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Estimation of Seasonal Influenza Attack Rates and Antibody Dynamics in Children Using Cross-Sectional Serological Data.
Published in:
2022
By:
- Minter, Amanda;
- Hoschler, Katja;
- Jagne, Ya Jankey;
- Sallah, Hadijatou;
- Armitage, Edwin;
- Lindsey, Benjamin;
- Hay, James A;
- Riley, Steven;
- Silva, Thushan I de;
- Kucharski, Adam J;
- de Silva, Thushan I
Publication type:
journal article
Potential impact of influenza vaccine roll-out on antibiotic use in Africa.
Published in:
2018
By:
- Knight, Gwenan M;
- Clarkson, Madeleine;
- Silva, Thushan I de;
- de Silva, Thushan I
Publication type:
journal article
Development and Characterisation of a Four-Plex Assay to Measure Streptococcus pyogenes Antigen-Specific IgG in Human Sera.
Published in:
Methods & Protocols, 2022, v. 5, n. 4, p. 55, doi. 10.3390/mps5040055
By:
- Keeley, Alexander J.;
- Carducci, Martina;
- Massai, Luisa;
- Pizza, Mariagrazia;
- de Silva, Thushan I.;
- Moriel, Danilo G.;
- Rossi, Omar
Publication type:
Article
Procalcitonin Is Not a Reliable Biomarker of Bacterial Coinfection in People With Coronavirus Disease 2019 Undergoing Microbiological Investigation at the Time of Hospital Admission.
Published in:
Open Forum Infectious Diseases, 2022, v. 9, n. 5, p. 1, doi. 10.1093/ofid/ofac179
By:
- Relph, Katharine A;
- Russell, Clark D;
- Fairfield, Cameron J;
- Turtle, Lance;
- Silva, Thushan I de;
- Siggins, Matthew K;
- Drake, Thomas M;
- Thwaites, Ryan S;
- Abrams, Simon;
- Moore, Shona C;
- Hardwick, Hayley E;
- Oosthuyzen, Wilna;
- Harrison, Ewen M;
- Docherty, Annemarie B;
- Openshaw, Peter J M;
- Baillie, J Kenneth;
- Semple, Malcolm G;
- Ho, Antonia;
- Investigators, International Severe Acute Respiratory and Emerging Infections Consortium Coronavirus Clinical Characterisation Consortium (ISARIC4C)
Publication type:
Article
Roll-out of SARS-CoV-2 testing for healthcare workers at a large NHS Foundation Trust in the United Kingdom, March 2020.
Published in:
Eurosurveillance (15607917), 2020, v. 25, n. 14, p. 10, doi. 10.2807/1560-7917.ES.2020.25.14.2000433
By:
- Keeley, Alexander J.;
- Evans, Cariad;
- Colton, Hayley;
- Ankcorn, Michael;
- Cope, Alison;
- State, Amy;
- Bennett, Tracy;
- Giri, Prosenjit;
- de Silva, Thushan I.;
- Raza, Mohammad
Publication type:
Article
Evolution of viral variants in remdesivir-treated and untreated SARS-CoV-2-infected pediatrics patients.
Published in:
Journal of Medical Virology, 2022, v. 94, n. 1, p. 161, doi. 10.1002/jmv.27285
By:
- Boshier, Florencia A. T.;
- Pang, Juanita;
- Penner, Justin;
- Parker, Matthew;
- Alders, Nele;
- Bamford, Alasdair;
- Grandjean, Louis;
- Grunewald, Stephanie;
- Hatcher, James;
- Best, Timothy;
- Dalton, Caroline;
- Bynoe, Patricia Dyal;
- Frauenfelder, Claire;
- Köeglmeier, Jutta;
- Myerson, Phoebe;
- Roy, Sunando;
- Williams, Rachel;
- de Silva, Thushan I.;
- oldstein, Richard A.;
- Breuer, Judith
Publication type:
Article
Tracking SARS-CoV-2 mutations and variants through the COG-UK-Mutation Explorer.
Published in:
Virus Evolution, 2022, v. 8, n. 1, p. 1, doi. 10.1093/ve/veac023
By:
- Wright, Derek W;
- Harvey, William T;
- Hughes, Joseph;
- Cox, MacGregor;
- Peacock, Thomas P;
- Colquhoun, Rachel;
- Jackson, Ben;
- Orton, Richard;
- Nielsen, Morten;
- Hsu, Nienyun Sharon;
- consortium, The COVID-19 Genomics UK (COG-UK);
- Harrison, Ewan M;
- Silva, Thushan I de;
- Rambaut, Andrew;
- Peacock, Sharon J;
- Robertson, David L;
- Carabelli, Alessandro M
Publication type:
Article
mRNA vaccination drives differential mucosal neutralizing antibody profiles in naïve and SARS-CoV-2 previously-infected individuals.
Published in:
Frontiers in Immunology, 2022, v. 12, p. 1, doi. 10.3389/fimmu.2022.953949
By:
- Longet, Stephanie;
- Hargreaves, Alexander;
- Healy, Saoirse;
- Brown, Rebecca;
- Hornsby, Hailey R.;
- Meardon, Naomi;
- Tipton, Tom;
- Barnes, Eleanor;
- Dunachie, Susanna;
- Duncan, Christopher J. A.;
- Klenerman, Paul;
- Richter, Alex;
- Turtle, Lance;
- de Silva, Thushan I.;
- Carroll, Miles W.
Publication type:
Article
Immune Reconstitution Following Autologous Hematopoietic Stem Cell Transplantation for Multiple Sclerosis: A Review on Behalf of the EBMT Autoimmune Diseases Working Party.
Published in:
Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2021.813957
By:
- Cencioni, Maria Teresa;
- Genchi, Angela;
- Brittain, Gavin;
- de Silva, Thushan I.;
- Sharrack, Basil;
- Snowden, John Andrew;
- Alexander, Tobias;
- Greco, Raffaella;
- Muraro, Paolo A.
Publication type:
Article
Viral Evolution and Cytotoxic T Cell Restricted Selection in Acute Infant HIV-1 Infection.
Published in:
Scientific Reports, 2016, p. 29536, doi. 10.1038/srep29536
By:
- Garcia-Knight, Miguel A.;
- Slyker, Jennifer;
- Payne, Barbara Lohman;
- Pond, Sergei L. Kosakovsky;
- de Silva, Thushan I.;
- Chohan, Bhavna;
- Khasimwa, Brian;
- Mbori-Ngacha, Dorothy;
- John-Stewart, Grace;
- Rowland-Jones, Sarah L.;
- Esbjörnsson, Joakim
Publication type:
Article
Genomic and Epidemiological Analysis of SARS-CoV-2 Viruses in Sri Lanka.
Published in:
Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.722838
By:
- Jeewandara, Chandima;
- Jayathilaka, Deshni;
- Ranasinghe, Diyanath;
- Hsu, Nienyun Sharon;
- Ariyaratne, Dinuka;
- Jayadas, Tibutius Thanesh;
- Panambara Arachchige, Deshan Madhusanka;
- Lindsey, Benjamin B.;
- Gomes, Laksiri;
- Parker, Matthew D.;
- Wijewickrama, Ananda;
- Karunaratne, Malika;
- Ogg, Graham S.;
- de Silva, Thushan I.;
- Malavige, Gathsaurie Neelika
Publication type:
Article
Rapid feedback on hospital onset SARS-CoV-2 infections combining epidemiological and sequencing data.
Published in:
eLife, 2021, p. 1, doi. 10.7554/eLife.65828
By:
- Stirrup, Oliver;
- Hughes, Joseph;
- Parker, Matthew;
- Partridge, David G.;
- Shepherd, James G.;
- Blackstone, James;
- Coll, Francesc;
- Keeley, Alexander;
- Lindsey, Benjamin B.;
- Marek, Aleksandra;
- Peters, Christine;
- Singer, Joshua B.;
- Tamuri, Asif;
- de Silva, Thushan I.;
- Thomson, Emma C.;
- Breuer, Judith
Publication type:
Article
Respiratory syncytial, parainfluenza and influenza virus infection in young children with acute lower respiratory infection in rural Gambia.
Published in:
Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-54059-4
By:
- Mackenzie, Grant A.;
- Vilane, Aminata;
- Salaudeen, Rasheed;
- Hogerwerf, Lenny;
- van den Brink, Sharon;
- Wijsman, Lisa A.;
- Overduin, Pieter;
- Janssens, Thierry K. S.;
- de Silva, Thushan I.;
- van der Sande, Marianne A. B.;
- Kampmann, Beate;
- Meijer, Adam
Publication type:
Article
High burden and seasonal variation of paediatric scabies and pyoderma prevalence in The Gambia: A cross-sectional study.
Published in:
PLoS Neglected Tropical Diseases, 2019, v. 13, n. 10, p. 1, doi. 10.1371/journal.pntd.0007801
By:
- Armitage, Edwin P.;
- Senghore, Elina;
- Darboe, Saffiatou;
- Barry, Momodou;
- Camara, Janko;
- Bah, Sulayman;
- Marks, Michael;
- Cerami, Carla;
- Roca, Anna;
- Antonio, Martin;
- Turner, Claire E.;
- de Silva, Thushan I.
Publication type:
Article
Outcome of COVID-19 in hospitalised immunocompromised patients: An analysis of the WHO ISARIC CCP-UK prospective cohort study.
Published in:
PLoS Medicine, 2023, v. 19, n. 1, p. 1, doi. 10.1371/journal.pmed.1004086
By:
- Turtle, Lance;
- Thorpe, Mathew;
- Drake, Thomas M.;
- Swets, Maaike;
- Palmieri, Carlo;
- Russell, Clark D.;
- Ho, Antonia;
- Aston, Stephen;
- Wootton, Daniel G.;
- Richter, Alex;
- de Silva, Thushan I.;
- Hardwick, Hayley E.;
- Leeming, Gary;
- Law, Andy;
- Openshaw, Peter J. M.;
- Harrison, Ewen M.;
- Baillie, J. Kenneth;
- Semple, Malcolm G.;
- Docherty, Annemarie B.
Publication type:
Article
Efficient overexpression and purification of severe acute respiratory syndrome coronavirus 2 nucleocapsid proteins in Escherichia coli.
Published in:
Biochemical Journal, 2024, v. 481, n. 11, p. 669, doi. 10.1042/BCJ20240019
By:
- Brudenell, Emma L.;
- Pohare, Manoj B.;
- Zafred, Domen;
- Phipps, Janine;
- Hornsby, Hailey R.;
- Darby, John F.;
- Junxiao Dai;
- Liggett, Ellen;
- Cain, Kathleen M.;
- Barran, Perdita E.;
- de Silva, Thushan I.;
- Sayers, Jon R.
Publication type:
Article
Complexities in Predicting the Immunogenicity of Live Attenuated Influenza Vaccines.
Published in:
Clinical Infectious Diseases, 2020, v. 79, n. 10, p. 2235, doi. 10.1093/cid/ciz773
By:
- Lindsey, Benjamin B;
- Höschler, Katja;
- Silva, Thushan I de
Publication type:
Article
Community-acquired Invasive Bacterial Disease in Urban Gambia, 2005–2015: A Hospital-based Surveillance.
Published in:
Clinical Infectious Diseases, 2019, v. 69, p. S105, doi. 10.1093/cid/ciz463
By:
- Darboe, Saffiatou;
- Okomo, Uduak;
- Muhammad, Abdul-Khalie;
- Ceesay, Buntung;
- Jallow, Mamadou;
- Usuf, Effua;
- Tweed, Sam;
- Akpalu, Edem;
- Kwambana-Adams, Brenda;
- Kariuki, Samuel;
- Antonio, Martin;
- Bradbury, Richard S;
- Forrest, Karen;
- Silva, Thushan I de;
- Lawal, Bolarinde Joseph;
- Nwakanma, Davis;
- Secka, Ousman;
- Roca, Anna
Publication type:
Article
Early Virological and Immunological Events in Asymptomatic Epstein-Barr Virus Infection in African Children.
Published in:
PLoS Pathogens, 2015, v. 11, n. 3, p. 1, doi. 10.1371/journal.ppat.1004746
By:
- Jayasooriya, Shamanthi;
- de Silva, Thushan I.;
- Njie-jobe, Jainaba;
- Sanyang, Chilel;
- Leese, Alison M.;
- Bell, Andrew I.;
- McAulay, Karen A.;
- Yanchun, Peng;
- Long, Heather M.;
- Dong, Tao;
- Whittle, Hilton C.;
- Rickinson, Alan B.;
- Rowland-Jones, Sarah L.;
- Hislop, Andrew D.;
- Flanagan, Katie L.
Publication type:
Article
Monocytes Regulate the Mechanism of T-cell Death by Inducing Fas-Mediated Apoptosis during Bacterial Infection.
Published in:
PLoS Pathogens, 2012, v. 8, n. 7, p. 1, doi. 10.1371/journal.ppat.1002814
By:
- Daigneault, Marc;
- De Silva, Thushan I.;
- Bewley, Martin A.;
- Preston, Julie A.;
- Marriott, Helen M.;
- Mitchell, Andrea M.;
- Mitchell, Timothy J.;
- Read, Robert C.;
- Whyte, Moira K. B.;
- Dockrell, David H.
Publication type:
Article
Prevalence of Panton-Valentine Leukocidin (PVL) and Antimicrobial Resistance in Community-Acquired Clinical Staphylococcus aureus in an Urban Gambian Hospital: A 11-Year Period Retrospective Pilot Study.
Published in:
Frontiers in Cellular & Infection Microbiology, 2019, v. 9, p. N.PAG, doi. 10.3389/fcimb.2019.00170
By:
- Darboe, Saffiatou;
- Dobreniecki, Sarah;
- Jarju, Sheikh;
- Jallow, Mamadou;
- Mohammed, Nuredin Ibrahim;
- Wathuo, Miriam;
- Ceesay, Buntung;
- Tweed, Sam;
- Basu Roy, Robindra;
- Okomo, Uduak;
- Kwambana-Adams, Brenda;
- Antonio, Martin;
- Bradbury, Richard S.;
- de Silva, Thushan I.;
- Forrest, Karen;
- Roca, Anna;
- Lawal, Bolarinde Joseph;
- Nwakanma, Davis;
- Secka, Ousman
Publication type:
Article
Genomic and Epidemiological Evidence of a Dominant Panton-Valentine Leucocidin-Positive Methicillin Resistant Staphylococcus aureus Lineage in Sri Lanka and Presence Among Isolates From the United Kingdom and Australia.
Published in:
Frontiers in Cellular & Infection Microbiology, 2019, v. 9, p. N.PAG, doi. 10.3389/fcimb.2019.00123
By:
- McTavish, Sharla M.;
- Snow, Sarah J.;
- Cook, Ellie C.;
- Pichon, Bruno;
- Coleman, Sarah;
- Coombs, Geoffrey W.;
- Pang, Stanley;
- Arias, Cesar A.;
- Díaz, Lorena;
- Boldock, Emma;
- Davies, Steve;
- Udukala, Mangala;
- Kearns, Angela Marie;
- Siribaddana, Sisira;
- de Silva, Thushan I.
Publication type:
Article
Molecular Epidemiology of Endemic Human T-Lymphotropic Virus Type 1 in a Rural Community in Guinea-Bissau.
Published in:
PLoS Neglected Tropical Diseases, 2012, v. 6, n. 6, p. 1, doi. 10.1371/journal.pntd.0001690
By:
- van Tienen, Carla;
- de Silva, Thushan I.;
- Alcantara, Luiz Carlos Junior;
- Onyango, Clayton O.;
- Jarju, Sheikh;
- Gonçalves, Nato;
- Vincent, Tim;
- Aaby, Peter;
- Whittle, Hilton;
- Schim van der Loeff, Maarten;
- Cotten, Matthew
Publication type:
Article
Molecular Epidemiology of Endemic Human T-Lymphotropic Virus Type 1 in a Rural Community in Guinea-Bissau.
Published in:
PLoS Neglected Tropical Diseases, 2012, v. 6, n. 6, p. 1, doi. 10.1371/journal.pntd.0001690
By:
- van Tienen, Carla;
- de Silva, Thushan I.;
- Junior Alcantara, Luiz Carlos;
- Onyango, Clayton O.;
- Jarju, Sheikh;
- Gonçalves, Nato;
- Vincent, Tim;
- Aaby, Peter;
- Whittle, Hilton;
- Loeff, Maarten Schim van der;
- Cotten, Matthew
Publication type:
Article
Impact of intra-partum azithromycin on carriage of group A streptococcus in the Gambia: a posthoc analysis of a double-blind randomized placebo-controlled trial.
Published in:
2022
By:
- Jagne, Isatou;
- Keeley, Alexander J.;
- Bojang, Abdoulie;
- Camara, Bully;
- Jallow, Edrissa;
- Senghore, Elina;
- Oluwalana, Claire;
- Bah, Saikou Y.;
- Turner, Claire E.;
- Sesay, Abdul Karim;
- D'Alessandro, Umberto;
- Bottomley, Christian;
- de Silva, Thushan I.;
- Roca, Anna
Publication type:
journal article
Streptococcus pyogenes Colonization in Children Aged 24–59 Months in the Gambia: Impact of Live Attenuated Influenza Vaccine and Associated Serological Responses.
Published in:
Journal of Infectious Diseases, 2023, v. 228, n. 7, p. 957, doi. 10.1093/infdis/jiad153
By:
- Keeley, Alexander J;
- Groves, Danielle;
- Armitage, Edwin P;
- Senghore, Elina;
- Jagne, Ya Jankey;
- Sallah, Hadijatou J;
- Drammeh, Sainabou;
- Angyal, Adri;
- Hornsby, Hailey;
- Crombrugghe, Gabrielle de;
- Smeesters, Pierre R;
- Rossi, Omar;
- Carducci, Martina;
- Peno, Chikondi;
- Bogaert, Debby;
- Kampmann, Beate;
- Marks, Michael;
- Shaw, Helen A;
- Turner, Claire R;
- Silva, Thushan I de
Publication type:
Article
Molecular epidemiology of endemic Human T-Lymphotropic virus 1 (HTLV-1) in a community in rural Guinea-Bissau.
Published in:
2011
By:
- van Tienen, Carla;
- de Silva, Thushan I.;
- Alcantara, Jr., Luiz C.;
- van der Loeff, Maarten Schim;
- Vincent, Tim;
- Gonçalves, Nato;
- Coutinho, Roel A.;
- Aaby, Peter;
- Whittle, Hilton;
- Cotten, Matthew
Publication type:
Abstract
Maternal proviral load and vertical transmission of Human T cell Lymphotropic Virus type 1 in Guinea-Bissau.
Published in:
2011
By:
- van Tienen, Carla;
- McConkey, Samuel J.;
- de Silva, Thushan I.;
- Cotten, Matthew;
- Kaye, Steve;
- Sarge-Njie, Ramu;
- da Costa, Carlos;
- Gonçalves, Nato;
- Parker, Julia;
- Vincent, Tim;
- Jaye, Assan;
- Aaby, Peter;
- Whittle, Hilton;
- van der Loeff, Maarten Schim
Publication type:
Abstract
HIV-1 subtype distribution in the Gambia and the significant presence of CRF49_cpx, a novel circulating recombinant form.
Published in:
Retrovirology, 2010, v. 7, p. 82, doi. 10.1186/1742-4690-7-82
By:
- de Silva, Thushan I.;
- Turner, Roxanne;
- Hué, Stéphane;
- Trikha, Roochi;
- van Tienen, Carla;
- Onyango, Clayton;
- Jaye, Assan;
- Foley, Brian;
- Whittle, Hilton;
- Rowland-Jones, Sarah L.;
- Cotton, Matthew
Publication type:
Article

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