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A global DNA methylation and gene expression analysis of early human B-cell development reveals a demethylation signature and transcription factor network.
Published in:
Nucleic Acids Research, 2012, v. 40, n. 22, p. 11339, doi. 10.1093/nar/gks957
By:
- Lee, Seung-Tae;
- Xiao, Yuanyuan;
- Muench, Marcus O.;
- Xiao, Jianqiao;
- Fomin, Marina E.;
- Wiencke, John K.;
- Zheng, Shichun;
- Dou, Xiaoqin;
- de Smith, Adam;
- Chokkalingam, Anand;
- Buffler, Patricia;
- Ma, Xiaomei;
- Wiemels, Joseph L.
Publication type:
Article
Geomorphological site classification for the Fujian province.
Published in:
Earthquake Science, 2013, v. 26, n. 1, p. 49, doi. 10.1007/s11589-013-0003-6
By:
- Ke, Yao;
- Zheng, Shichun;
- Huang, Zhao;
- Wang, Shanxiong;
- Huang, Jiafang
Publication type:
Article
Variants near TERT and TERC influencing telomere length are associated with high-grade glioma risk.
Published in:
Nature Genetics, 2014, v. 46, n. 7, p. 731, doi. 10.1038/ng.3004
By:
- Walsh, Kyle M;
- Codd, Veryan;
- Smirnov, Ivan V;
- Rice, Terri;
- Decker, Paul A;
- Hansen, Helen M;
- Kollmeyer, Thomas;
- Kosel, Matthew L;
- Molinaro, Annette M;
- McCoy, Lucie S;
- Bracci, Paige M;
- Cabriga, Belinda S;
- Pekmezci, Melike;
- Zheng, Shichun;
- Wiemels, Joseph L;
- Pico, Alexander R;
- Tihan, Tarik;
- Berger, Mitchell S;
- Chang, Susan M;
- Prados, Michael D
Publication type:
Article
A low-frequency variant at 8q24.21 is strongly associated with risk of oligodendroglial tumors and astrocytomas with IDH1 or IDH2 mutation.
Published in:
Nature Genetics, 2012, v. 44, n. 10, p. 1122, doi. 10.1038/ng.2388
By:
- Jenkins, Robert B;
- Xiao, Yuanyuan;
- Sicotte, Hugues;
- Decker, Paul A;
- Kollmeyer, Thomas M;
- Hansen, Helen M;
- Kosel, Matthew L;
- Zheng, Shichun;
- Walsh, Kyle M;
- Rice, Terri;
- Bracci, Paige;
- McCoy, Lucie S;
- Smirnov, Ivan;
- Patoka, Joseph S;
- Hsuang, George;
- Wiemels, Joe L;
- Tihan, Tarik;
- Pico, Alexander R;
- Prados, Michael D;
- Chang, Susan M
Publication type:
Article
Cancer, genes, and catechol estrogen metabolites.
Published in:
2003
By:
- Mas, Sergi;
- Laso, Nuria;
- Lafuente, Maria Jose;
- Lafuente, Amalia;
- Molina, Rafael;
- Ballesta, Antonio;
- Shichun Zheng;
- Wiencke, John Kevin
Publication type:
Letter
Direct and Indirect Targets of the E2A-PBX1 Leukemia-Specific Fusion Protein.
Published in:
PLoS ONE, 2014, v. 9, n. 2, p. 1, doi. 10.1371/journal.pone.0087602
By:
- Diakos, Christofer;
- Xiao, Yuanyuan;
- Zheng, Shichun;
- Kager, Leo;
- Dworzak, Michael;
- Wiemels, Joseph L.
Publication type:
Article
Pyruvate Kinase M2 Expression, but Not Pyruvate Kinase Activity, Is Up-Regulated in a Grade-Specific Manner in Human Glioma.
Published in:
PLoS ONE, 2013, v. 8, n. 2, p. 1, doi. 10.1371/journal.pone.0057610
By:
- Mukherjee, Joydeep;
- Phillips, Joanna J.;
- Zheng, Shichun;
- Wiencke, John;
- Ronen, Sabrina M.;
- Pieper, Russell O.
Publication type:
Article
Identification of Methylated Genes Associated with Aggressive Bladder Cancer.
Published in:
PLoS ONE, 2010, v. 5, n. 8, p. 1, doi. 10.1371/journal.pone.0012334
By:
- Marsit, Carmen J.;
- Houseman, E. Andres;
- Christensen, Brock C.;
- Gagne, Luc;
- Wrensch, Margaret R.;
- Nelson, Heather H.;
- Wiemels, Joseph;
- Shichun Zheng;
- Wiencke, John K.;
- Andrew, Angeline S.;
- Schned, Alan R.;
- Karagas, Margaret R.;
- Kelsey, Karl T.
Publication type:
Article
The Pathways Study: a prospective study of breast cancer survivorship within Kaiser Permanente Northern California.
Published in:
2008
By:
- Kwan, Marilyn;
- Ambrosone, Christine;
- Lee, Marion;
- Barlow, Janice;
- Krathwohl, Sarah;
- Ergas, Isaac;
- Ashley, Christine;
- Bittner, Julie;
- Darbinian, Jeanne;
- Stronach, Keren;
- Caan, Bette;
- Davis, Warren;
- Kutner, Susan;
- Quesenberry, Charles;
- Somkin, Carol;
- Sternfeld, Barbara;
- Wiencke, John;
- Zheng, Shichun;
- Kushi, Lawrence;
- Kwan, Marilyn L
Publication type:
journal article
Model-based clustering of DNA methylation array data: a recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions.
Published in:
BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-365
By:
- Houseman, E. Andres;
- Christensen, Brock C.;
- Ru-Fang Yeh;
- Marsit, Carmen J.;
- Karagas, Margaret R.;
- Wrensch, Margaret;
- Nelson, Heather H.;
- Wiemels, Joseph;
- Shichun Zheng;
- Wiencke, John K.;
- Kelsey, Karl T.
Publication type:
Article
TELOMERE LENGTH VARIANTS ARE ASSOCIATED WITH HIGH-GRADE GLIOMA RISK: IDENTIFICATION OF A NOVEL GLIOMA RISK LOCUS BY GENOME-WIDE ASSOCIATION STUDY.
Published in:
Neuro-Oncology, 2014, v. 16, n. suppl_3, p. iii2
By:
- Walsh, Kyle M.;
- Codd, Veryan;
- Smirnov, Ivan V.;
- Rice, Terri;
- Decker, Paul A.;
- Hansen, Helen M.;
- Kollmeyer, Thomas;
- Kosel, Matthew L.;
- Molinaro, Annette M.;
- McCoy, Lucie S.;
- Bracci, Paige M.;
- Cabriga, Belinda S.;
- Pekmezci, Melike;
- Zheng, Shichun;
- Wiemels, Joseph L.;
- Pico, Alexander R.;
- Tihan, Tarik;
- Berger, Mitchell S.;
- Chang, Susan M.;
- Prados, Michael D.
Publication type:
Article
MUTATION-BASED MOLECULAR GLIOMA CLASSIFICATION: PREVALENCE AND ASSOCIATION WITH GERMLINE RISK SNPS.
Published in:
Neuro-Oncology, 2014, v. 16, n. suppl_3, p. iii1, doi. 10.1093/neuonc/nou206.3
By:
- Jenkins, Robert Brian;
- Decker, Paul;
- Kosel, Matt;
- Eckel-Passow, Jeanette;
- Walsh, Kyle M.;
- Smirnov, Ivan V.;
- Caron, Alissa;
- Kollmeyer, Tom;
- Rice, Terri;
- Hansen, Helen M.;
- Molinaro, Annette M.;
- McCoy, Lucie S.;
- Bracci, Paige M.;
- Cabriga, Belinda S.;
- Marshall, Roxanne;
- Pekmezci, Melike;
- Zheng, Shichun;
- O'Neill, Brian;
- Buckner, Jan;
- Giannini, Caterina
Publication type:
Article
SINGLE NUCLEOTIDE POLYMORPHISMS (SNPS) ASSOCIATED WITH GLIOMA SURVIVAL.
Published in:
Neuro-Oncology, 2014, v. 16, n. suppl_3, p. iii2, doi. 10.1093/neuonc/nou206.7
By:
- Wrensch, Margaret;
- Walsh, Kyle M.;
- Smirnov, Ivan V.;
- Rice, Terri;
- Hansen, Helen M.;
- Molinaro, Annette M.;
- McCoy, Lucie S.;
- Bracci, Paige M.;
- Cabriga, Belinda S.;
- Perry, Arie;
- Marshall, Roxanne;
- Pekmezci, Melike;
- Zheng, Shichun;
- Wiemels, Jospeh L.;
- Tihan, Tarik;
- Berger, Mitchell S.;
- Chang, Susan M.;
- Prados, Michael D.;
- Wiencke, John K.;
- Decker, Paul
Publication type:
Article
Genetic variants in telomerase-related genes are associated with an older age at diagnosis in glioma patients: evidence for distinct pathways of gliomagenesis.
Published in:
Neuro-Oncology, 2013, v. 15, n. 8, p. 1041, doi. 10.1093/neuonc/not051
By:
- Walsh, Kyle M.;
- Rice, Terri;
- Decker, Paul A.;
- Kosel, Matthew L.;
- Kollmeyer, Thomas;
- Hansen, Helen M.;
- Zheng, Shichun;
- McCoy, Lucie S.;
- Bracci, Paige M.;
- Anderson, Erik;
- Hsuang, George;
- Wiemels, Joe L.;
- Pico, Alexander R.;
- Smirnov, Ivan;
- Molinaro, Annette M.;
- Tihan, Tarik;
- Berger, Mitchell S.;
- Chang, Susan M.;
- Prados, Michael D.;
- Lachance, Daniel H.
Publication type:
Article
Inherited variant on chromosome 11q23 increases susceptibility to IDH-mutated but not IDH-normal gliomas regardless of grade or histology.
Published in:
Neuro-Oncology, 2013, v. 15, n. 5, p. 535, doi. 10.1093/neuonc/nos324
By:
- Rice, Terri;
- Zheng, Shichun;
- Decker, Paul A.;
- Walsh, Kyle M.;
- Bracci, Paige;
- Xiao, Yuanyuan;
- McCoy, Lucie S.;
- Smirnov, Ivan;
- Patoka, Joseph S.;
- Hansen, Helen M.;
- Hsuang, George;
- Wiemels, Joe L.;
- Tihan, Tarik;
- Pico, Alexander R.;
- Prados, Michael D.;
- Chang, Susan M.;
- Berger, Mitchel S.;
- Caron, Alissa;
- Fink, Stephanie;
- Kollmeyer, Thomas
Publication type:
Article
PTEN promoter methylation and activation of the PI3K/Akt/mTOR pathway in pediatric gliomas and influence on clinical outcome.
Published in:
Neuro-Oncology, 2012, v. 14, n. 9, p. 1146, doi. 10.1093/neuonc/nos140
By:
- Mueller, Sabine;
- Phillips, Joanna;
- Onar-Thomas, Arzu;
- Romero, Eloy;
- Zheng, Shichun;
- Wiencke, John K.;
- McBride, Sean M.;
- Cowdrey, Cynthia;
- Prados, Michael D.;
- Weiss, William A.;
- Berger, Mitchel S.;
- Gupta, Nalin;
- Haas-Kogan, Daphne A.
Publication type:
Article
DNA hypermethylation profiles associated with glioma subtypes and EZH2 and IGFBP2 mRNA expression.
Published in:
Neuro-Oncology, 2011, v. 13, n. 3, p. 280, doi. 10.1093/neuonc/noq190
By:
- Zheng, Shichun;
- Houseman, E. Andres;
- Morrison, Zachary;
- Wrensch, Margaret R.;
- Patoka, Joseph S.;
- Ramos, Christian;
- Haas-Kogan, Daphne A.;
- McBride, Sean;
- Marsit, Carmen J.;
- Christensen, Brock C.;
- Nelson, Heather H.;
- Stokoe, David;
- Wiemels, Joseph L.;
- Chang, Susan M.;
- Prados, Michael D.;
- Tihan, Tarik;
- Vandenberg, Scott R.;
- Kelsey, Karl T.;
- Berger, Mitchel S.;
- Wiencke, John K.
Publication type:
Article
Epigenetic profiling reveals etiologically distinct patterns of DNA methylation in head and neck squamous cell carcinoma.
Published in:
Carcinogenesis, 2009, v. 30, n. 3, p. 416, doi. 10.1093/carcin/bgp006
By:
- Carmen J. Marsit;
- Brock C. Christensen;
- E. Andres Houseman;
- Margaret R. Karagas;
- Margaret R. Wrensch;
- Ru-Fang Yeh;
- Heather H. Nelson;
- Joseph L. Wiemels;
- Shichun Zheng;
- Marshall R. Posner;
- Michael D. McClean;
- John K. Wiencke;
- Karl T. Kelsey
Publication type:
Article
Serum macrophage-derived chemokine/CCL22 levels are associated with glioma risk, CD4 T cell lymphopenia and survival time.
Published in:
International Journal of Cancer, 2015, v. 137, n. 4, p. 826, doi. 10.1002/ijc.29441
By:
- Zhou, Mi;
- Bracci, Paige M.;
- McCoy, Lucie S.;
- Hsuang, George;
- Wiemels, Joseph L.;
- Rice, Terri;
- Zheng, Shichun;
- Kelsey, Karl T.;
- Wrensch, Margaret R.;
- Wiencke, John K.
Publication type:
Article
Breast Cancer DNA Methylation Profiles Are Associated with Tumor Size and Alcohol and Folate Intake.
Published in:
PLoS Genetics, 2010, v. 6, n. 7, p. 1, doi. 10.1371/journal.pgen.1001043
By:
- Christensen, Brock C.;
- Kelsey, Karl T.;
- Shichun Zheng;
- Houseman, E. Andres;
- Marsit, Carmen J.;
- Wrensch, Margaret R.;
- Wiemels, Joseph L.;
- Nelson, Heather H.;
- Karagas, Margaret R.;
- Kushi, Lawrence H.;
- Kwan, Marilyn L.;
- Wiencke, John K.
Publication type:
Article
Aging and Environmental Exposures Alter Tissue-Specific DNA Methylation Dependent upon CpG Island Context.
Published in:
PLoS Genetics, 2009, v. 5, n. 8, p. 1, doi. 10.1371/journal.pgen.1000602
By:
- Christensen, Brock C.;
- Houseman, E. Andres;
- Marsit, Carmen J.;
- Shichun Zheng;
- Wrensch, Margaret R.;
- Wiemels, Joseph L.;
- Nelson, Heather H.;
- Karagas, Margaret R.;
- Padbury, James F.;
- Bueno, Raphael;
- Sugarbaker, David J.;
- Ru-Fang Yeh;
- Wiencke, John K.;
- Kelsey, Karl T.
Publication type:
Article
Activation of PI3K/mTOR pathway occurs in most adult low-grade gliomas and predicts patient survival.
Published in:
Journal of Neuro-Oncology, 2010, v. 97, n. 1, p. 33, doi. 10.1007/s11060-009-0004-4
By:
- McBride, Sean M.;
- Perez, Daniel A.;
- Mei-Yin Polley;
- Vandenberg, Scott R.;
- Smith, Justin S.;
- Shichun Zheng;
- Lamborn, Kathleen R.;
- Wiencke, John K.;
- Chang, Susan M.;
- Prados, Michael D.;
- Berger, Mitchel S.;
- Stokoe, David;
- Haas-Kogan, Daphne A.
Publication type:
Article
Analysis of 60 Reported Glioma Risk SNPs Replicates Published GWAS Findings but Fails to Replicate Associations From Published Candidate-Gene Studies.
Published in:
Genetic Epidemiology, 2013, v. 37, n. 2, p. 222, doi. 10.1002/gepi.21707
By:
- Walsh, Kyle M.;
- Anderson, Erik;
- Hansen, Helen M.;
- Decker, Paul A.;
- Kosel, Matt L.;
- Kollmeyer, Thomas;
- Rice, Terri;
- Zheng, Shichun;
- Xiao, Yuanyuan;
- Chang, Jeffrey S.;
- McCoy, Lucie S.;
- Bracci, Paige M.;
- Wiemels, Joe L.;
- Pico, Alexander R.;
- Smirnov, Ivan;
- Lachance, Daniel H.;
- Sicotte, Hugues;
- Eckel‐Passow, Jeanette E.;
- Wiencke, John K.;
- Jenkins, Robert B.
Publication type:
Article
DNA Methylation, Isocitrate Dehydrogenase Mutation, and Survival in Glioma.
Published in:
JNCI: Journal of the National Cancer Institute, 2011, v. 103, n. 2, p. 143, doi. 10.1093/jnci/djq497
By:
- Christensen, Brock C.;
- Smith, Ashley A.;
- Shichun Zheng;
- Koestler, Devin C.;
- Houseman, E. Andres;
- Marsit, Carmen J.;
- Wiemels, Joseph L.;
- Nelson, Heather H.;
- Karagas, Margaret R.;
- Wrensch, Margaret R.;
- Kelsey, Karl T.;
- Wiencke, John K.
Publication type:
Article
Photoplethysmography based psychological stress detection with pulse rate variability feature differences and elastic net.
Published in:
International Journal of Distributed Sensor Networks, 2018, v. 14, n. 9, p. 1, doi. 10.1177/1550147718803298
By:
- Fenghua Li;
- Peida Xu;
- Shichun Zheng;
- Wenfeng Chen;
- Yang Yan;
- Suo Lu;
- Zhengkui Liu
Publication type:
Article

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