in:

Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01610-1

By:

Fredriksen, Simen;
de Warle, Stef;
van Baarlen, Peter;
Boekhorst, Jos;
Wells, Jerry M.

Publication type:

Article

Functional analysis of NLP genes from Botrytis elliptica.

Published in:

Molecular Plant Pathology, 2007, v. 8, n. 2, p. 209, doi. 10.1111/j.1364-3703.2007.00382.x

By:

STAATS, MARTIJN;
VAN BAARLEN, PETER;
SCHOUTEN, ALEXANDER;
VAN KAN, JAN A. L.

Publication type:

Article

Histochemical and genetic analysis of host and non-host interactions of Arabidopsis with three Botrytis species: an important role for cell death control.

Published in:

Molecular Plant Pathology, 2007, v. 8, n. 1, p. 41, doi. 10.1111/j.1364-3703.2006.00367.x

By:

VAN BAARLEN, PETER;
WOLTERING, ERNST J.;
STAATS, MARTIJN;
VAN KAN, JAN A. L.

Publication type:

Article

Induction of programmed cell death in lily by the fungal pathogenBotrytis elliptica.

Published in:

Molecular Plant Pathology, 2004, v. 5, n. 6, p. 559, doi. 10.1111/j.1364-3703.2004.00253.x

By:

Van Baarlen, Peter;
Staats, Martijn;
Van Kan, Jan A. L.

Publication type:

Article

Control of Competence for DNA Transformation in <i>Streptococcus suis</i> by Genetically Transferable Pherotypes.

Published in:

PLoS ONE, 2014, v. 9, n. 6, p. 1, doi. 10.1371/journal.pone.0099394

By:

Zaccaria, Edoardo;
van Baarlen, Peter;
de Greeff, Astrid;
Morrison, Donald A.;
Smith, Hilde;
Wells, Jerry M.

Publication type:

Article

Carbohydrate Availability Regulates Virulence Gene Expression in <i>Streptococcus suis</i>.

Published in:

PLoS ONE, 2014, v. 9, n. 3, p. 1, doi. 10.1371/journal.pone.0089334

By:

Ferrando, M. Laura;
van Baarlen, Peter;
Orrù, Germano;
Piga, Rosaria;
Bongers, Roger S.;
Wels, Michiel;
De Greeff, Astrid;
Smith, Hilde E.;
Wells, Jerry M.

Publication type:

Article

Gene Expression Analysis of Peripheral Cells for Subclassification of Pediatric Inflammatory Bowel Disease in Remission.

Published in:

PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0079549

By:

van Lierop, Pieter P. E.;
Swagemakers, Sigrid M.;
de Bie, Charlotte I.;
Middendorp, Sabine;
van Baarlen, Peter;
Samsom, Janneke N.;
van IJcken, Wilfred F. J.;
Escher, Johanna C.;
van der Spek, Peter J.;
Nieuwenhuis, Edward E. S.

Publication type:

Article

Active Human and Porcine Serum Induce Competence for Genetic Transformation in the Emerging Zoonotic Pathogen Streptococcus suis.

Published in:

Pathogens, 2021, v. 10, n. 2, p. 156, doi. 10.3390/pathogens10020156

By:

Ferrando, Maria Laura;
Gussak, Alex;
Mentink, Saskia;
Gutierrez, Marcela Fernandez;
Baarlen, Peter van;
Wells, Jerry Mark

Publication type:

Article

Correlation between brain function and ADHD symptom changes in children with ADHD following a few-foods diet: an open-label intervention trial.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-01684-7

By:

Hontelez, Saartje;
Stobernack, Tim;
Pelsser, Lidy M.;
van Baarlen, Peter;
Frankena, Klaas;
Groefsema, Martine M.;
Kleerebezem, Michiel;
Rodrigues Pereira, Rob;
Postma, Elbrich M.;
Smeets, Paul A. M.;
Stopyra, Marion A.;
Zwiers, Marcel P.;
Aarts, Esther

Publication type:

Article

Corrigendum: Sialyllactose and Galactooligosaccharides Promote Epithelial Barrier Functioning and Distinctly Modulate Microbiota Composition and Short Chain Fatty Acid Production In Vitro.

Published in:

2019

By:

Perdijk, Olaf;
van Baarlen, Peter;
Fernandez-Gutierrez, Marcela M.;
van den Brink, Erik;
Schuren, Frank H. J.;
Brugman, Sylvia;
Savelkoul, Huub F. J.;
Kleerebezem, Michiel;
van Neerven, R. J. Joost

Publication type:

Correction Notice

Culturomics of the pig tonsil microbiome identifies new species and an untapped source of novel antimicrobials.

Published in:

Microbiome, 2025, v. 13, n. 1, p. 1, doi. 10.1186/s40168-025-02064-3

By:

de Oliveira, Isabela Maria Fernandes;
Fredriksen, Simen;
Gutiérrez, Marcela Fernández;
Harmsen, Hermie J. M.;
Boekhorst, Jos;
van Baarlen, Peter;
Wells, Jerry M.

Publication type:

Article

Visualisation of dCas9 target search in vivo using an open-microscopy framework.

Published in:

Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-11514-0

By:

Martens, Koen J. A.;
van Beljouw, Sam P. B.;
van der Els, Simon;
Vink, Jochem N. A.;
Baas, Sander;
Vogelaar, George A.;
Brouns, Stan J. J.;
van Baarlen, Peter;
Kleerebezem, Michiel;
Hohlbein, Johannes

Publication type:

Article

Are bacteriophage defence and virulence two sides of the same coin in Campylobacter jejuni?

Published in:

Biochemical Society Transactions, 2013, v. 41, n. 6, p. 1475, doi. 10.1042/BST20130127

By:

Louwen, Rogier;
van Baarlen, Peter

Publication type:

Article

Identification of the transcriptional response of human intestinal mucosa to Lactobacillus plantarum WCFS1 in vivo.

Published in:

BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-374

By:

Troost, Freddy J.;
van Baarlen, Peter;
Lindsey, Patrick;
Kodde, Andrea;
de Vos, Willem M.;
Kleerebezem, Michiel;
Brummer, Robert-Jan M.

Publication type:

Article