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A unique peptide-based pharmacophore identifies an inhibitory compound against the A-subunit of Shiga toxin.
Published in:
Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-15316-1
By:
- Watanabe-Takahashi, Miho;
- Senda, Miki;
- Yoshino, Ryunosuke;
- Hibino, Masahiro;
- Hama, Shinichiro;
- Terada, Tohru;
- Shimizu, Kentaro;
- Senda, Toshiya;
- Nishikawa, Kiyotaka
Publication type:
Article
Inverse Mixed-Solvent Molecular Dynamics for Visualization of the Residue Interaction Profile of Molecular Probes.
Published in:
International Journal of Molecular Sciences, 2022, v. 23, n. 9, p. 4749, doi. 10.3390/ijms23094749
By:
- Yanagisawa, Keisuke;
- Yoshino, Ryunosuke;
- Kudo, Genki;
- Hirokawa, Takatsugu
Publication type:
Article
The transcriptional corepressor CtBP2 serves as a metabolite sensor orchestrating hepatic glucose and lipid homeostasis.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-26638-5
By:
- Sekiya, Motohiro;
- Kainoh, Kenta;
- Sugasawa, Takehito;
- Yoshino, Ryunosuke;
- Hirokawa, Takatsugu;
- Tokiwa, Hiroaki;
- Nakano, Shogo;
- Nagatoishi, Satoru;
- Tsumoto, Kouhei;
- Takeuchi, Yoshinori;
- Miyamoto, Takafumi;
- Matsuzaka, Takashi;
- Shimano, Hitoshi
Publication type:
Article
Molecular action of larvicidal flavonoids on ecdysteroidogenic glutathione S-transferase Noppera-bo in Aedes aegypti.
Published in:
BMC Biology, 2022, v. 20, n. 1, p. 1, doi. 10.1186/s12915-022-01233-2
By:
- Inaba, Kazue;
- Ebihara, Kana;
- Senda, Miki;
- Yoshino, Ryunosuke;
- Sakuma, Chisako;
- Koiwai, Kotaro;
- Takaya, Daisuke;
- Watanabe, Chiduru;
- Watanabe, Akira;
- Kawashima, Yusuke;
- Fukuzawa, Kaori;
- Imamura, Riyo;
- Kojima, Hirotatsu;
- Okabe, Takayoshi;
- Uemura, Nozomi;
- Kasai, Shinji;
- Kanuka, Hirotaka;
- Nishimura, Takashi;
- Watanabe, Kodai;
- Inoue, Hideshi
Publication type:
Article
Identification of potential inhibitors based on compound proposal contest: Tyrosine-protein kinase Yes as a target.
Published in:
Scientific Reports, 2015, p. 17209, doi. 10.1038/srep17209
By:
- Chiba, Shuntaro;
- Ikeda, Kazuyoshi;
- Ishida, Takashi;
- Gromiha, M. Michael;
- Taguchi, Y-h.;
- Iwadate, Mitsuo;
- Umeyama, Hideaki;
- Hsin, Kun-Yi;
- Kitano, Hiroaki;
- Yamamoto, Kazuki;
- Sugaya, Nobuyoshi;
- Kato, Koya;
- Okuno, Tatsuya;
- Chikenji, George;
- Mochizuki, Masahiro;
- Yasuo, Nobuaki;
- Yoshino, Ryunosuke;
- Yanagisawa, Keisuke;
- Ban, Tomohiro;
- Teramoto, Reiji
Publication type:
Article
Pharmacophore Modeling for Anti-Chagas Drug Design Using the Fragment Molecular Orbital Method.
Published in:
PLoS ONE, 2015, v. 10, n. 5, p. 1, doi. 10.1371/journal.pone.0125829
By:
- Yoshino, Ryunosuke;
- Yasuo, Nobuaki;
- Inaoka, Daniel Ken;
- Hagiwara, Yohsuke;
- Ohno, Kazuki;
- Orita, Masaya;
- Inoue, Masayuki;
- Shiba, Tomoo;
- Harada, Shigeharu;
- Honma, Teruki;
- Balogun, Emmanuel Oluwadare;
- da Rocha, Josmar Rodrigues;
- Montanari, Carlos Alberto;
- Kita, Kiyoshi;
- Sekijima, Masakazu
Publication type:
Article
A prospective compound screening contest identified broader inhibitors for Sirtuin 1.
Published in:
Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-019-55069-y
By:
- Chiba, Shuntaro;
- Ohue, Masahito;
- Gryniukova, Anastasiia;
- Borysko, Petro;
- Zozulya, Sergey;
- Yasuo, Nobuaki;
- Yoshino, Ryunosuke;
- Ikeda, Kazuyoshi;
- Shin, Woong-Hee;
- Kihara, Daisuke;
- Iwadate, Mitsuo;
- Umeyama, Hideaki;
- Ichikawa, Takaaki;
- Teramoto, Reiji;
- Hsin, Kun-Yi;
- Gupta, Vipul;
- Kitano, Hiroaki;
- Sakamoto, Mika;
- Higuchi, Akiko;
- Miura, Nobuaki
Publication type:
Article
Molecular Dynamics Simulation reveals the mechanism by which the Influenza Cap-dependent Endonuclease acquires resistance against Baloxavir marboxil.
Published in:
Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-53945-1
By:
- Yoshino, Ryunosuke;
- Yasuo, Nobuaki;
- Sekijima, Masakazu
Publication type:
Article
Non-steroidal inhibitors of Drosophila melanogaster steroidogenic glutathione S-transferase Noppera-bo.
Published in:
Journal of Pesticide Science, 2021, v. 46, n. 1, p. 75, doi. 10.1584/jpestics.D20-072
By:
- Kotaro Koiwai;
- Kana Morohashi;
- Kazue Inaba;
- Kana Ebihara;
- Hirotatsu Kojima;
- Takayoshi Okabe;
- Ryunosuke Yoshino;
- Takatsugu Hirokawa;
- Taiki Nampo;
- Yuuta Fujikawa;
- Hideshi Inoue;
- Fumiaki Yumoto;
- Toshiya Senda;
- Ryusuke Niwa
Publication type:
Article
Identification of key interactions between SARS-CoV-2 main protease and inhibitor drug candidates.
Published in:
Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-69337-9
By:
- Yoshino, Ryunosuke;
- Yasuo, Nobuaki;
- Sekijima, Masakazu
Publication type:
Article
Compound property enhancement by virtual compound synthesis.
Published in:
Journal of Bioinformatics & Computational Biology, 2018, v. 16, n. 3, p. N.PAG, doi. 10.1142/S0219720018400164
By:
- Arai, Naoki;
- Yoshikawa, Shunsuke;
- Yasuo, Nobuaki;
- Yoshino, Ryunosuke;
- Sekijima, Masakazu
Publication type:
Article
Temperature–pressure shuffling outlier flooding method enhances the conformational sampling of proteins.
Published in:
Journal of Computational Chemistry, 2019, v. 40, n. 15, p. 1530, doi. 10.1002/jcc.25806
By:
- Harada, Ryuhei;
- Yoshino, Ryunosuke;
- Nishizawa, Hiroaki;
- Shigeta, Yasuteru
Publication type:
Article

Found: 12