Works matching AU Yu, Qingyi

Results: 58

An integrated cytogenetic and physical map reveals unevenly distributed recombination spots along the papaya sex chromosomes.

Published in:

Chromosome Research, 2012, v. 20, n. 6, p. 753, doi. 10.1007/s10577-012-9312-1

By:

Wai, Ching;
Moore, Paul;
Paull, Robert;
Ming, Ray;
Yu, Qingyi

Publication type:

Article

A nuclear tRNA-derived fragment triggers immunity in Arabidopsis.

Published in:

Communications Biology, 2025, v. 8, n. 1, p. 1, doi. 10.1038/s42003-025-07737-1

By:

Kim, Sung-Il;
Lyu, Haomin;
Pujara, Dinesh S.;
Bordiya, Yogendra;
Bhatt, Padam S.;
Mayorga, José;
Zogli, Prince K.;
Kundu, Pritha;
Chung, Haewon;
Yan, Xingxing;
Zhang, Xiuren;
Kim, Jonghwan;
Louis, Joe;
Yu, Qingyi;
Kang, Hong-Gu

Publication type:

Article

Sequence-tagged high-density genetic maps of Zoysia japonica provide insights into genome evolution in Chloridoideae.

Published in:

Plant Journal, 2015, v. 82, n. 5, p. 744, doi. 10.1111/tpj.12842

By:

Wang, Fangfang;
Singh, Ratnesh;
Genovesi, Anthony D.;
Wai, Ching Man;
Huang, Xiaoen;
Chandra, Ambika;
Yu, Qingyi

Publication type:

Article

The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).

Published in:

Nature, 2008, v. 452, n. 7190, p. 991, doi. 10.1038/nature06856

By:

Ming, Ray;
Hou, Shaobin;
Yun Feng;
Qingyi Yu;
Dionne-Laporte, Alexandre;
Saw, Jimmy H.;
Senin, Pavel;
Wei Wang;
Ly, Benjamin V.;
Lewis, Kanako L. T.;
Salzberg, Steven L.;
Lu Feng;
Jones, Meghan R.;
Skelton, Rachel L.;
Murray, Jan E.;
Chen, Cuixia;
Wubin Qian;
Junguo Shen;
Du, Peng;
Eustice, Moriah

Publication type:

Article

A primitive Y chromosome in papaya marks incipient sex chromosome evolution.

Published in:

Nature, 2004, v. 427, n. 6972, p. 348, doi. 10.1038/nature02228

By:

Zhiyong Liu;
Moore, Paul H.;
Hao Ma;
Ackerman, Christine M.;
Ragiba, Makandar;
Qingyi Yu, Makandar;
Pearl, Heather M.;
Kim, Minna S.;
Charlton, Joseph W.;
Stiles, John I.;
Zee, Francis T.;
Peterson, Andrew H.;
Ming, Ray

Publication type:

Article

Holo‐omics disentangle drought response and biotic interactions among plant, endophyte and pathogen.

Published in:

New Phytologist, 2025, v. 246, n. 6, p. 2702, doi. 10.1111/nph.70155

By:

Chen, Peilin;
Yu, Qingyi;
Wang, Cong;
Montoya, Liliam;
West, Patrick T.;
Xu, Ling;
Varoquaux, Nelle;
Cole, Benjamin;
Hixson, Kim K.;
Kim, Young‐Mo;
Liu, Ling;
Zhang, Baodan;
Zhang, Jie;
Li, Baiyang;
Purdom, Elizabeth;
Vogel, John;
Jansson, Christer;
Hutmacher, Robert B.;
Dahlberg, Jeffery A.;
Coleman‐Derr, Devin

Publication type:

Article

Positional cloning and characterization of the papaya diminutive mutant reveal a truncating mutation in the CpMMS19 gene.

Published in:

New Phytologist, 2020, v. 225, n. 5, p. 2006, doi. 10.1111/nph.16325

By:

Wang, Ying;
Singh, Ratnesh;
Tong, Eric;
Tang, Min;
Zheng, Liwei;
Fang, Hongkun;
Li, Ruoyu;
Guo, Lin;
Song, Jinjin;
Srinivasan, Rajeswari;
Sharma, Anupma;
Lin, Lianyu;
Trujillo, Jorge A.;
Manshardt, Richard;
Chen, Li‐Yu;
Ming, Ray;
Yu, Qingyi

Publication type:

Article

Micro-collinearity and genome evolution in the vicinity of an ethylene receptor gene of cultivated diploid and allotetraploid coffee species ( Coffea).

Published in:

Plant Journal, 2011, v. 67, n. 2, p. 305, doi. 10.1111/j.1365-313X.2011.04590.x

By:

Yu, Qingyi;
Guyot, Romain;
de Kochko, Alexandre;
Byers, Anne;
Navajas-Pérez, Rafael;
Langston, Brennick J.;
Dubreuil-Tranchant, Christine;
Paterson, Andrew H.;
Poncet, Valérie;
Nagai, Chifumi;
Ming, Ray

Publication type:

Article

The origin of the non-recombining region of sex chromosomes in Carica and Vasconcellea.

Published in:

Plant Journal, 2010, v. 63, n. 5, p. 801, doi. 10.1111/j.1365-313X.2010.04284.x

By:

Xia Wu;
Jianping Wang;
Jong-Kuk Na;
Qingyi Yu;
Moore, Richard C.;
Zee, Francis;
Huber, Steven C.;
Ray Ming

Publication type:

Article

Low X/Y divergence in four pairs of papaya sex-linked genes.

Published in:

Plant Journal, 2008, v. 53, n. 1, p. 124, doi. 10.1111/j.1365-313X.2007.03329.x

By:

Qingyi Yu;
Shaobin Hou;
Feltus, F. Alex;
Jones, Meghan R.;
Murray, Jan E.;
Veatch, Olivia;
Lemke, Cornelia;
Saw, Jimmy H.;
Moore, Richard C.;
Thimmapuram, Jyothi;
Lei Liu;
Moore, Paul H.;
Alam, Maqsudul;
Jiming Jiang;
Paterson, Andrew H.;
Ray Ming

Publication type:

Article

Comparative analysis of sucrose phosphate synthase (SPS) gene family between Saccharum officinarum and Saccharum spontaneum.

Published in:

BMC Plant Biology, 2020, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12870-020-02599-7

By:

Ma, Panpan;
Zhang, Xingtan;
Chen, Lanping;
Zhao, Qian;
Zhang, Qing;
Hua, Xiuting;
Wang, Zhengchao;
Tang, Haibao;
Yu, Qingyi;
Zhang, Muqing;
Ming, Ray;
Zhang, Jisen

Publication type:

Article

Comparative genomics revealed the gene evolution and functional divergence of magnesium transporter families in Saccharum.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-5437-3

By:

Wang, Yongjun;
Hua, Xiuting;
Xu, Jingsheng;
Chen, Zhichang;
Fan, Tianqu;
Zeng, Zhaohui;
Wang, Hengbo;
Hour, Ai-Ling;
Yu, Qingyi;
Ming, Ray;
Zhang, Jisen

Publication type:

Article

Chromosome-level genome assembly and annotation of Anthurium amnicola.

Published in:

Scientific Data, 2025, v. 12, n. 1, p. 1, doi. 10.1038/s41597-025-04939-4

By:

Lyu, Haomin;
Sim, Sheina B.;
Geib, Scott M.;
Imamura, Joanne S. L.;
Corpuz, Briette L.;
Corpuz, Renee L.;
Kauwe, Angela N.;
Simmonds, Tyler J.;
Arakawa, Claire N.;
Myers, Roxana Y.;
Keith, Lisa M.;
Yu, Qingyi;
Matsumoto, Tracie K.;
Amore, Teresita D.;
Suzuki, Jon Y.

Publication type:

Article

Chromosome-level genome assembly and annotation of Anthurium amnicola.

Published in:

Scientific Data, 2025, v. 12, n. 1, p. 1, doi. 10.1038/s41597-025-04939-4

By:

Lyu, Haomin;
Sim, Sheina B.;
Geib, Scott M.;
Imamura, Joanne S. L.;
Corpuz, Briette L.;
Corpuz, Renee L.;
Kauwe, Angela N.;
Simmonds, Tyler J.;
Arakawa, Claire N.;
Myers, Roxana Y.;
Keith, Lisa M.;
Yu, Qingyi;
Matsumoto, Tracie K.;
Amore, Teresita D.;
Suzuki, Jon Y.

Publication type:

Article

Comprehensively Characterizing the Cytological Features of Saccharum spontaneum by the Development of a Complete Set of Chromosome-Specific Oligo Probes.

Published in:

Frontiers in Plant Science, 2018, p. N.PAG, doi. 10.3389/fpls.2018.01624

By:

Meng, Zhuang;
Zhang, Zhiliang;
Yan, Tianying;
Lin, Qingfang;
Wang, Yu;
Huang, Weiyuan;
Huang, Yongji;
Li, Zhanjie;
Yu, Qingyi;
Wang, Jianping;
Wang, Kai

Publication type:

Article

Harnessing Crop Wild Diversity for Climate Change Adaptation.

Published in:

Genes, 2021, v. 12, n. 5, p. 783, doi. 10.3390/genes12050783

By:

Cortés, Andrés J.;
López-Hernández, Felipe;
Yu, Qingyi

Publication type:

Article

The Diversity of Plant Sex Chromosomes Highlighted through Advances in Genome Sequencing.

Published in:

Genes, 2021, v. 12, n. 3, p. 381, doi. 10.3390/genes12030381

By:

Carey, Sarah;
Yu, Qingyi;
Harkess, Alex;
Cruciani, Fulvio

Publication type:

Article

Identification of Imprinted Genes Based on Homology: An Example of Fragaria vesca.

Published in:

Genes, 2021, v. 12, n. 3, p. 380, doi. 10.3390/genes12030380

By:

Liu, Yaping;
Jing, Xiaotong;
Zhang, Hong;
Xiong, Jinsong;
Qiao, Yushan;
Yu, Qingyi

Publication type:

Article

Genomic and Transcriptomic Insights into the Evolution of C<sub>4</sub> Photosynthesis in Grasses.

Published in:

Genome Biology & Evolution, 2024, v. 16, n. 8, p. 1, doi. 10.1093/gbe/evae163

By:

Lyu, Haomin;
Yim, Won Cheol;
Yu, Qingyi

Publication type:

Article

Diurnal Cycling Transcription Factors of Pineapple Revealed by Genome-Wide Annotation and Global Transcriptomic Analysis.

Published in:

Genome Biology & Evolution, 2017, v. 9, n. 9, p. 2170, doi. 10.1093/gbe/evx161

By:

Sharma, Anupma;
Ching Man Wai;
Ray Ming;
Qingyi Yu

Publication type:

Article

Recent amplification of microsatellite-associated miniature inverted-repeat transposable elements in the pineapple genome.

Published in:

BMC Plant Biology, 2021, v. 21, n. 1, p. 1, doi. 10.1186/s12870-021-03194-0

By:

Lin, Lianyu;
Sharma, Anupma;
Yu, Qingyi

Publication type:

Article

Chromosome Nomenclature and Cytological Characterization of Sacred Lotus.

Published in:

Cytogenetic & Genome Research, 2018, v. 153, n. 4, p. 223, doi. 10.1159/000486777

By:

Meng, Zhuang;
Hu, Xiaoxu;
Zhang, Zhiliang;
Li, Zhanjie;
Lin, Qingfang;
Yang, Mei;
Yang, Pingfang;
Ming, Ray;
Yu, Qingyi;
Wang, Kai

Publication type:

Article

B-class MADS-box genes in trioecious papaya: two paleoAP3 paralogs, CpTM6-1 and CpTM6-2, and a PI ortholog CpPI.

Published in:

Planta: An International Journal of Plant Biology, 2008, v. 227, n. 4, p. 741, doi. 10.1007/s00425-007-0653-5

By:

Ackerman, Christine M.;
Qingyi Yu;
Sangtae Kim;
Paull, Robert E.;
Moore, Paul H.;
Ming, Ray

Publication type:

Article

Chromosomal location and gene paucity of the male specific region on papaya Y chromosome.

Published in:

Molecular Genetics & Genomics, 2007, v. 278, n. 2, p. 177, doi. 10.1007/s00438-007-0243-z

By:

Qingyi Yu;
Shaobin Hou;
Roman Hobza;
F. Feltus;
Xiue Wang;
Weiwei Jin;
Rachel Skelton;
Cornelia Lemke;
Jimmy Saw;
Paul Moore;
Maqsudul Alam;
Jiming Jiang;
Andrew Paterson;
Boris Vyskot

Publication type:

Article

Analysis of papaya BAC end sequences reveals first insights into the organization of a fruit tree genome.

Published in:

Molecular Genetics & Genomics, 2006, v. 276, n. 1, p. 1, doi. 10.1007/s00438-006-0122-z

By:

Chun Lai;
Qingyi Yu;
Shaobin Hou;
Rachel Skelton;
Meghan Jones;
Kanako Lewis;
Jan Murray;
Moriah Eustice;
Peizhu Guan;
Ricelle Agbayani;
Paul Moore;
Ray Ming;
Gernot Presting

Publication type:

Article

From Flood Control System to Agroforestry Heritage System: Past, Present and Future of the Mulberry-Dykes and Fishponds System of Huzhou City, China.

Published in:

Land (2012), 2022, v. 11, n. 11, p. 1920, doi. 10.3390/land11111920

By:

Santoro, Antonio;
Yu, Qingyi;
Piras, Francesco;
Fiore, Beatrice;
Bazzurro, Alessandra;
Agnoletti, Mauro

Publication type:

Article

Improvement of High-efficiency Green Catalysts for Flue Gas Denitrification.

Published in:

Meteorological & Environmental Research, 2024, v. 15, n. 4, p. 49, doi. 10.19547/j.issn2152-3940.2024.04.013

By:

Liyan JIN;
Qingyi YU;
Naixin ZHANG;
Yu WEI;
Xinlu YANG;
Yu GAO

Publication type:

Article

An Integrated Health and Wellness Model in a College Setting: A Path Analysis Pilot Investigation.

Published in:

Journal of College Student Mental Health, 2025, v. 39, n. 2, p. 221, doi. 10.1080/28367138.2024.2338940

By:

Liu, Yanhong;
Beauparlant, Emily T.;
Gao, Si;
Yu, Qingyi

Publication type:

Article

Structure, phylogeny, allelic haplotypes and expression of sucrose transporter gene families in Saccharum.

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2419-6

By:

Qing Zhang;
Weichang Hu;
Fan Zhu;
Liming Wang;
Qingyi Yu;
Ray Ming;
Jisen Zhang

Publication type:

Article

Sex specific expression and distribution of small RNAs in papaya.

Published in:

BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-20

By:

Aryal, Rishi;
Jagadeeswaran, Guru;
Yun Zheng;
Qingyi Yu;
Sunkar, Ramanjulu;
Ray Ming

Publication type:

Article

Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-682

By:

Aryal, Rishi;
Yang, Xiaozeng;
Yu, Qingyi;
Sunkar, Ramanjulu;
Li, Lei;
Ming, Ray

Publication type:

Article

Construction of physical maps for the sex-specific regions of papaya sex chromosomes.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 176, doi. 10.1186/1471-2164-13-176

By:

Jong-Kuk Na;
Jianping Wang;
Murray, Jan E.;
Gschwend, Andrea R.;
Wenli Zhang;
Qingyi Yu;
Navajas- Pï¿½rez, Rafael;
Feltus, F. Alex;
Cuixia Chen;
Kubat, Zdenek;
Moore, Paul H.;
Jiming Jiang;
Paterson, Andrew H.;
Ray Ming, Ray Ming

Publication type:

Article

Cloning of the Papaya Chromoplast-Specific Lycopene β-Cyclase, CpCYC-b, Controlling Fruit Flesh Color Reveals Conserved Microsynteny and a Recombination Hot Spot.

Published in:

Plant Physiology, 2010, v. 152, n. 4, p. 2013, doi. 10.1104/pp.109.152298

By:

Blas, Andrea L.;
Ming, Ray;
Zhiyong Liu;
Veatch, Olivia J.;
Paul, Robert E.;
Moore, Paul H.;
Qingyi Yu

Publication type:

Article

Papain-like cysteine proteases in Carica papaya: lineage-specific gene duplication and expansion.

Published in:

BMC Genomics, 2018, v. 19, p. 1, doi. 10.1186/s12864-017-4394-y

By:

Liu, Juan;
Sharma, Anupma;
Niewiara, Marie Jamille;
Singh, Ratnesh;
Ming, Ray;
Yu, Qingyi

Publication type:

Article

Extremely low nucleotide diversity in the X-linked region of papaya caused by a strong selective sweep.

Published in:

Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-1095-9

By:

VanBuren, Robert;
Ching Man Wai;
Jisen Zhang;
Han, Jennifer;
Arro, Jie;
Zhicong Lin;
Zhenyang Liao;
Qingyi Yu;
Ming-Li Wang;
Zee, Francis;
Moore, Richard C.;
Charlesworth, Deborah;
Ray Ming

Publication type:

Article

Transcriptional regulation of dosage compensation in Carica papaya.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-85480-3

By:

Liu, Juan;
Han, Jennifer;
Sharma, Anupma;
Wai, Ching Man;
Ming, Ray;
Yu, Qingyi

Publication type:

Article

Editorial: Women in plant multi-omics: 2023.

Published in:

Frontiers in Plant Science, 2024, p. 1, doi. 10.3389/fpls.2024.1487736

By:

Tu, Min;
Chen, Yanmei;
Liu, Weizhen;
Yu, Qingyi;
Li, Yin;
Wang, Wenqin

Publication type:

Article

Editorial: Women in plant multi-omics: 2023.

Published in:

Frontiers in Plant Science, 2024, p. 01, doi. 10.3389/fpls.2024.1487736

By:

Min Tu;
Yanmei Chen;
Weizhen Liu;
Qingyi Yu;
Yin Li;
Wenqin Wang

Publication type:

Article

Editorial: Women in plant multi-omics: 2023.

Published in:

Frontiers in Plant Science, 2024, p. 1, doi. 10.3389/fpls.2024.1487736

By:

Min Tu;
Yanmei Chen;
Weizhen Liu;
Qingyi Yu;
Yin Li;
Wenqin Wang

Publication type:

Article

Cold Responsive Gene Expression Profiling of Sugarcane and Saccharum spontaneum with Functional Analysis of a Cold Inducible Saccharum Homolog of NOD26-Like Intrinsic Protein to Salt and Water Stress.

Published in:

PLoS ONE, 2015, v. 10, n. 5, p. 1, doi. 10.1371/journal.pone.0125810

By:

Park, Jong-Won;
Benatti, Thiago R.;
Marconi, Thiago;
Yu, Qingyi;
Solis-Gracia, Nora;
Mora, Victoria;
da Silva, Jorge A.

Publication type:

Article

Tissue differential expression of lycopene β-cyclase gene in papaya.

Published in:

Cell Research, 2006, v. 16, n. 8, p. 731, doi. 10.1038/sj.cr.7310081

By:

Skelton, Rachel L.;
Qingyi Yu;
Srinivasan, Rajeswari;
Manshardt, Richard;
Moore, Paul H.;
Ming, Ray

Publication type:

Article

Construction of Papaya Male and Female BAC Libraries and Application in Physical Mapping of the Sex Chromosomes.

Published in:

Journal of Biomedicine & Biotechnology, 2011, p. 1, doi. 10.1155/2011/929472

By:

Gschwend, Andrea R.;
Qingyi Yu;
Moore, Paul;
Saski, Christopher;
Chen, Cuixia;
Wang, Jianping;
Jong-Kuk Na;
Ming, Ray

Publication type:

Article

Genetic mapping of quantitative trait loci controlling fruit size and shape in papaya.

Published in:

Molecular Breeding, 2012, v. 29, n. 2, p. 457, doi. 10.1007/s11032-011-9562-1

By:

Blas, Andrea;
Yu, Qingyi;
Veatch, Olivia;
Paull, Robert;
Moore, Paul;
Ming, Ray

Publication type:

Article

Evidence for Emergence of Sex-Determining Gene(s) in a Centromeric Region in Vasconcellea parviflora.

Published in:

Genetics, 2015, v. 199, n. 2, p. 413, doi. 10.1534/genetics.114.173021

By:

Iovene, Marina;
Qingyi Yu;
Ray Ming;
Jiming Jiang

Publication type:

Article

Construction of a Sequence-Tagged High-Density Genetic Map of Papaya for Comparative Structural and Evolutionary Genomics in Brassicales.

Published in:

Genetics, 2007, v. 177, n. 4, p. 2481, doi. 10.1534/genetics.107.081463

By:

Cuixia Chen;
Qingyi Yu;
Shaobin Hou;
Yingjun Li;
Eustice, Moriah;
Skelton, Rachel L.;
Veatch, Olivia;
Herdes, Rachel E.;
Diebold, Lauren;
Saw, Jimmy;
Yun Feng;
Wubin Qian;
Lee Bynum;
Lei Wang;
Moore, Paul H.;
Paull, Robert E.;
Alam, Maqsudul;
Ray Ming

Publication type:

Article

High-Density Linkage Mapping Revealed Suppression of Recombination at the Sex Determination Locus in Papaya.

Published in:

Genetics, 2004, v. 166, n. 1, p. 419

By:

Hao Ma;
Moore, Paul H.;
Liu, Zhiyong;
Kim, Minna S.;
Qingyi Yu, Minna S.;
Fitch, Maureen M.M.;
Sekioka, Terry;
Paterson, Andrew H.;
Ming, Ray

Publication type:

Article

Comparative Analysis of Homologous Sequences of Saccharum officinarum and Saccharum spontaneum Reveals Independent Polyploidization Events.

Published in:

Frontiers in Plant Science, 2018, p. N.PAG, doi. 10.3389/fpls.2018.01414

By:

Sharma, Anupma;
Song, Jinjin;
Lin, Qingfan;
Singh, Ratnesh;
Ramos, Ninfa;
Wang, Kai;
Zhang, Jisen;
Ming, Ray;
Yu, Qingyi

Publication type:

Article

An Overview of Molecular Advances in Zoysiagrass.

Published in:

Crop Science, 2017, v. 57, p. S-73, doi. 10.2135/cropsci2016.09.0822

By:

Chandra, Ambika;
Milla-Lewis, Susana;
Qingyi Yu

Publication type:

Article

Genome of papaya, a fast growing tropical fruit tree.

Published in:

Tree Genetics & Genomes, 2012, v. 8, n. 3, p. 445, doi. 10.1007/s11295-012-0490-y

By:

Ming, Ray;
Yu, Qingyi;
Moore, Paul;
Paull, Robert;
Chen, Nancy;
Wang, Ming-Li;
Zhu, Yun;
Schuler, Mary;
Jiang, Jiming;
Paterson, Andrew

Publication type:

Article

Evolution and expression of the fructokinase gene family in Saccharum.

Published in:

BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3535-7

By:

Yihong Chen;
Qing Zhang;
Weichang Hu;
Xingtan Zhang;
Liming Wang;
Xiuting Hua;
Qingyi Yu;
Ray Ming;
Jisen Zhang

Publication type:

Article