Works matching AU Yu-Chieh Liao

Results: 27

Streamlining whole genome sequencing for clinical diagnostics with ONT technology.

Published in:

Scientific Reports, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41598-025-90127-8

By:

Wu, Han-Chieh;
Chiu, Yueh-Tzu;
Wu, I-Ching;
Liou, Ci-Hong;
Cheng, Hung-Wei;
Kuo, Shu-Chen;
Lauderdale, Tsai-Ling;
Sytwu, Huey-Kang;
Liao, Yu-Chieh;
Chen, Feng-Jui

Publication type:

Article

drVM: a new tool for eficient genome assembly of known eukaryotic viruses from metagenomes.

Published in:

GigaScience, 2017, v. 6, n. 2, p. 1, doi. 10.1093/gigascience/gix003

By:

Hsin-Hung Lin;
Yu-Chieh Liao

Publication type:

Article

Completing Circular Bacterial Genomes With Assembly Complexity by Using a Sampling Strategy From a Single MinION Run With Barcoding.

Published in:

Frontiers in Microbiology, 2019, p. 1, doi. 10.3389/fmicb.2019.02068

By:

Liao, Yu-Chieh;
Cheng, Hung-Wei;
Wu, Han-Chieh;
Kuo, Shu-Chen;
Lauderdale, Tsai-Ling Yang;
Chen, Feng-Jui

Publication type:

Article

ATIVS: analytical tool for influenza virus surveillance.

Published in:

Nucleic Acids Research, 2009, v. 37, n. suppl_2, p. W643, doi. 10.1093/nar/gkp321

By:

Liao, Yu-Chieh;
Ko, Chin-Yu;
Tsai, Ming-Hsin;
Lee, Min-Shi;
Hsiung, Chao A.

Publication type:

Article

Genomic analysis of serologically untypable human enteroviruses in Taiwan.

Published in:

Journal of Biomedical Science, 2019, v. 26, n. 1, p. N.PAG, doi. 10.1186/s12929-019-0541-x

By:

Chien, Yeh-Sheng;
Luo, Shu-Ting;
Tsao, Kuo-Chien;
Huang, Yhu-Chering;
Chung, Wan-Yu;
Liao, Yu-Chieh;
Tan, Yi;
Das, Suman R.;
Lee, Min-Shi

Publication type:

Article

Monitoring the antigenic evolution of human influenza A viruses to understand how and when viruses escape from existing immunity.

Published in:

BMC Research Notes, 2013, v. 6, n. 1, p. 1, doi. 10.1186/1756-0500-6-227

By:

Liao, Yu-Chieh;
Lin, Hsin-Hung;
Lin, Chieh-Hua

Publication type:

Article

A Simple and Quantitative Method for Analysis of Methoxyamine by Capillary Zone Electrophoresis.

Published in:

Journal of Liquid Chromatography & Related Technologies, 2005, v. 28, n. 15, p. 2433, doi. 10.1080/10826070500187665

By:

Liao, Yu‐Chieh;
Syu, Mei‐Jywan;
Xu, Yan

Publication type:

Article

Bioinformatics models for predicting antigenic variants of influenza A/H3N2 virus.

Published in:

Bioinformatics, 2008, v. 24, n. 4, p. 505, doi. 10.1093/bioinformatics/btm638

By:

Yu-Chieh Liao;
Min-Shi Lee;
Chin-Yu Ko;
Chao A. Hsiung

Publication type:

Article

Distribution and Genomic Characterization of Third-Generation Cephalosporin-Resistant Escherichia coli Isolated from a Single Family and Home Environment: A 2-Year Longitudinal Study.

Published in:

Antibiotics (2079-6382), 2022, v. 11, n. 9, p. 1152, doi. 10.3390/antibiotics11091152

By:

Feng, Yin-Chih;
Liou, Ci-Hong;
Ng, Wailap Victor;
Chen, Feng-Jui;
Hung, Chih-Hsin;
Liu, Po-Yen;
Liao, Yu-Chieh;
Wu, Han-Chieh;
Cheng, Ming-Fang

Publication type:

Article

High-Integrity Sequencing of Spike Gene for SARS-CoV-2 Variant Determination.

Published in:

International Journal of Molecular Sciences, 2022, v. 23, n. 6, p. 3257, doi. 10.3390/ijms23063257

By:

Liao, Yu-Chieh;
Chen, Feng-Jui;
Chuang, Min-Chieh;
Wu, Han-Chieh;
Ji, Wan-Chen;
Yu, Guann-Yi;
Huang, Tsi-Shu

Publication type:

Article

Comparative genomics and evolution of the amylase-binding proteins of oral streptococci.

Published in:

BMC Microbiology, 2017, v. 17, p. 1, doi. 10.1186/s12866-017-1005-7

By:

Haase, Elaine M.;
Kou, Yurong;
Sabharwal, Amarpreet;
Yu-Chieh Liao;
Tianying Lan;
Lindqvist, Charlotte;
Scannapieco, Frank A.

Publication type:

Article

GEMSiRV: a software platform for GEnome-scale metabolic model simulation, reconstruction and visualization.

Published in:

Bioinformatics, 2012, v. 28, n. 13, p. 1752, doi. 10.1093/bioinformatics/bts267

By:

Liao, Yu-Chieh;
Tsai, Ming-Hsin;
Chen, Feng-Chi;
Hsiung, Chao A.

Publication type:

Article

Comprehensive pathogen identification and antimicrobial resistance prediction from positive blood cultures using nanopore sequencing technology.

Published in:

Genome Medicine, 2024, v. 16, n. 1, p. 1, doi. 10.1186/s13073-024-01416-2

By:

Liu, Po-Yu;
Wu, Han-Chieh;
Li, Ying-Lan;
Cheng, Hung-Wei;
Liou, Ci-Hong;
Chen, Feng-Jui;
Liao, Yu-Chieh

Publication type:

Article

A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2.

Published in:

BMC Systems Biology, 2011, v. 5, n. 1, p. 1, doi. 10.1186/1752-0509-5-8

By:

Thiele, Ines;
Hyduke, Daniel R.;
Steeb, Benjamin;
Fankam, Guy;
Allen, Douglas K.;
Bazzani, Susanna;
Charusanti, Pep;
Feng-Chi Chen;
Fleming, Ronan M. T.;
Hsiung, Chao A.;
De Keersmaecker, Sigrid C. J.;
Yu-Chieh Liao;
Marchal, Kathleen;
Mo, Monica L.;
Özdemir, Emre;
Raghunathan, Anu;
Reed, Jennifer L.;
Sook-Il Shin;
Sigurbjörnsdóttir, Sara;
Steinmann, Jonas

Publication type:

Article

Intestinal dual-specificity phosphatase 6 regulates the cold-induced gut microbiota remodeling to promote white adipose browning.

Published in:

NPJ Biofilms & Microbiomes, 2024, v. 10, n. 1, p. 1, doi. 10.1038/s41522-024-00495-8

By:

Chen, Pei-Chen;
Tsai, Tzu-Pei;
Liao, Yi-Chu;
Liao, Yu-Chieh;
Cheng, Hung-Wei;
Weng, Yi-Hsiu;
Lin, Chiao-Mei;
Kao, Cheng-Yuan;
Tai, Chih-Cheng;
Ruan, Jhen-Wei

Publication type:

Article

The clinical impacts of lung microbiome in bronchiectasis with fixed airflow obstruction: a prospective cohort study.

Published in:

Respiratory Research, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12931-024-02931-x

By:

Chen, Yen-Fu;
Hou, Hsin-Han;
Chien, Ning;
Lu, Kai-Zen;
Lin, Chieh-Hua;
Liao, Yu-Chieh;
Lor, Kuo-Lung;
Chien, Jung-Yien;
Chen, Chung-Ming;
Chen, Chung-Yu;
Cheng, Shih-Lung;
Wang, Hao-Chien;
Hsueh, Po-Ren;
Yu, Chong-Jen

Publication type:

Article

DNA oxidation after exercise: a systematic review and meta-analysis.

Published in:

Frontiers in Physiology, 2023, p. 1, doi. 10.3389/fphys.2023.1275867

By:

Mengxin Ye;
Dewi, Luthfia;
Yu-Chieh Liao;
Nicholls, Andrew;
Chih-Yang Huang;
Chia-Hua Kuo

Publication type:

Article

Evaluation and Validation of Assembling Corrected PacBio Long Reads for Microbial Genome Completion via Hybrid Approaches.

Published in:

PLoS ONE, 2015, v. 10, n. 12, p. 1, doi. 10.1371/journal.pone.0144305

By:

Lin, Hsin-Hung;
Liao, Yu-Chieh

Publication type:

Article

Pros and Cons of the Tuberculosis Drugome Approach – An Empirical Analysis.

Published in:

PLoS ONE, 2014, v. 9, n. 6, p. 1, doi. 10.1371/journal.pone.0100829

By:

Chen, Feng-Chi;
Liao, Yu-Chieh;
Huang, Jie-Mao;
Lin, Chieh-Hua;
Chen, Yih-Yuan;
Dou, Horng-Yunn;
Hsiung, Chao Agnes

Publication type:

Article

Identification of Cytotoxic T Lymphocyte Epitopes on Swine Viruses: Multi-Epitope Design for Universal T Cell Vaccine.

Published in:

PLoS ONE, 2013, v. 8, n. 12, p. 1, doi. 10.1371/journal.pone.0084443

By:

Liao, Yu-Chieh;
Lin, Hsin-Hung;
Lin, Chieh-Hua;
Chung, Wen-Bin

Publication type:

Article

CISA: Contig Integrator for Sequence Assembly of Bacterial Genomes.

Published in:

PLoS ONE, 2013, v. 8, n. 3, p. 1, doi. 10.1371/journal.pone.0060843

By:

Lin, Shin-Hung;
Liao, Yu-Chieh

Publication type:

Article

Rapid and Routine Molecular Typing Using Multiplex Polymerase Chain Reaction and MinION Sequencer.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.875347

By:

Liao, Yu-Chieh;
Wu, Han-Chieh;
Liou, Ci-Hong;
Lauderdale, Tsai-Ling Yang;
Huang, I-Wen;
Lai, Jui-Fen;
Chen, Feng-Jui

Publication type:

Article

Detection in Orchards of Predominant Azole-Resistant Candida tropicalis Genotype Causing Human Candidemia, Taiwan.

Published in:

Emerging Infectious Diseases, 2024, v. 30, n. 11, p. 2323, doi. 10.3201/eid3011.240545

By:

Kuo-Yun Tseng;
Yin-Zhi Chen;
Zi-Li Zhou;
Jyh-Nong Tsai;
Min-Nan Tseng;
Hsing-Lung Liu;
Chi-Jung Wu;
Yu-Chieh Liao;
Chih-Chao Lin;
De-Jiun Tsai;
Feng-Jui Chen;
Li-Yun Hsieh;
Kuan-Chung Huang;
Chun-Hua Huang;
Kai-Ting Chen;
Wen-Li Chu;
Chiao-Mei Lin;
Shu-Man Shih;
Chao Agnes Hsiung;
Yee-Chun Chen

Publication type:

Article

Susceptibility of Elizabethkingia spp. to commonly tested and novel antibiotics and concordance between broth microdilution and automated testing methods.

Published in:

2021

By:

Kuo, Shu-Chen;
Tan, Mei-Chen;
Huang, Wei-Cheng;
Wu, Han-Chieh;
Chen, Feng-Jui;
Liao, Yu-Chieh;
Wang, Hui-Ying;
Shiau, Yih-Ru;
Lauderdale, Tsai-Ling

Publication type:

journal article

Comparative Pan-Genome Analysis of Oral Veillonella Species.

Published in:

Microorganisms, 2021, v. 9, n. 8, p. 1775, doi. 10.3390/microorganisms9081775

By:

Mashima, Izumi;
Liao, Yu-Chieh;
Lin, Chieh-Hua;
Nakazawa, Futoshi;
Haase, Elaine M.;
Kiyoura, Yusuke;
Scannapieco, Frank A.

Publication type:

Article

Accurate binning of metagenomic contigs via automated clustering sequences using information of genomic signatures and marker genes.

Published in:

Scientific Reports, 2016, p. 24175, doi. 10.1038/srep24175

By:

Lin, Hsin-Hung;
Liao, Yu-Chieh

Publication type:

Article

Completing bacterial genome assemblies: strategy and performance comparisons.

Published in:

Scientific Reports, 2015, p. 8747, doi. 10.1038/srep08747

By:

Liao, Yu-Chieh;
Lin, Shu-Hung;
Lin, Hsin-Hung

Publication type:

Article