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Progress in methodologies and quality‐control strategies in protein cross‐linking mass spectrometry.
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- Proteomics, 2021, v. 21, n. 23/24, p. 1, doi. 10.1002/pmic.202100145
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- Article
In‐depth and 3‐dimensional exploration of the budding yeast phosphoproteome.
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- EMBO Reports, 2021, v. 22, n. 2, p. 1, doi. 10.15252/embr.202051121
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- Article
Loss of TMEM106B and PGRN leads to severe lysosomal abnormalities and neurodegeneration in mice.
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- EMBO Reports, 2020, v. 21, n. 10, p. 1, doi. 10.15252/embr.202050219
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- Article
Regulatory network features in Listeria monocytogenes--changing the way we talk.
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- Frontiers in Cellular & Infection Microbiology, 2014, v. 4, n. 2, p. 1, doi. 10.3389/fcimb.2014.00014
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- Article
Network medicine links SARS-CoV-2/COVID-19 infection to brain microvascular injury and neuroinflammation in dementia-like cognitive impairment.
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- Alzheimer's Research & Therapy, 2021, v. 13, n. 1, p. 1, doi. 10.1186/s13195-021-00850-3
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- Article
ASYMPTOTIC EXPANSION AND SUPERCONVERGENCE FOR TRIANGULAR LINEAR FINITE ELEMENT ON A CLASS OF TYPICAL MESH.
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- International Journal of Numerical Analysis & Modeling, 2012, v. 9, n. 4, p. 892
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- Article
Curdepsidones B–G, Six Depsidones with Anti-Inflammatory Activities from the Marine-Derived Fungus Curvularia sp. IFB-Z10.
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- Marine Drugs, 2019, v. 17, n. 5, p. 266, doi. 10.3390/md17050266
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- Article
ENCAPP: elastic-net-based prognosis prediction and biomarker discovery for human cancers.
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- BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1465-9
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- Article
Genome-wide functional annotation and structural verification of metabolic ORFeome of Chlamydomonas reinhardtii.
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- BMC Genomics, 2011, v. 12, p. 1, doi. 10.1186/1471-2164-12-S1-S4
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- Article
A Difference Scheme and Its Error Analysis for a Poisson Equation with Nonlocal Boundary Conditions.
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- Complexity, 2020, p. 1, doi. 10.1155/2020/6329404
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- Article
A multifaceted role of progranulin in regulating amyloid-beta dynamics and responses.
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- Life Science Alliance, 2021, v. 4, n. 7, p. 1, doi. 10.26508/lsa.202000874
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- Article
Aging-related cell type-specific pathophysiologic immune responses that exacerbate disease severity in aged COVID-19 patients.
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- Aging Cell, 2022, v. 21, n. 2, p. 1, doi. 10.1111/acel.13544
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- Article
Handcuffing intrinsically disordered regions in Mlh1–Pms1 disrupts mismatch repair.
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- Nucleic Acids Research, 2021, v. 49, n. 16, p. 9327, doi. 10.1093/nar/gkab694
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- Article
GeMSTONE: orchestrated prioritization of human germline mutations in the cloud.
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- Nucleic Acids Research, 2017, v. 45, n. W1, p. W207, doi. 10.1093/nar/gkx398
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- Article
Bayesian Modeling of the Yeast SH3 Domain Interactome Predicts Spatiotemporal Dynamics of Endocytosis Proteins.
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- PLoS Biology, 2009, v. 7, n. 10, p. 1, doi. 10.1371/journal.pbio.1000218
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- Article
CART cell therapy for prostate cancer: status and promise.
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- OncoTargets & Therapy, 2019, v. 12, p. 391, doi. 10.2147/OTT.S185556
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- Article
iRegNet3D: three-dimensional integrated regulatory network for the genomic analysis of coding and non-coding disease mutations.
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- Genome Biology, 2017, v. 18, p. 1, doi. 10.1186/s13059-016-1138-2
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- Article
Predicting Cancer Prognosis Using Functional Genomics Data Sets.
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- Cancer Informatics, 2014, n. 13, p. 85, doi. 10.4137/CIN.S14064
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- Article
Target Essentiality and Centrality Characterize Drug Side Effects.
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- PLoS Computational Biology, 2013, v. 9, n. 7, p. 1, doi. 10.1371/journal.pcbi.1003119
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- Article
The Importance of Bottlenecks in Protein Networks: Correlation with Gene Essentiality and Expression Dynamics.
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- PLoS Computational Biology, 2007, v. 3, n. 4, p. e59, doi. 10.1371/journal.pcbi.0030059
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- Article
SAAMBE-SEQ: a sequence-based method for predicting mutation effect on protein–protein binding affinity.
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- Bioinformatics, 2021, v. 37, n. 7, p. 992, doi. 10.1093/bioinformatics/btaa761
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- Article
Revealing new therapeutic opportunities through drug target prediction: a class imbalance-tolerant machine learning approach.
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- Bioinformatics, 2020, v. 36, n. 16, p. 4490, doi. 10.1093/bioinformatics/btaa495
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- Article
BISQUE: locus- and variant-specific conversion of genomic, transcriptomic and proteomic database identifiers.
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- Bioinformatics, 2016, v. 32, n. 10, p. 1598, doi. 10.1093/bioinformatics/btw043
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- Article
Cross-Species Protein Interactome Mapping Reveals Species-Specific Wiring of Stress Response Pathways.
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- Science Signaling, 2013, v. 6, n. 276, p. 1, doi. 10.1126/scisignal.2003350
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- Article
Computational analysis of membrane proteins: genomic occurrence, structure prediction and helix interactions.
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- Quarterly Reviews of Biophysics, 2004, v. 37, n. 2, p. 121, doi. 10.1017/S003358350400397X
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- Article
Edgetic perturbation models of human inherited disorders.
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- Molecular Systems Biology, 2009, v. 5, n. 1, p. 321, doi. 10.1038/msb.2009.80
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- Article
A Massively Parallel Pipeline to Clone DNA Variants and Examine Molecular Phenotypes of Human Disease Mutations.
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- PLoS Genetics, 2014, v. 10, n. 12, p. 1, doi. 10.1371/journal.pgen.1004819
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- Article
Leveraging genetic interactions for adverse drug-drug interaction prediction.
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- PLoS Computational Biology, 2019, v. 15, n. 5, p. 1, doi. 10.1371/journal.pcbi.1007068
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- Article
INstruct: a database of high-quality 3D structurally resolved protein interactome networks.
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- Bioinformatics, 2013, v. 29, n. 12, p. 1577, doi. 10.1093/bioinformatics/btt181
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- Article
Genome-scale analysis of interaction dynamics reveals organization of biological networks.
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- Bioinformatics, 2012, v. 28, n. 14, p. 1873, doi. 10.1093/bioinformatics/bts283
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- Article
Total ancestry measure: quantifying the similarity in tree-like classification, with genomic applications.
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- Bioinformatics, 2007, v. 23, n. 16, p. 2163, doi. 10.1093/bioinformatics/btm291
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- Article
The tYNA platform for comparative interactomics: a web tool for managing, comparing and mining multiple networks.
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- Bioinformatics, 2007, v. 23, n. 8, p. 1048, doi. 10.1093/bioinformatics/btm099
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- Article
The tYNA platform for comparative interactomics: a web tool for managing, comparing and mining multiple networks.
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- Bioinformatics, 2006, v. 22, n. 23, p. 2968, doi. 10.1093/bioinformatics/btl488
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- Article
Predicting interactions in protein networks by completing defective cliques.
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- Bioinformatics, 2006, v. 22, n. 7, p. 823, doi. 10.1093/bioinformatics/btl014
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- Article
Human MLH1/3 variants causing aneuploidy, pregnancy loss, and premature reproductive aging.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25028-1
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- Article
Error Estimates and Superconvergence of a High-Accuracy Difference Scheme for a Parabolic Inverse Problem with Unknown Boundary Conditions.
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- Numerical Mathematics: Theory, Methods & Applications, 2019, v. 12, n. 4, p. 1119, doi. 10.4208/nmtma.OA-2018-0019
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- Article
Superconvergence and Asymptotic Expansions for Bilinear Finite Volume Element Approximations.
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- Numerical Mathematics: Theory, Methods & Applications, 2013, v. 6, n. 2, p. 408, doi. 10.4208/nmtma.2013.1127nm
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- Article
A comparison of experimental assays and analytical methods for genome-wide identification of active enhancers.
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- Nature Biotechnology, 2022, v. 40, n. 7, p. 1056, doi. 10.1038/s41587-022-01211-7
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- Article
Detecting overlapping protein complexes in protein-protein interaction networks.
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- Nature Methods, 2012, v. 9, n. 5, p. 471, doi. 10.1038/nmeth.1938
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- Article
Next-generation sequencing to generate interactome datasets.
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- Nature Methods, 2011, v. 8, n. 6, p. 478, doi. 10.1038/nmeth.1597
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- Article
Addendum: Literature-curated protein interaction datasets.
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- 2009
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- Correction notice
Literature-curated protein interaction datasets.
- Published in:
- Nature Methods, 2009, v. 6, n. 1, p. 39, doi. 10.1038/nmeth.1284
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- Article
An experimentally derived confidence score for binary protein-protein interactions.
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- Nature Methods, 2009, v. 6, n. 1, p. 91, doi. 10.1038/nmeth.1281
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- Article
Constructions of Normal Extended Functions for Elliptic Interface Problems.
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- IAENG International Journal of Applied Mathematics, 2017, v. 47, n. 3, p. 271
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- Publication type:
- Article
GRAM: A GeneRAlized Model to predict the molecular effect of a non-coding variant in a cell-type specific manner.
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- PLoS Genetics, 2019, v. 15, n. 8, p. 1, doi. 10.1371/journal.pgen.1007860
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- Publication type:
- Article
Propionibacterium acnes related anti-inflammation and skin hydration activities of madecassoside, a pentacyclic triterpene saponin from Centella asiatica.
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- Bioscience, Biotechnology & Biochemistry, 2019, v. 83, n. 3, p. 561, doi. 10.1080/09168451.2018.1547627
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- Article
mutation3D: Cancer Gene Prediction Through Atomic Clustering of Coding Variants in the Structural Proteome.
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- Human Mutation, 2016, v. 37, n. 5, p. 447, doi. 10.1002/humu.22963
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- Publication type:
- Article
Elucidating Common Structural Features of Human Pathogenic Variations Using Large-Scale Atomic-Resolution Protein Networks.
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- Human Mutation, 2014, v. 35, n. 5, p. 585, doi. 10.1002/humu.22534
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- Article
A Raviart-Thomas mixed finite element scheme for the two-dimensional three-temperature heat conduction problems.
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- International Journal for Numerical Methods in Engineering, 2017, v. 111, n. 10, p. 983, doi. 10.1002/nme.5492
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- Publication type:
- Article
De novo missense variants disrupting protein–protein interactions affect risk for autism through gene co-expression and protein networks in neuronal cell types.
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- Molecular Autism, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13229-020-00386-7
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- Article