Works by de Beer, Dirk

Results: 115

Dust storms over the Arabian Gulf: a possible indicator of climate changes consequences.
Published in:
Aquatic Ecosystem Health & Management, 2011, v. 14, n. 3, p. 260, doi. 10.1080/14634988.2011.601274
By:
- Hamza, Waleed;
- Enan, MohamedRizk;
- Al-Hassini, Huda;
- Stuut, Jan-Berend;
- de-Beer, Dirk
Publication type:
Article
Hydrogen Dynamics in Trichodesmium Colonies and Their Potential Role in Mineral Iron Acquisition.
Published in:
Frontiers in Microbiology, 2019, p. 1, doi. 10.3389/fmicb.2019.01565
By:
- Eichner, Meri;
- Basu, Subhajit;
- Gledhill, Martha;
- de Beer, Dirk;
- Shaked, Yeala
Publication type:
Article
Role of Extracellular Carbonic Anhydrase in Dissolved Inorganic Carbon Uptake in Alkaliphilic Phototrophic Biofilm.
Published in:
Frontiers in Microbiology, 2018, p. N.PAG, doi. 10.3389/fmicb.2018.02490
By:
- Li, Tong;
- Sharp, Christine E.;
- Ataeian, Maryam;
- Strous, Marc;
- de Beer, Dirk
Publication type:
Article
Effect of nitrite and nitrate on in situ sulfide production in an activated sludge immobilized agar gel film as determined by use of microelectrodes.
Published in:
Biotechnology & Bioengineering, 2003, v. 81, n. 5, p. 570, doi. 10.1002/bit.10495
By:
- Okabe, Satoshi;
- Santegoeds, Cecilia M.;
- De Beer, Dirk
Publication type:
Article
Successional development of sulfate-reducing bacterial populations and their activities in an activated sludge immobilized agar gel film.
Published in:
Biotechnology & Bioengineering, 2002, v. 78, n. 2, p. 119, doi. 10.1002/bit.10240
By:
- Okabe, Satoshi;
- Santegoeds, Cecilia M.;
- Watanabe, Yoshimasa;
- Beer, Dirk de
Publication type:
Article
Nitrite-driven anaerobic methane oxidation by oxygenic bacteria.
Published in:
Nature, 2010, v. 464, n. 7288, p. 543, doi. 10.1038/nature08883
By:
- Ettwig, Katharina F.;
- Butler, Margaret K.;
- Le Paslier, Denis;
- Pelletier, Eric;
- Mangenot, Sophie;
- Kuypers, Marcel M. M.;
- Schreiber, Frank;
- Dutilh, Bas E.;
- Zedelius, Johannes;
- de Beer, Dirk;
- Gloerich, Jolein;
- Wessels, Hans J. C. T.;
- van Alen, Theo;
- Luesken, Francisca;
- Wu, Ming L.;
- van de Pas-Schoonen, Katinka T.;
- Op den Camp, Huub J. M.;
- Janssen-Megens, Eva M.;
- Francoijs, Kees-Jan;
- Stunnenberg, Henk
Publication type:
Article
Novel microbial communities of the Haakon Mosby mud volcano and their role as a methane sink.
Published in:
2006
By:
- Niemann, Helge;
- Lösekann, Tina;
- de Beer, Dirk;
- Elvert, Marcus;
- Nadalig, Thierry;
- Knittel, Katrin;
- Amann, Rudolf;
- Sauter, Eberhard J.;
- Schlüter, Michael;
- Klages, Michael;
- Foucher, Jean Paul;
- Boetius, Antje
Publication type:
Letter
Colonies of marine cyanobacteria Trichodesmium interact with associated bacteria to acquire iron from dust.
Published in:
Communications Biology, 2019, v. 2, n. 1, p. N.PAG, doi. 10.1038/s42003-019-0534-z
By:
- Basu, Subhajit;
- Gledhill, Martha;
- de Beer, Dirk;
- Prabhu Matondkar, S. G.;
- Shaked, Yeala
Publication type:
Article
Nutritive effect of dust on microbial biodiversity and productivity of the Arabian Gulf.
Published in:
Aquatic Ecosystem Health & Management, 2020, v. 23, n. 2, p. 122, doi. 10.1080/14634988.2019.1676541
By:
- Al-Najjar, Mohammad A. A.;
- Munday, Christopher;
- Fink, Artur;
- Abdel-Moati, Mohamed A.R.;
- Hamza, Waleed;
- Korte, Laura;
- Stuut, Jan-Berend;
- Al-Ansari, Ibrahim S.;
- Al-Maslamani, Ibrahim;
- de Beer, Dirk
Publication type:
Article
Impacts of Warming and Acidification on Coral Calcification Linked to Photosymbiont Loss and Deregulation of Calcifying Fluid pH.
Published in:
Journal of Marine Science & Engineering, 2022, v. 10, n. 8, p. 1106, doi. 10.3390/jmse10081106
By:
- Cameron, Louise P.;
- Reymond, Claire E.;
- Bijma, Jelle;
- Büscher, Janina V.;
- De Beer, Dirk;
- Guillermic, Maxence;
- Eagle, Robert A.;
- Gunnell, John;
- Müller-Lundin, Fiona;
- Schmidt-Grieb, Gertraud M.;
- Westfield, Isaac;
- Westphal, Hildegard;
- Ries, Justin B.
Publication type:
Article
Planktonic Aggregates as Hotspots for Heterotrophic Diazotrophy: The Plot Thickens.
Published in:
Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.875050
By:
- Riemann, Lasse;
- Rahav, Eyal;
- Passow, Uta;
- Grossart, Hans-Peter;
- de Beer, Dirk;
- Klawonn, Isabell;
- Eichner, Meri;
- Benavides, Mar;
- Bar-Zeev, Edo
Publication type:
Article
Advection Drives Nitrate Past the Microphytobenthos in Intertidal Sands, Fueling Deeper Denitrification.
Published in:
Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.556268
By:
- Schutte, Charles A.;
- Huanca-Valenzuela, Paulina;
- Lavik, Gaute;
- Marchant, Hannah K.;
- de Beer, Dirk
Publication type:
Article
Longitudinal Telomere Erosion in Lymphocyte Subsets of Patients with Atherosclerotic Peripheral Arterial Disease (PAD).
Published in:
Journal of Clinical & Diagnostic Research, 2015, v. 9, n. 3, p. 1, doi. 10.7860/JCDR/2015/10931.5684
By:
- DE BEER, DIRK;
- VÖLZMANN, JAN;
- KALKA, CHRISTOPH;
- BAERLOCHER, GABRIELA M.
Publication type:
Article
Measurement of local diffusion coefficients in biofilms by microinjection and confocal microscopy.
Published in:
Biotechnology & Bioengineering, 1997, v. 53, n. 2, p. 151, doi. 10.1002/(SICI)1097-0290(19970120)53:2<151::AID-BIT4>3.0.CO;2-N
By:
- de Beer, Dirk;
- Stoodley, Paul;
- Lewandowski, Zbigniew
Publication type:
Article
Liquid flow in heterogeneous biofilms.
Published in:
Biotechnology & Bioengineering, 1994, v. 44, n. 5, p. 636, doi. 10.1002/bit.260440510
By:
- de Beer, Dirk;
- Stoodley, Paul;
- Lewandowski, Zbigniew
Publication type:
Article
Effects of biofilm structures on oxygen distribution and mass transport.
Published in:
Biotechnology & Bioengineering, 1994, v. 43, n. 11, p. 1131, doi. 10.1002/bit.260431118
By:
- de Beer, Dirk;
- Stoodley, Paul;
- Roe, Frank;
- Lewandowski, Zbigniew
Publication type:
Article
Degradation of petroleum model compounds immobilized on clay by a hypersaline microbial mat.
Published in:
Biodegradation, 2002, v. 13, n. 4, p. 273, doi. 10.1023/A:1021263009377
By:
- Grötzschel, Stefan;
- Köster, Jürgen;
- Abed, Raeid;
- de Beer, Dirk
Publication type:
Article
Microsensors as a tool to determine chemical microgradients and bacterial activity in wastewater biofilms and flocs
Published in:
Biodegradation, 1998, v. 9, n. 3/4, p. 159
By:
- Schramm, Andreas;
- de Beer, Dirk;
- Santegoeds, Cecilia M.
Publication type:
Article
Aerobic denitrification in permeable Wadden Sea sediments.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2011, v. 5, n. 4, p. 776, doi. 10.1038/ismej.2010.166
By:
- Gao, Hang;
- Schreiber, Frank;
- Collins, Gavin;
- Jensen, Marlene M;
- Kostka, Joel E;
- Lavik, Gaute;
- de Beer, Dirk;
- Zhou, Huai-yang;
- Kuypers, Marcel M M
Publication type:
Article
Novel observations of Thiobacterium, a sulfur-storing Gammaproteobacterium producing gelatinous mats.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2010, v. 4, n. 8, p. 1031, doi. 10.1038/ismej.2010.23
By:
- Grünke, Stefanie;
- Lichtschlag, Anna;
- Beer, Dirk de;
- Kuypers, Marcel;
- Lösekann-Behrens, Tina;
- Ramette, Alban;
- Boetius, Antje
Publication type:
Article
Conversion and conservation of light energy in a photosynthetic microbial mat ecosystem.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2010, v. 4, n. 3, p. 440, doi. 10.1038/ismej.2009.121
By:
- Al-Najjar, Mohammad A. A.;
- de Beer, Dirk;
- Jørgensen, Bo Barker;
- Kühl, Michael;
- Polerecky, Lubos
Publication type:
Article
Aerobic denitrification in permeable Wadden Sea sediments.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2010, v. 4, n. 3, p. 417, doi. 10.1038/ismej.2009.127
By:
- Hang Gao;
- Schreiber, Frank;
- Collins, Gavin;
- Jensen, Marlene M.;
- Kostka, Joel E.;
- Lavik, Gaute;
- de Beer, Dirk;
- Huai-yang Zhou;
- Kuypers, Marcel M. M.
Publication type:
Article
Mechanisms of transient nitric oxide and nitrous oxide production in a complex biofilm.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2009, v. 3, n. 11, p. 1301, doi. 10.1038/ismej.2009.55
By:
- Schreiber, Frank;
- Loeffler, Birte;
- Polerecky, Lubos;
- Kuypers, Marcel M. M.;
- De Beer, Dirk
Publication type:
Article
Biological and chemical sulfide oxidation in a Beggiatoa inhabited marine sediment.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2007, v. 1, n. 4, p. 341, doi. 10.1038/ismej.2007.50
By:
- Preisler, André;
- de Beer, Dirk;
- Lichtschlag, Anna;
- Lavik, Gaute;
- Boetius, Antje;
- Jørgensen, Bo Barker
Publication type:
Article
The Ellrott grab: A small, lightweight sediment sampler for collecting undisturbed sandy sediments.
Published in:
Limnology & Oceanography, Methods, 2024, v. 22, n. 3, p. 159, doi. 10.1002/lom3.10598
By:
- Moncada, Chyrene;
- Ellrott, Andreas;
- de Beer, Dirk;
- Amann, Rudolf;
- Knittel, Katrin
Publication type:
Article
Significantly shorter telomeres in T-cells of patients with ZAP-70+/CD38+ chronic lymphocytic leukaemia.
Published in:
British Journal of Haematology, 2008, v. 143, n. 3, p. 383, doi. 10.1111/j.1365-2141.2008.07363.x
By:
- Röth, Alexander;
- de Beer, Dirk;
- Nückel, Holger;
- Sellmann, Ludger;
- Dührsen, Ulrich;
- Dürig, Jan;
- Baerlocher, Gabriela M.
Publication type:
Article
Denitrification in human dental plaque.
Published in:
BMC Biology, 2010, v. 8, p. 24, doi. 10.1186/1741-7007-8-24
By:
- Schreiber, Frank;
- Stief, Peter;
- Gieseke, Armin;
- Heisterkamp, Ines M.;
- Verstraete, Willy;
- de Beer, Dirk;
- Stoodley, Paul
Publication type:
Article
A comparative experimental and multiphysics computational fluid dynamics study of coupled surface-subsurface flow in bed forms.
Published in:
Water Resources Research, 2012, v. 48, n. 8, p. 1, doi. 10.1029/2012WR011982
By:
- Janssen, Felix;
- Cardenas, M. Bayani;
- Sawyer, Audrey H.;
- Dammrich, Thea;
- Krietsch, Jana;
- de Beer, Dirk
Publication type:
Article
Insights into the Genome of Large Sulfur Bacteria Revealed by Analysis of Single Filaments.
Published in:
PLoS Biology, 2007, v. 5, n. 9, p. e230, doi. 10.1371/journal.pbio.0050230
By:
- Mußmann, Marc;
- Hu, Fen Z.;
- Richter, Michael;
- de Beer, Dirk;
- Preisler, André;
- Jørgensen, Bo B.;
- Huntemann, Marcel;
- Glöckner, Frank Oliver;
- Amann, Rudolf;
- Koopman, Werner J. H.;
- Lasken, Roger S.;
- Janto, Benjamin;
- Hogg, Justin;
- Stoodley, Paul;
- Boissy, Robert;
- Ehrlich, Garth D.
Publication type:
Article
Effect of sulfate on low-temperature anaerobic digestion.
Published in:
Frontiers in Microbiology, 2014, v. 5, p. 1, doi. 10.3389/fmicb.2014.00376
By:
- Madden, Pádhraig;
- Al-Raei, Abdul M.;
- Enright, Anne M.;
- Chinalia, Fabio A.;
- de Beer, Dirk;
- O'Flaherty, Vincent;
- Collins, Gavin
Publication type:
Article
Evidence for fungal and chemodenitrification based N2O flux from nitrogen impacted coastal sediments.
Published in:
Nature Communications, 2017, v. 8, n. 6, p. 15595, doi. 10.1038/ncomms15595
By:
- Wankel, Scott D.;
- Ziebis, Wiebke;
- Buchwald, Carolyn;
- Charoenpong, Chawalit;
- de Beer, Dirk;
- Dentinger, Jane;
- Xu, Zhenjiang;
- Zengler, Karsten
Publication type:
Article
Eruption of a deep-sea mud volcano triggers rapid sediment movement.
Published in:
Nature Communications, 2014, v. 5, n. 11, p. 5385, doi. 10.1038/ncomms6385
By:
- Feseker, Tomas;
- Boetius, Antje;
- Wenzhöfer, Frank;
- Blandin, Jerome;
- Olu, Karine;
- Yoerger, Dana R.;
- Camilli, Richard;
- German, Christopher R.;
- de Beer, Dirk
Publication type:
Article
Biotic Control of Surface pH and Evidence of Light-Induced H+ Pumping and Ca2+-H+ Exchange in a Tropical Crustose Coralline Alga.
Published in:
PLoS ONE, 2016, v. 11, n. 7, p. 1, doi. 10.1371/journal.pone.0159057
By:
- Hofmann, Laurie C.;
- Koch, Marguerite;
- de Beer, Dirk
Publication type:
Article
Effects of Bioadvection by Arenicola marina on Microphytobenthos in Permeable Sediments.
Published in:
PLoS ONE, 2015, v. 10, n. 7, p. 1, doi. 10.1371/journal.pone.0134236
By:
- Chennu, Arjun;
- Volkenborn, Nils;
- de Beer, Dirk;
- Wethey, David S.;
- Woodin, Sarah A.;
- Polerecky, Lubos
Publication type:
Article
Organic Matter Degradation Drives Benthic Cyanobacterial Mat Abundance on Caribbean Coral Reefs.
Published in:
PLoS ONE, 2015, v. 10, n. 5, p. 1, doi. 10.1371/journal.pone.0125445
By:
- Brocke, Hannah J.;
- Polerecky, Lubos;
- de Beer, Dirk;
- Weber, Miriam;
- Claudet, Joachim;
- Nugues, Maggy M.
Publication type:
Article
Dissimilatory nitrate reduction by Aspergillus terreus isolated from the seasonal oxygen minimum zone in the Arabian Sea.
Published in:
BMC Microbiology, 2014, v. 14, n. 1, p. 1, doi. 10.1186/1471-2180-14-35
By:
- Stief, Peter;
- Fuchs-Ocklenburg, Silvia;
- Kamp, Anja;
- Manohar, Cathrine-Sumathi;
- Houbraken, Jos;
- Boekhout, Teun;
- de Beer, Dirk;
- Stoeck, Thorsten
Publication type:
Article
The role of nitric-oxide-synthase-derived nitric oxide in multicellular traits of Bacillus subtilis 3610: biofilm formation, swarming, and dispersal.
Published in:
BMC Microbiology, 2011, v. 11, n. 1, p. 111, doi. 10.1186/1471-2180-11-111
By:
- Schreiber, Frank;
- Beutler, Martin;
- Enning, Dennis;
- Lamprecht-Grandio, María;
- Zafra, Olga;
- González-Pastor, José Eduardo;
- Beer, Dirk de
Publication type:
Article
High temporal resolution of hydrogen peroxide (H2O2) dynamics during heat stress does not support a causative role in coral bleaching.
Published in:
Coral Reefs, 2024, v. 43, n. 1, p. 119, doi. 10.1007/s00338-023-02448-7
By:
- Schlotheuber, Marlen;
- Voolstra, Christian R.;
- de Beer, Dirk;
- Camp, Emma F.;
- Klatt, Judith M.;
- Ghilardi, Mattia;
- Neumüller, Katharina;
- Ousley, Sara;
- Bejarano, Sonia
Publication type:
Article
Nitrogen fixation and diversity of benthic cyanobacterial mats on coral reefs in Curaçao.
Published in:
Coral Reefs, 2018, v. 37, n. 3, p. 861, doi. 10.1007/s00338-018-1713-y
By:
- Haan, Joost den;
- de Beer, Dirk;
- Brocke, Hannah J.;
- Piltz, Bastian;
- Herz, Nicole;
- Nugues, Maggy M.;
- Abed, Raeid M. M.;
- Palinska, Katarzyna A.;
- John, Uwe
Publication type:
Article
Nitrate respiration occurs throughout the depth of mucoid and non-mucoid Pseudomonas aeruginosa submerged agar colony biofilms including the oxic zone.
Published in:
Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-11957-4
By:
- Schwermer, Carsten Ulrich;
- de Beer, Dirk;
- Stoodley, Paul
Publication type:
Article
Author Correction: Calcification in free‑living coralline algae is strongly influenced by morphology: Implications for susceptibility to ocean acidification.
Published in:
2021
By:
- Schubert, Nadine;
- Hofmann, Laurie C.;
- Almeida Saá, Antonella C.;
- Moreira, Anderson Camargo;
- Arenhart, Rafael Güntzel;
- Fernandes, Celso Peres;
- de Beer, Dirk;
- Horta, Paulo A.;
- Silva, João
Publication type:
Correction Notice
Arctic Coralline Algae Elevate Surface pH and Carbonate in the Dark.
Published in:
Frontiers in Plant Science, 2018, p. N.PAG, doi. 10.3389/fpls.2018.01416
By:
- Hofmann, Laurie C.;
- Schoenrock, Kathryn;
- de Beer, Dirk
Publication type:
Article
Cyanobacteria in Sulfidic Spring Microbial Mats Can Perform Oxygenic and Anoxygenic Photosynthesis Simultaneously during an Entire Diurnal Period.
Published in:
Frontiers in Microbiology, 2016, v. 7, p. 1, doi. 10.3389/fmicb.2016.01973
By:
- Klatt, Judith M.;
- de Beer, Dirk;
- Häusler, Stefan;
- Polerecky, Lubos
Publication type:
Article
The Guaymas Basin Hiking Guide to Hydrothermal Mounds, Chimneys, and Microbial Mats: Complex Seafloor Expressions of Subsurface Hydrothermal Circulation.
Published in:
Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00075
By:
- Teske, Andreas;
- de Beer, Dirk;
- McKay, Luke J.;
- Tivey, Margaret K.;
- Biddle, Jennifer F.;
- Hoer, Daniel;
- Lloyd, Karen G.;
- Lever, Mark A.;
- Røy, Hans;
- Albert, Daniel B.;
- Mendlovitz, Howard P.;
- MacGregor, Barbara J.;
- Holden, James F.;
- Becker, Keir
Publication type:
Article
Oxygenic photosynthesis as a protection mechanism for cyanobacteria against iron-encrustation in environments with high Fe2+ concentrations.
Published in:
Frontiers in Microbiology, 2014, v. 5, p. 1, doi. 10.3389/fmicb.2014.00459
By:
- Buchmann, Bettina;
- Häusler, Stefan;
- de Beer, Dirk;
- Ionescu, Danny;
- Polerecky, Lubos;
- Heim, Christine
Publication type:
Article
Microbial activities in the burrow environment of the potamal mayfly Ephoron virgo.
Published in:
Freshwater Biology, 2004, v. 49, n. 9, p. 1152, doi. 10.1111/j.1365-2427.2004.01258.x
By:
- Stief, Peter;
- Altmann, Dörte;
- de Beer, Dirk;
- Bieg, Rosita;
- Kureck, Armin
Publication type:
Article
A fast-responding CO2 microelectrode for profiling sediments, microbial mats, and biofilms.
Published in:
Limnology & Oceanography, 1997, v. 42, n. 7, p. 1590, doi. 10.4319/lo.1997.42.7.1590
By:
- de Beer, Dirk;
- Glud, Anni;
- Epping, Eric;
- Kûhl, Michael
Publication type:
Article
Microsensor for radioactivity.
Published in:
Journal of Labelled Compounds & Radiopharmaceuticals, 2007, v. 50, n. 5/6, p. 492, doi. 10.1002/jlcr.1215
By:
- Filthuth, Heinz;
- Eickert, Gabriele;
- Färber, Paul;
- Jonkers, Henk;
- Polerecky, Lubos;
- de Beer, Dirk
Publication type:
Article
Functioning of intertidal flats inferred from temporal and spatial dynamics of O2, H2S and pH in their surface sediment.
Published in:
Ocean Dynamics, 2009, v. 59, n. 2, p. 317, doi. 10.1007/s10236-009-0179-4
By:
- Jansen, Stefan;
- Walpersdorf, Eva;
- Werner, Ursula;
- Billerbeck, Markus;
- Böttcher, Michael F.;
- De Beer, Dirk
Publication type:
Article
A new tool for long-term studies of POM-bacteria interactions: overcoming the century-old Bottle Effect.
Published in:
Scientific Reports, 2015, p. 1, doi. 10.1038/srep14706
By:
- Ionescu, Danny;
- Bizic-Ionescu, Mina;
- Khalili, Arzhang;
- Malekmohammadi, Reza;
- Morad, Reza Mohammad;
- de Beer, Dirk;
- Grossart, Hans-Peter
Publication type:
Article