Works matching AU Zühlke, Daniela

Results: 33

Assays to Study Enzymatic and Non-Enzymatic Protein Lysine Acetylation In Vitro.

Published in:

Current Protocols, 2021, v. 1, n. 11, p. 1, doi. 10.1002/cpz1.277

By:

Graf, Leonie G.;
Vogt, Robert;
Blasl, Anna-Theresa;
Chuan Qin;
Schulze, Sabrina;
Zühlke, Daniela;
Sievers, Susanne;
Lammers, Michael

Publication type:

Article

The long-chain flavodoxin FldX1 improves the biodegradation of 4-hydroxyphenylacetate and 3-hydroxyphenylacetate and counteracts the oxidative stress associated to aromatic catabolism in Paraburkholderia xenovorans.

Published in:

Biological Research, 2024, v. 57, n. 1, p. 1, doi. 10.1186/s40659-024-00491-4

By:

Rodríguez-Castro, Laura;
Durán, Roberto E.;
Méndez, Valentina;
Dorochesi, Flavia;
Zühlke, Daniela;
Riedel, Katharina;
Seeger, Michael

Publication type:

Article

Proteomic profiling of antibiotic‐resistant Escherichia coli GW‐AmxH19 isolated from hospital wastewater treated with physical plasma.

Published in:

Proteomics, 2024, v. 24, n. 19, p. 1, doi. 10.1002/pmic.202300494

By:

Hahn, Veronika;
Zühlke, Daniela;
Winter, Hauke;
Landskron, Annchristin;
Bernhardt, Jörg;
Sievers, Susanne;
Schmidt, Michael;
von Woedtke, Thomas;
Riedel, Katharina;
Kolb, Juergen F.

Publication type:

Article

<i>Aureolib</i> — A Proteome Signature Library: Towards an Understanding of <i>Staphylococcus aureus</i> Pathophysiology.

Published in:

PLoS ONE, 2013, v. 8, n. 8, p. 1, doi. 10.1371/journal.pone.0070669

By:

Fuchs, Stephan;
Zühlke, Daniela;
Pané-Farré, Jan;
Kusch, Harald;
Wolf, Carmen;
Reiß, Swantje;
Binh, Le Thi Nguyen;
Albrecht, Dirk;
Riedel, Katharina;
Hecker, Michael;
Engelmann, Susanne

Publication type:

Article

A Proteomic View of an Important Human Pathogen - Towards the Quantification of the Entire Staphylococcus aureus Proteome.

Published in:

PLoS ONE, 2009, v. 4, n. 12, p. 1, doi. 10.1371/journal.pone.0008176

By:

Becher, Dörte;
Hempel, Kristina;
Sievers, Susanne;
Zühlke, Daniela;
Pané-Farré, Jan;
Otto, Andreas;
Fuchs, Stephan;
Albrecht, Dirk;
Bernhardt, Jörg;
Engelmann, Susanne;
Völker, Uwe;
Maarten van Dijl, Jan;
Hecker, Michael

Publication type:

Article

The Lichens' Microbiota, Still a Mystery?

Published in:

Frontiers in Microbiology, 2021, v. 11, p. N.PAG, doi. 10.3389/fmicb.2021.623839

By:

Grimm, Maria;
Grube, Martin;
Schiefelbein, Ulf;
Zühlke, Daniela;
Bernhardt, Jörg;
Riedel, Katharina

Publication type:

Article

Molecular mechanisms underlying the close association between soil Burkholderia and fungi.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2016, v. 10, n. 1, p. 253, doi. 10.1038/ismej.2015.73

By:

Stopnisek, Nejc;
Zühlke, Daniela;
Carlier, Aurélien;
Barberán, Albert;
Fierer, Noah;
Becher, Dörte;
Riedel, Katharina;
Eberl, Leo;
Weisskopf, Laure

Publication type:

Article

Transformation of the drug ibuprofen by Priestia megaterium: reversible glycosylation and generation of hydroxylated metabolites.

Published in:

Environmental Science & Pollution Research, 2025, v. 32, n. 19, p. 11981, doi. 10.1007/s11356-025-36393-5

By:

Hinzke, Tjorven;
Schlüter, Rabea;
Mikolasch, Annett;
Zühlke, Daniela;
Müller, Patrick;
Kleditz, Robert;
Riedel, Katharina;
Lalk, Michael;
Becher, Dörte;
Sheikhany, Halah;
Schauer, Frieder

Publication type:

Article

Costs of life - Dynamics of the protein inventory of Staphylococcus aureus during anaerobiosis.

Published in:

Scientific Reports, 2016, p. 28172, doi. 10.1038/srep28172

By:

Zühlke, Daniela;
Dörries, Kirsten;
Bernhardt, Jörg;
Maaß, Sandra;
Muntel, Jan;
Liebscher, Volkmar;
Pané-Farré, Jan;
Riedel, Katharina;
Lalk, Michael;
Völker, Uwe;
Engelmann, Susanne;
Becher, Dörte;
Fuchs, Stephan;
Hecker, Michael

Publication type:

Article

Cellulose and hemicellulose decomposition by forest soil bacteria proceeds by the action of structurally variable enzymatic systems.

Published in:

Scientific Reports, 2016, p. 25279, doi. 10.1038/srep25279

By:

López-Mondéjar, Rubén;
Zühlke, Daniela;
Becher, Dörte;
Riedel, Katharina;
Baldrian, Petr

Publication type:

Article

Impact of Different Trace Elements on the Growth and Proteome of Two Strains of Granulicella , Class "Acidobacteriia".

Published in:

Frontiers in Microbiology, 2020, v. 11, p. 1, doi. 10.3389/fmicb.2020.01227

By:

Costa, Ohana Y. A.;
Oguejiofor, Chidinma;
Zühlke, Daniela;
Barreto, Cristine C.;
Wünsche, Christine;
Riedel, Katharina;
Kuramae, Eiko E.

Publication type:

Article

Biofilm and Pathogenesis-Related Proteins in the Foodborne P. fluorescens ITEM 17298 With Distinctive Phenotypes During Cold Storage.

Published in:

Frontiers in Microbiology, 2020, v. 11, p. 1, doi. 10.3389/fmicb.2020.00991

By:

Quintieri, Laura;
Fanelli, Francesca;
Zühlke, Daniela;
Caputo, Leonardo;
Logrieco, Antonio Francesco;
Albrecht, Dirk;
Riedel, Katharina

Publication type:

Article

Decoding the complete arsenal for cellulose and hemicellulose deconstruction in the highly efficient cellulose decomposer Paenibacillus O199.

Published in:

Biotechnology for Biofuels, 2016, v. 9, p. 1, doi. 10.1186/s13068-016-0518-x

By:

López-Mondéjar, Rubén;
Zühlke, Daniela;
Větrovský, Tomá;
Becher, Dörte;
Riedel, Katharina;
Baldrian, Petr

Publication type:

Article

Comparative proteome analysis in an Escherichia coli CyDisCo strain identifies stress responses related to protein production, oxidative stress and accumulation of misfolded protein.

Published in:

Microbial Cell Factories, 2019, v. 18, n. 1, p. N.PAG, doi. 10.1186/s12934-019-1071-7

By:

Guerrero Montero, Isabel;
Dolata, Katarzyna Magdalena;
Schlüter, Rabea;
Malherbe, Gilles;
Sievers, Susanne;
Zühlke, Daniela;
Sura, Thomas;
Dave, Emma;
Riedel, Katharina;
Robinson, Colin

Publication type:

Article

Bacillus pumilus KatX2 confers enhanced hydrogen peroxide resistance to a Bacillus subtilis PkatA::katX2 mutant strain.

Published in:

Microbial Cell Factories, 2017, v. 16, p. 1, doi. 10.1186/s12934-017-0684-y

By:

Handtke, Stefan;
Albrecht, Dirk;
Zühlke, Daniela;
Otto, Andreas;
Becher, Dörte;
Schweder, Thomas;
Riedel, Kathrin;
Hecker, Michael;
Voigt, Birgit

Publication type:

Article

Model of persistent foot‐and‐mouth disease virus infection in multilayered cells derived from bovine dorsal soft palate.

Published in:

Transboundary & Emerging Diseases, 2020, v. 67, n. 1, p. 133, doi. 10.1111/tbed.13332

By:

Hägglund, Sara;
Laloy, Eve;
Näslund, Katarina;
Pfaff, Florian;
Eschbaumer, Michael;
Romey, Aurore;
Relmy, Anthony;
Rikberg, Annika;
Svensson, Anna;
Huet, Helene;
Gorna, Kamila;
Zühlke, Daniela;
Riedel, Katharina;
Beer, Martin;
Zientara, Stephan;
Bakkali‐Kassimi, Labib;
Blaise‐Boisseau, Sandra;
Valarcher, Jean François

Publication type:

Article

Clp-mediated proteolysis in Gram-positive bacteria is autoregulated by the stability of a repressor.

Published in:

EMBO Journal, 2001, v. 20, n. 4, p. 852, doi. 10.1093/emboj/20.4.852

By:

Krüger, Elke;
Zühlke, Daniela;
Witt, Elke;
Ludwig, Holger;
Hecker, Michael

Publication type:

Article

Responses of AcidobacteriaGranulicella sp. WH15 to High Carbon Revealed by Integrated Omics Analyses.

Published in:

Microorganisms, 2020, v. 8, n. 2, p. 244, doi. 10.3390/microorganisms8020244

By:

Costa, Ohana Y.A.;
Zerillo, Marcelo M.;
Zühlke, Daniela;
Kielak, Anna M.;
Pijl, Agata;
Riedel, Katharina;
Kuramae, Eiko E.

Publication type:

Article

Distribution and diversity of classical deacylases in bacteria.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-53903-0

By:

Graf, Leonie G.;
Moreno-Yruela, Carlos;
Qin, Chuan;
Schulze, Sabrina;
Palm, Gottfried J.;
Schmöker, Ole;
Wang, Nancy;
Hocking, Dianna M.;
Jebeli, Leila;
Girbardt, Britta;
Berndt, Leona;
Dörre, Babett;
Weis, Daniel M.;
Janetzky, Markus;
Albrecht, Dirk;
Zühlke, Daniela;
Sievers, Susanne;
Strugnell, Richard A.;
Olsen, Christian A.;
Hofmann, Kay

Publication type:

Article

The microbiome of the lichen Lobaria pulmonaria varies according to climate on a subcontinental scale.

Published in:

Environmental Microbiology Reports, 2024, v. 16, n. 3, p. 1, doi. 10.1111/1758-2229.13289

By:

Bogale, Anteneh Tamirat;
Braun, Maria;
Bernhardt, Jörg;
Zühlke, Daniela;
Schiefelbein, Ulf;
Bog, Manuela;
Scheidegger, Christoph;
Zengerer, Veronika;
Becher, Dörte;
Grube, Martin;
Riedel, Katharina;
Bengtsson, Mia M.

Publication type:

Article

An optimized metaproteomics protocol for a holistic taxonomic and functional characterization of microbial communities from marine particles.

Published in:

Environmental Microbiology Reports, 2020, v. 12, n. 4, p. 367, doi. 10.1111/1758-2229.12842

By:

Schultz, Doreen;
Zühlke, Daniela;
Bernhardt, Jörg;
Francis, Thomas Ben;
Albrecht, Dirk;
Hirschfeld, Claudia;
Markert, Stephanie;
Riedel, Katharina

Publication type:

Article

Proteome and carbon flux analysis of Pseudomonas aeruginosa clinical isolates from different infection sites.

Published in:

Proteomics, 2016, v. 16, n. 9, p. 1381, doi. 10.1002/pmic.201500228

By:

Lassek, Christian;
Berger, Antje;
Zühlke, Daniela;
Wittmann, Christoph;
Riedel, Katharina

Publication type:

Article

Staphylococcus aureus physiological growth limitations: Insights from flux calculations built on proteomics and external metabolite data.

Published in:

Proteomics, 2011, v. 11, n. 10, p. 1915, doi. 10.1002/pmic.201000151

By:

Liang, Chunguang;
Liebeke, Manuel;
Schwarz, Roland;
Zühlke, Daniela;
Fuchs, Stephan;
Menschner, Leonhard;
Engelmann, Susanne;
Wolz, Christiane;
Jaglitz, Sarah;
Bernhardt, Jörg;
Hecker, Michael;
Lalk, Michael;
Dandekar, Thomas

Publication type:

Article

Protecs, a comprehensive and powerful storage and analysis system for OMICS data, applied for profiling the anaerobiosis response of Staphylococcus aureus COL.

Published in:

Proteomics, 2010, v. 10, n. 16, p. 2982, doi. 10.1002/pmic.200900388

By:

Fuchs, Stephan;
Mehlan, Henry;
Kusch, Harald;
Teumer, Alexander;
Zühlke, Daniela;
Berth, Matthias;
Wolf, Carmen;
Dandekar, Thomas;
Hecker, Michael;
Engelmann, Susanne;
Bernhardt, Jörg

Publication type:

Article

A proteomic view of the facultatively chemolithoautotrophic lifestyle of Ralstonia eutropha H16.

Published in:

Proteomics, 2009, v. 9, n. 22, p. 5132, doi. 10.1002/pmic.200900333

By:

Schwartz, Edward;
Voigt, Birgit;
Zühlke, Daniela;
Pohlmann, Anne;
Lenz, Oliver;
Albrecht, Dirk;
Schwarze, Alexander;
Kohlmann, Yvonne;
Krause, Cornelia;
Hecker, Michael;
Friedrich, Bärbel

Publication type:

Article

Proteolysis during long-term glucose starvation in Staphylococcus aureus COL.

Published in:

Proteomics, 2009, v. 9, n. 19, p. 4468, doi. 10.1002/pmic.200900168

By:

Michalik, Stephan;
Liebeke, Manuel;
Zühlke, Daniela;
Lalk, Michael;
Bernhardt, Jörg;
Gerth, Ulf;
Hecker, Michael

Publication type:

Article

Proteogenomics Uncovers Critical Elements of Host Response in Bovine Soft Palate Epithelial Cells Following In Vitro Infection with Foot-And-Mouth Disease Virus.

Published in:

Viruses (1999-4915), 2019, v. 11, n. 1, p. 53, doi. 10.3390/v11010053

By:

Pfaff, Florian;
Hägglund, Sara;
Zoli, Martina;
Blaise-Boisseau, Sandra;
Laloy, Eve;
Koethe, Susanne;
Zühlke, Daniela;
Riedel, Katharina;
Zientara, Stephan;
Bakkali-Kassimi, Labib;
Valarcher, Jean-François;
Höper, Dirk;
Beer, Martin;
Eschbaumer, Michael

Publication type:

Article

Myxopyronin B inhibits growth of a Fidaxomicin-resistant Clostridioides difficile isolate and interferes with toxin synthesis.

Published in:

Gut Pathogens, 2022, v. 14, n. 1, p. 1, doi. 10.1186/s13099-021-00475-9

By:

Brauer, Madita;
Herrmann, Jennifer;
Zühlke, Daniela;
Müller, Rolf;
Riedel, Katharina;
Sievers, Susanne

Publication type:

Article

Biotransformation and reduction of estrogenicity of bisphenol A by the biphenyl-degrading Cupriavidus basilensis.

Published in:

Applied Microbiology & Biotechnology, 2017, v. 101, n. 9, p. 3743, doi. 10.1007/s00253-016-8061-z

By:

Zühlke, Marie-Katherin;
Schlüter, Rabea;
Mikolasch, Annett;
Zühlke, Daniela;
Giersberg, Martin;
Schindler, Henning;
Henning, Ann-Kristin;
Frenzel, Heidi;
Hammer, Elke;
Lalk, Michael;
Bornscheuer, Uwe;
Riedel, Katharina;
Kunze, Gotthard;
Schauer, Frieder

Publication type:

Article

Genes for laminarin degradation are dispersed in the genomes of particle-associated Maribacter species.

Published in:

Frontiers in Microbiology, 2024, p. 1, doi. 10.3389/fmicb.2024.1393588

By:

Kalenborn, Saskia;
Zühlke, Daniela;
Reintjes, Greta;
Riedel, Katharina;
Amann, Rudolf I.;
Harder, Jens

Publication type:

Article

Correction: Muñoz-Villagrán et al. The Thioredoxin Fold Protein (TFP2) from Extreme Acidophilic Leptospirillum sp. CF-1 Is a Chaperedoxin-like Protein That Prevents the Aggregation of Proteins under Oxidative Stress. Int. J. Mol. Sci. 2024, 25 , 6905

Published in:

2024

By:

Muñoz-Villagrán, Claudia;
Acevedo-Arbunic, Javiera;
Härtig, Elisabeth;
Sievers, Susanne;
Zühlke, Daniela;
Issotta, Francisco;
Mascayano, Carolina;
Jahn, Dieter;
Jahn, Martina;
Levicán, Gloria

Publication type:

Correction Notice

CtsR, the Gram-positive master regulator of protein quality control, feels the heat.

Published in:

EMBO Journal, 2010, v. 29, n. 21, p. 3621, doi. 10.1038/emboj.2010.228

By:

Elsholz, Alexander K. W.;
Michalik, Stephan;
Zühlke, Daniela;
Hecker, Michael;
Gerth, Ulf

Publication type:

Article

A tyrosine kinase and its activator control the activity of the CtsR heat shock repressor in B. subtilis.

Published in:

EMBO Journal, 2005, v. 24, n. 19, p. 3435, doi. 10.1038/sj.emboj.7600780

By:

Kirstein, Janine;
Zühlke, Daniela;
Gerth, Ulf;
Turgay, Kürşad;
Hecker, Michael

Publication type:

Article