Found: 14
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Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4.
- Published in:
- Nature Biotechnology, 2023, v. 41, n. 11, p. 1633, doi. 10.1038/s41587-023-01688-w
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- Publication type:
- Article
Automated identification of sequence-tailored Cas9 proteins using massive metagenomic data.
- Published in:
- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-34213-9
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- Publication type:
- Article
Genomic diversity and ecology of human-associated Akkermansia species in the gut microbiome revealed by extensive metagenomic assembly.
- Published in:
- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02427-7
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- Article
Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3.
- Published in:
- eLife, 2021, p. 1, doi. 10.7554/eLife.65088
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- Publication type:
- Article
Strong oral plaque microbiome signatures for dental implant diseases identified by strain-resolution metagenomics.
- Published in:
- NPJ Biofilms & Microbiomes, 2020, v. 6, n. 1, p. N.PAG, doi. 10.1038/s41522-020-00155-7
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- Publication type:
- Article
Analysis of 1321 Eubacterium rectale genomes from metagenomes uncovers complex phylogeographic population structure and subspecies functional adaptations.
- Published in:
- Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-02042-y
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- Publication type:
- Article
Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-16366-7
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- Publication type:
- Article
Longitudinal survey of microbiome associated with particulate matter in a megacity.
- Published in:
- Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-01964-x
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- Publication type:
- Article
Microbial genomes from non-human primate gut metagenomes expand the primate-associated bacterial tree of life with over 1000 novel species.
- Published in:
- Genome Biology, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s13059-019-1923-9
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- Article
Detecting contamination in viromes using ViromeQC.
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- 2019
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- Publication type:
- Letter
Profiling microbial strains in urban environments using metagenomic sequencing data.
- Published in:
- Biology Direct, 2018, v. 13, n. 1, p. N.PAG, doi. 10.1186/s13062-018-0211-z
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- Publication type:
- Article
Unexplored diversity and strain-level structure of the skin microbiome associated with psoriasis.
- Published in:
- NPJ Biofilms & Microbiomes, 2017, v. 3, n. 1, p. N.PAG, doi. 10.1038/s41522-017-0022-5
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- Publication type:
- Article
Maternal inheritance of bifidobacterial communities and bifidophages in infants through vertical transmission.
- Published in:
- Microbiome, 2017, v. 5, p. 1, doi. 10.1186/s40168-017-0282-6
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- Publication type:
- Article
MetaMLST: multi-locus strain-level bacterial typing from metagenomic samples.
- Published in:
- Nucleic Acids Research, 2017, v. 45, n. 2, p. 1, doi. 10.1093/nar/gkw837
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- Publication type:
- Article