Works by de Hollander, Mattias

Results: 18

Repeated exposure of wheat to the fungal root pathogen Bipolaris sorokiniana modulates rhizosphere microbiome assembly and disease suppressiveness.

Published in:

Environmental Microbiome, 2023, v. 18, n. 1, p. 1, doi. 10.1186/s40793-023-00529-2

By:

Costa, Lilian S. Abreu Soares;
de Faria, Mírian Rabelo;
Chiaramonte, Josiane Barros;
Mendes, Lucas W.;
Sepo, Edis;
de Hollander, Mattias;
Fernandes, José Maurício Cunha;
Carrión, Víctor J.;
Bettiol, Wagner;
Mauchline, Tim H.;
Raaijmakers, Jos M.;
Mendes, Rodrigo

Publication type:

Article

Impact of the fungal pathogen Fusarium oxysporum on the taxonomic and functional diversity of the common bean root microbiome.

Published in:

Environmental Microbiome, 2023, v. 18, n. 1, p. 1, doi. 10.1186/s40793-023-00524-7

By:

Mendes, Lucas William;
Raaijmakers, Jos M;
de Hollander, Mattias;
Sepo, Edis;
Gómez Expósito, Ruth;
Chiorato, Alisson Fernando;
Mendes, Rodrigo;
Tsai, Siu Mui;
Carrión, Victor J

Publication type:

Article

Context dependency and saturating effects of loss of rare soil microbes on plant productivity.

Published in:

Frontiers in Plant Science, 2015, p. 1, doi. 10.3389/fpls.2015.00485

By:

Hol, W. H. Gera;
de Boer, Wietse;
de Hollander, Mattias;
Kuramae, Eiko E.;
Meisner, Annelein;
van der Putten, Wim H.

Publication type:

Article

Cultivation-independent and cultivation-dependent metagenomes reveal genetic and enzymatic potential of microbial community involved in the degradation of a complex microbial polymer.

Published in:

Microbiome, 2020, v. 8, n. 1, p. 1, doi. 10.1186/s40168-020-00836-7

By:

Costa, Ohana Y. A.;
de Hollander, Mattias;
Pijl, Agata;
Liu, Binbin;
Kuramae, Eiko E.

Publication type:

Article

Deciphering rhizosphere microbiome assembly of wild and modern common bean (Phaseolus vulgaris) in native and agricultural soils from Colombia.

Published in:

Microbiome, 2019, v. 7, n. 1, p. N.PAG, doi. 10.1186/s40168-019-0727-1

By:

Pérez-Jaramillo, Juan E.;
de Hollander, Mattias;
Ramírez, Camilo A.;
Mendes, Rodrigo;
Raaijmakers, Jos M.;
Carrión, Víctor J.

Publication type:

Article

The wild side of plant microbiomes.

Published in:

Microbiome, 2018, v. 6, n. 1, p. N.PAG, doi. 10.1186/s40168-018-0519-z

By:

Pérez-Jaramillo, Juan E.;
Carrión, Víctor J.;
de Hollander, Mattias;
Raaijmakers, Jos M.

Publication type:

Article

Soil Microbiome Is More Heterogeneous in Organic Than in Conventional Farming System.

Published in:

Frontiers in Microbiology, 2017, v. 7, p. 1, doi. 10.3389/fmicb.2016.02064

By:

Lupatini, Manoeli;
Korthals, Gerard W.;
de Hollander, Mattias;
Janssens, Thierry K. S.;
Kuramae, Eiko E.

Publication type:

Article

Quantitative comparison between the rhizosphere effect of Arabidopsis thaliana and co-occurring plant species with a longer life history.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2020, v. 14, n. 10, p. 2433, doi. 10.1038/s41396-020-0695-2

By:

Schneijderberg, Martinus;
Cheng, Xu;
Franken, Carolien;
de Hollander, Mattias;
van Velzen, Robin;
Schmitz, Lucas;
Heinen, Robin;
Geurts, Rene;
van der Putten, Wim H.;
Bezemer, T. Martijn;
Bisseling, Ton

Publication type:

Article

Influence of resistance breeding in common bean on rhizosphere microbiome composition and function.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2018, v. 12, n. 1, p. 212, doi. 10.1038/ismej.2017.158

By:

Mendes, Lucas William;
Raaijmakers, Jos M;
de Hollander, Mattias;
Mendes, Rodrigo;
Tsai, Siu Mui

Publication type:

Article

Shifts in rhizosphere fungal community during secondary succession following abandonment from agriculture.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2017, v. 11, n. 10, p. 2294, doi. 10.1038/ismej.2017.90

By:

Hannula, S Emilia;
Morriën, Elly;
de Hollander, Mattias;
van der Putten, Wim H;
van Veen, Johannes A;
de Boer, Wietse

Publication type:

Article

Linking rhizosphere microbiome composition of wild and domesticated Phaseolus vulgaris to genotypic and root phenotypic traits.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2017, v. 11, n. 10, p. 2244, doi. 10.1038/ismej.2017.85

By:

Pérez-Jaramillo, Juan E;
Carrión, Víctor J;
Bosse, Mirte;
Ferrão, Luiz F V;
de Hollander, Mattias;
Garcia, Antonio A F;
Ramírez, Camilo A;
Mendes, Rodrigo;
Raaijmakers, Jos M

Publication type:

Article

Functional traits dominate the diversity-related selection of bacterial communities in the rhizosphere.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2017, v. 11, n. 1, p. 56, doi. 10.1038/ismej.2016.108

By:

Yan, Yan;
Kuramae, Eiko E;
de Hollander, Mattias;
Klinkhamer, Peter G L;
van Veen, Johannes A

Publication type:

Article

Soil networks become more connected and take up more carbon as nature restoration progresses.

Published in:

Nature Communications, 2017, v. 8, n. 2, p. 14349, doi. 10.1038/ncomms14349

By:

Morriën, Elly;
Hannula, S. Emilia;
Snoek, L. Basten;
Helmsing, Nico R.;
Zweers, Hans;
de Hollander, Mattias;
Soto, Raquel Luján;
Bouffaud, Marie-Lara;
Buée, Marc;
Dimmers, Wim;
Duyts, Henk;
Geisen, Stefan;
Girlanda, Mariangela;
Griffiths, Rob I.;
Jørgensen, Helene-Bracht;
Jensen, John;
Plassart, Pierre;
Redecker, Dirk;
Schmelz, Rűdiger M;
Schmidt, Olaf

Publication type:

Article

Tracking Fungal Community Responses to Maize Plants by DNA- and RNA-Based Pyrosequencing.

Published in:

PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0069973

By:

Kuramae, Eiko E.;
Verbruggen, Erik;
Hillekens, Remy;
de Hollander, Mattias;
Röling, Wilfred F. M.;
van der Heijden, Marcel G. A.;
Kowalchuk, George A.

Publication type:

Article

A Comparison of rpoB and 16S rRNA as Markers in Pyrosequencing Studies of Bacterial Diversity.

Published in:

PLoS ONE, 2012, v. 7, n. 2, p. 1, doi. 10.1371/journal.pone.0030600

By:

Vos, Michiel;
Quince, Christopher;
Pijl, Agata S.;
Hollander, Mattias de;
Kowalchuk, George A.

Publication type:

Article

PhyloFunDB: A Pipeline to Create and Update Functional Gene Taxonomic Databases.

Published in:

Microorganisms, 2022, v. 10, n. 6, p. 1093, doi. 10.3390/microorganisms10061093

By:

Costa, Ohana Y. A.;
de Hollander, Mattias;
Kuramae, Eiko E.;
Bodelier, Paul L. E.

Publication type:

Article

Plant and soil fungal but not soil bacterial communities are linked in long-term fertilized grassland.

Published in:

Scientific Reports, 2016, p. 23680, doi. 10.1038/srep23680

By:

Cassman, Noriko A.;
Leite, Marcio F. A.;
Pan, Yao;
de Hollander, Mattias;
van Veen, Johannes A.;
Kuramae, Eiko E.

Publication type:

Article

Can subtle changes in gene expression be consistently detected with different microarray platforms?

Published in:

BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-124

By:

Pedotti, Paola;
't Hoen, Peter A. C.;
Vreugdenhil, Erno;
Schenk, Geert J.;
Vossen, Rolf H. A. M.;
Ariyurek, Yavuz;
de Hollander, Mattias;
Kuiper, Rowan;
van Ommen, Gertjan J. B.;
den Dunnen, Johan T.;
Boer, Judith M.;
de Menezes, Renée X.

Publication type:

Article