Works by Zhu, Qiyun

Results: 59
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    Optimizing sequencing protocols for leaderboard metagenomics by combining long and short reads.

    Published in:
    Genome Biology, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s13059-019-1834-9
    By:
    • Sanders, Jon G.;
    • Nurk, Sergey;
    • Salido, Rodolfo A.;
    • Minich, Jeremiah;
    • Xu, Zhenjiang Z.;
    • Zhu, Qiyun;
    • Martino, Cameron;
    • Fedarko, Marcus;
    • Arthur, Timothy D.;
    • Chen, Feng;
    • Boland, Brigid S.;
    • Humphrey, Greg C.;
    • Brennan, Caitriona;
    • Sanders, Karenina;
    • Gaffney, James;
    • Jepsen, Kristen;
    • Khosroheidari, Mahdieh;
    • Green, Cliff;
    • Liyanage, Marlon;
    • Dang, Jason W.
    Publication type:
    Article
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    On the probability of dinosaur fleas.

    Published in:
    BMC Evolutionary Biology, 2016, v. 16, p. 1, doi. 10.1186/s12862-015-0568-x
    By:
    • Dittmar, Katharina;
    • Qiyun Zhu;
    • Hastriter, Michael W.;
    • Whiting, Michael F.
    Publication type:
    Article
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    Candidate probiotic Lactiplantibacillus plantarum HNU082 rapidly and convergently evolves within human, mice, and zebrafish gut but differentially influences the resident microbiome.

    Published in:
    Microbiome, 2021, v. 9, n. 1, p. 1, doi. 10.1186/s40168-021-01102-0
    By:
    • Huang, Shi;
    • Jiang, Shuaiming;
    • Huo, Dongxue;
    • Allaband, Celeste;
    • Estaki, Mehrbod;
    • Cantu, Victor;
    • Belda-Ferre, Pedro;
    • Vázquez-Baeza, Yoshiki;
    • Zhu, Qiyun;
    • Ma, Chenchen;
    • Li, Congfa;
    • Zarrinpar, Amir;
    • Liu, Yang-Yu;
    • Knight, Rob;
    • Zhang, Jiachao
    Publication type:
    Article
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    Insight into the function and evolution of the Wood–Ljungdahl pathway in Actinobacteria.

    Published in:
    ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2021, v. 15, n. 10, p. 3005, doi. 10.1038/s41396-021-00935-9
    By:
    • Jiao, Jian-Yu;
    • Fu, Li;
    • Hua, Zheng-Shuang;
    • Liu, Lan;
    • Salam, Nimaichand;
    • Liu, Peng-Fei;
    • Lv, Ai-Ping;
    • Wu, Geng;
    • Xian, Wen-Dong;
    • Zhu, Qiyun;
    • Zhou, En-Min;
    • Fang, Bao-Zhu;
    • Oren, Aharon;
    • Hedlund, Brian P.;
    • Jiang, Hong-Chen;
    • Knight, Rob;
    • Cheng, Lei;
    • Li, Wen-Jun
    Publication type:
    Article
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    House dust metagenome and pulmonary function in a US farming population.

    Published in:
    Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01823-y
    By:
    • Lee, Mikyeong;
    • Kaul, Abhishek;
    • Ward, James M.;
    • Zhu, Qiyun;
    • Richards, Marie;
    • Wang, Ziyue;
    • González, Antonio;
    • Parks, Christine G.;
    • Beane Freeman, Laura E.;
    • Umbach, David M.;
    • Motsinger-Reif, Alison A.;
    • Knight, Rob;
    • London, Stephanie J.
    Publication type:
    Article
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    Metagenomics-Based, Strain-Level Analysis of Escherichia coli From a Time-Series of Microbiome Samples From a Crohn's Disease Patient.

    Published in:
    Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2018.02559
    By:
    • Xin Fang;
    • Monk, Jonathan M.;
    • Nurk, Sergey;
    • Akseshina, Margarita;
    • Qiyun Zhu;
    • Gemmell, Christopher;
    • Gianetto-Hill, Connor;
    • Leung, Nelly;
    • Szubin, Richard;
    • Sanders, Jon;
    • Beck, Paul L.;
    • Weizhong Li;
    • Sandborn, William J.;
    • Gray-Owen, Scott D.;
    • Knight, Rob;
    • Allen-Vercoe, Emma;
    • Palsson, Bernhard O.;
    • Smarr, Larry
    Publication type:
    Article
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    Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0.

    Published in:
    Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-16366-7
    By:
    • Asnicar, Francesco;
    • Thomas, Andrew Maltez;
    • Beghini, Francesco;
    • Mengoni, Claudia;
    • Manara, Serena;
    • Manghi, Paolo;
    • Zhu, Qiyun;
    • Bolzan, Mattia;
    • Cumbo, Fabio;
    • May, Uyen;
    • Sanders, Jon G.;
    • Zolfo, Moreno;
    • Kopylova, Evguenia;
    • Pasolli, Edoardo;
    • Knight, Rob;
    • Mirarab, Siavash;
    • Huttenhower, Curtis;
    • Segata, Nicola
    Publication type:
    Article
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    A Multi-Omics Characterization of the Natural Product Potential of Tropical Filamentous Marine Cyanobacteria.

    Published in:
    Marine Drugs, 2021, v. 19, n. 1, p. 20, doi. 10.3390/md19010020
    By:
    • Leão, Tiago;
    • Wang, Mingxun;
    • Moss, Nathan;
    • da Silva, Ricardo;
    • Sanders, Jon;
    • Nurk, Sergey;
    • Gurevich, Alexey;
    • Humphrey, Gregory;
    • Reher, Raphael;
    • Zhu, Qiyun;
    • Belda-Ferre, Pedro;
    • Glukhov, Evgenia;
    • Whitner, Syrena;
    • Alexander, Kelsey L.;
    • Rex, Robert;
    • Pevzner, Pavel;
    • Dorrestein, Pieter C.;
    • Knight, Rob;
    • Bandeira, Nuno;
    • Gerwick, William H.
    Publication type:
    Article
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