Works by Yonghui Wu

Results: 160

Microarray profiling shows distinct differences between primary tumors and commonly used preclinical models in hepatocellular carcinoma.

Published in:

2015

By:

Weining Wang;
Gopalakrishna Iyer, N.;
Hsien Ts'ung Tay;
Yonghui Wu;
Lim, Tony K. H.;
Lin Zheng;
In Chin Song;
Chee Keong Kwoh;
Hung Huynh;
Tan, Patrick O. B.;
Chow, Pierce K. H.;
Wang, Weining;
Iyer, N Gopalakrishna;
Tay, Hsien Ts'ung;
Wu, Yonghui;
Zheng, Lin;
Song, In Chin;
Kwoh, Chee Keong;
Huynh, Hung

Publication type:

journal article

PIE: A prior knowledge guided integrated likelihood estimation method for bias reduction in association studies using electronic health records data.

Published in:

2018

By:

Jing Huang;
Rui Duan;
Hubbard, Rebecca A.;
Yonghui Wu;
Moore, Jason H.;
Hua Xu;
Yong Chen;
Huang, Jing;
Duan, Rui;
Wu, Yonghui;
Xu, Hua;
Chen, Yong

Publication type:

journal article

CLAMP - a toolkit for efficiently building customized clinical natural language processing pipelines.

Published in:

2018

By:

Soysal, Ergin;
Jingqi Wang;
Min Jiang;
Yonghui Wu;
Pakhomov, Serguei;
Hongfang Liu;
Hua Xu;
Wang, Jingqi;
Jiang, Min;
Wu, Yonghui;
Liu, Hongfang;
Xu, Hua

Publication type:

journal article

A long journey to short abbreviations: developing an open-source framework for clinical abbreviation recognition and disambiguation (CARD).

Published in:

2017

By:

Yonghui Wu;
Denny, Joshua C.;
Rosenbloom, S. Trent;
Miller, Randolph A.;
Giuse, Dario A.;
Lulu Wang;
Blanquicett, Carmelo;
Soysal, Ergin;
Jun Xu;
Hua Xu;
Wu, Yonghui;
Trent Rosenbloom, S;
Wang, Lulu;
Xu, Jun;
Xu, Hua

Publication type:

journal article

Extracting genetic alteration information for personalized cancer therapy from ClinicalTrials.gov.

Published in:

2016

By:

Jun Xu;
Hee-Jin Lee;
Jia Zeng;
Yonghui Wu;
Yaoyun Zhang;
Liang-Chin Huang;
Johnson, Amber;
Holla, Vijaykumar;
Bailey, Ann M.;
Cohen, Trevor;
Meric-Bernstam, Funda;
Bernstam, Elmer V.;
Hua Xu;
Xu, Jun;
Lee, Hee-Jin;
Zeng, Jia;
Wu, Yonghui;
Zhang, Yaoyun;
Huang, Liang-Chin;
Xu, Hua

Publication type:

journal article

Entry Guidance for Hypersonic Glide Vehicles via Two-Phase hp-Adaptive Sequential Convex Programming.

Published in:

Aerospace (MDPI Publishing), 2025, v. 12, n. 6, p. 539, doi. 10.3390/aerospace12060539

By:

Liu, Xu;
Li, Xiang;
Zhang, Houjun;
Huang, Hao;
Wu, Yonghui

Publication type:

Article

Effects Study of CAD Technology on the Dissemination of Artistic Images Using Big Data.

Published in:

Computer-Aided Design & Applications, 2024, v. 21, p. 101, doi. 10.14733/cadaps.2024.S21.101-115

By:

Yonghui Wu;
Chen Zhang

Publication type:

Article

Sea dragon metabolome and lipidome unveil bioactive functional food candidates with sepsis therapeutic activities.

Published in:

NPJ Science of Food, 2025, v. 9, n. 1, p. 1, doi. 10.1038/s41538-025-00469-w

By:

Wu, Huixiang;
Li, Miaoyu;
Ge, Lijun;
Lu, Weibo;
Shen, Xuewei;
Zhang, Yu;
Wu, Zengyan;
Wang, Jianding;
Wu, Yonghui;
Mao, Huijuan;
Zhang, Jianliang;
Wang, Qingcheng;
Xue, Jing;
Shen, Qing;
Tu, Yuexing

Publication type:

Article

Ursolic acid induces apoptosis in nasopharyngeal carcinoma cells through the P53 signaling pathway: a network pharmacology and experimental validation study.

Published in:

Medical Oncology, 2025, v. 42, n. 6, p. 1, doi. 10.1007/s12032-025-02749-7

By:

Wang, Binya;
Huang, Keying;
Xiao, Jiale;
Tao, Yangyang;
Luo, Jingjing;
Wu, Yonghui;
Zhou, Sainan;
He, Yingchun;
He, Lan

Publication type:

Article

Clinical implications of miR-195 in cancer: mechanisms, potential applications, and therapeutic strategies.

Published in:

Journal of Cancer Research & Clinical Oncology, 2025, v. 151, n. 4, p. 1, doi. 10.1007/s00432-025-06195-w

By:

Xu, Shuli;
He, Lan;
Chen, Yan;
Lin, Ting;
Tang, Le;
Wu, Yonghui;
He, Yingchun;
Sun, Xiaofeng

Publication type:

Article

Clinical implications of miR-195 in cancer: mechanisms, potential applications, and therapeutic strategies.

Published in:

Journal of Cancer Research & Clinical Oncology, 2025, v. 151, n. 4, p. 1, doi. 10.1007/s00432-025-06195-w

By:

Xu, Shuli;
He, Lan;
Chen, Yan;
Lin, Ting;
Tang, Le;
Wu, Yonghui;
He, Yingchun;
Sun, Xiaofeng

Publication type:

Article

Regulation of the Oxidase Mimetic Activity of Ceria Nanoparticles by Buffer Composition.

Published in:

Chemistry - A European Journal, 2023, v. 29, n. 29, p. 1, doi. 10.1002/chem.202204071

By:

Yonghui Wu;
Lu Yang;
Qianqian Wu;
Qingshan Liu;
Ling Zou;
Xiaochao Yang;
Keyong Tang

Publication type:

Article

Single‐cell RNA sequencing reveals microenvironmental infiltration in non‐small cell lung cancer with different responses to immunotherapy.

Published in:

Journal of Gene Medicine, 2024, v. 26, n. 9, p. 1, doi. 10.1002/jgm.3736

By:

Hu, Xinnan;
Wu, Yonghui;
Wang, Lixin;
Yang, Fujun;
Ye, Lingyun;
Chen, Xiaoxia;
Song, Xiao;
Wei, Ping

Publication type:

Article

Combining Federated Machine Learning and Qualitative Methods to Investigate Novel Pediatric Asthma Subtypes: Protocol for a Mixed Methods Study.

Published in:

JMIR Research Protocols, 2024, v. 13, p. 1, doi. 10.2196/57981

By:

Xu, Jie;
Talankar, Sankalp;
Pan, Jinqian;
Harmon, Ira;
Wu, Yonghui;
Fedele, David A;
Brailsford, Jennifer;
Fishe, Jennifer Noel

Publication type:

Article

Noninvasive Diagnosis of Nonalcoholic Steatohepatitis and Advanced Liver Fibrosis Using Machine Learning Methods: Comparative Study With Existing Quantitative Risk Scores.

Published in:

JMIR Medical Informatics, 2022, v. 10, n. 6, p. 1, doi. 10.2196/36997

By:

Yonghui Wu;
Xi Yang;
Morris, Heather L.;
Gurka, Matthew J.;
Shenkman, Elizabeth A.;
Cusi, Kenneth;
Bril, Fernando;
Donahoo, William T.

Publication type:

Article

Purine metabolite inosine induced by transforming growth factor‑β promotes epithelial‑mesenchymal transition in colorectal cancer.

Published in:

Oncology Letters, 2024, v. 28, n. 3, p. N.PAG, doi. 10.3892/ol.2024.14549

By:

Hu, Weimin;
Cheng, Ling;
Zhao, Jian;
Wu, Yonghui;
Lin, Ying;
Yin, Jun

Publication type:

Article

Myeloid and plasmacytoid dendritic cell combined vaccines loaded with heat-treated tumor cell lysates enhance antitumor activity in murine lung cancer.

Published in:

Oncology Letters, 2021, v. 21, n. 2, p. 1, doi. 10.3892/ol.2020.12351

By:

HUIGUO CHEN;
JIANFENG TAN;
XIAOJUN LI;
HUI LI;
WEIBIN WU;
YONGHUI WU;
JIAN ZHANG;
LIJIA GU

Publication type:

Article

Thermal Maturity Constraint Effect and Development Model of Shale Pore Structure: A Case Study of Longmaxi Formation Shale in Southern Sichuan Basin, China.

Published in:

Minerals (2075-163X), 2024, v. 14, n. 2, p. 163, doi. 10.3390/min14020163

By:

Shi, Xuewen;
Wu, Wei;
Xu, Liang;
Yin, Yingzi;
Yang, Yuran;
Liu, Jia;
Yang, Xue;
Li, Yanyou;
Wu, Qiuzi;
Zhong, Kesu;
Wu, Yonghui

Publication type:

Article

Characteristics and Influencing Factors of Multi-Scale Pore Structure Heterogeneity of Lacustrine Shale in the Gaoyou Sag, Eastern China.

Published in:

Minerals (2075-163X), 2023, v. 13, n. 3, p. 359, doi. 10.3390/min13030359

By:

Li, Peng;
Gong, Houjian;
Jiang, Zhenxue;
Zhang, Fan;
Liang, Zhikai;
Wang, Zipeng;
Wu, Yonghui;
Shao, Xindi

Publication type:

Article

An analytical model for multiple fractured shale gas wells considering fracture networks and dynamic gas properties.

Published in:

Arabian Journal of Geosciences, 2018, v. 11, n. 18, p. 1, doi. 10.1007/s12517-018-3921-8

By:

Xue, Yongchao;
Wu, Yonghui;
Cheng, Linsong;
Huang, Shijun;
Ai, Shuang;
Yang, Yanwei

Publication type:

Article

Navigating the digital frontier: Challenges and solutions for Dajia Insurance Group Limited Liability Company in the era of digital transformation.

Published in:

NURTURE: Journal of Pakistan Home Economics Association, 2025, v. 19, n. 1, p. 83, doi. 10.55951/nurture.v19i1.956

By:

Wu Yonghui

Publication type:

Article

Genetic and bioinformatic analyses of the expression and function of PI3K regulatory subunit PIK3R3 in an Asian patient gastric cancer library.

Published in:

BMC Medical Genomics, 2012, v. 5, n. 1, p. 34, doi. 10.1186/1755-8794-5-34

By:

Zhou, Jin;
Chen, Geng Bo;
Tang, Yew Chung;
Sinha, Rohit Anthony;
Wu, Yonghui;
Yap, Chui Sun;
Wang, Guihua;
Hu, Junbo;
Xia, Xianmin;
Tan, Patrick;
Goh, Liang Kee;
Yen, Paul Michael

Publication type:

Article

Rare chondroblastoma of the 6th left rib, video-assisted thoracoscopy resected: one case report and literature review.

Published in:

2021

By:

Wu, Yonghui;
Guan, Jiexia;
Zhang, Kai;
Chen, Huiguo;
Wu, Weibin;
Zhang, Jian

Publication type:

journal article

Verification of a High-Resolution Model Forecast Using Airborne Doppler Radar Analysis during the Rapid Intensification of Hurricane Guillermo.

Published in:

Journal of Applied Meteorology & Climatology, 2010, v. 49, n. 4, p. 807, doi. 10.1175/2009JAMC2182.1

By:

Zou, X.;
Yonghui Wu;
Ray, Peter Sawin

Publication type:

Article

Identifying the status of genetic lesions in cancer clinical trial documents using machine learning.

Published in:

BMC Genomics, 2012, v. 13, n. Suppl 8, p. 1, doi. 10.1186/1471-2164-13-S8-S21

By:

Yonghui Wu;
Levy, Mia A.;
Micheel, Christine M.;
Paul Yeh;
Buzhou Tang;
Cantrell, Michael J.;
Cooreman, Stacy M.;
Hua Xu

Publication type:

Article

Development and implementation of high-throughput SNPgenotyping in barley.

Published in:

BMC Genomics, 2009, v. 10, p. 582, doi. 10.1186/1471-2164-10-582

By:

Close, Timothy J.;
Bhat, Prasanna R.;
Lonardi, Stefano;
Yonghui Wu;
Rostoks, Nils;
Ramsay, Luke;
Druka, Arnis;
Stein, Nils;
Svensson, Jan T.;
Wanamaker, Steve;
Bozdag, Serdar;
Roose, Mikeal L.;
Moscou, Matthew J.;
Shiaoman Chao;
Varshney, Rajeev K.;
Szűcs, Péter;
Sato, Kazuhiro;
Hayes, Patrick M.;
Matthews, David E.;
Kleinhofs, Andris

Publication type:

Article

Large language models as decision aids in neuro-oncology: a review of shared decision-making applications.

Published in:

Journal of Cancer Research & Clinical Oncology, 2024, v. 150, n. 3, p. 1, doi. 10.1007/s00432-024-05673-x

By:

Lawson McLean, Aaron;
Wu, Yonghui;
Lawson McLean, Anna C.;
Hristidis, Vagelis

Publication type:

Article

Medical foundation large language models for comprehensive text analysis and beyond.

Published in:

NPJ Digital Medicine, 2025, v. 8, n. 1, p. 1, doi. 10.1038/s41746-025-01533-1

By:

Xie, Qianqian;
Chen, Qingyu;
Chen, Aokun;
Peng, Cheng;
Hu, Yan;
Lin, Fongci;
Peng, Xueqing;
Huang, Jimin;
Zhang, Jeffrey;
Keloth, Vipina;
Zhou, Xinyu;
Qian, Lingfei;
He, Huan;
Shung, Dennis;
Ohno-Machado, Lucila;
Wu, Yonghui;
Xu, Hua;
Bian, Jiang

Publication type:

Article

Deep learning for identifying personal and family history of suicidal thoughts and behaviors from EHRs.

Published in:

NPJ Digital Medicine, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s41746-024-01266-7

By:

Adekkanattu, Prakash;
Furmanchuk, Al'ona;
Wu, Yonghui;
Pathak, Aman;
Patra, Braja Gopal;
Bost, Sarah;
Morrow, Destinee;
Wang, Grace Hsin-Min;
Yang, Yuyang;
Forrest, Noah James;
Luo, Yuan;
Walunas, Theresa L.;
Lo-Ciganic, Weihsuan;
Gelad, Walid;
Bian, Jiang;
Bao, Yuhua;
Weiner, Mark;
Oslin, David;
Pathak, Jyotishman

Publication type:

Article

Newly diagnosed cardiovascular disease in patients treated with immune checkpoint inhibitors: a retrospective analysis of patients at an academic tertiary care center.

Published in:

Cardio-Oncology, 2021, v. 7, n. 1, p. 1, doi. 10.1186/s40959-021-00097-9

By:

Waheed, Nida;
Fradley, Michael G.;
DeRemer, David L.;
Mahmoud, Ahmad;
Shah, Chintan P.;
Langaee, Taimour Y.;
Lipori, Gloria P.;
March, Keith;
Pepine, Carl J.;
Cooper-DeHoff, Rhonda M.;
Wu, Yonghui;
Gong, Yan

Publication type:

Article

A Semianalytical Model for Analyzing the Infill Well-Caused Fracture Interference from Shale Gas Reservoirs.

Published in:

Geofluids, 2021, p. 1, doi. 10.1155/2021/1877778

By:

Fang, Sidong;
Wu, Yonghui;
Dai, Cheng;
Ma, Liqiang;
Liu, Hua

Publication type:

Article

Acanthopanax senticosus improves cognitive impairment in Alzheimer's disease by promoting the phosphorylation of the MAPK signaling pathway.

Published in:

Frontiers in Immunology, 2024, p. 1, doi. 10.3389/fimmu.2024.1383464

By:

Zhichun Zhang;
Yonghui Wu;
Dan Shi;
Chanyu Jiang;
Hengyan Cao;
Fengyi Jiang;
Xiaomin Bao;
Yan Shen;
Xiao Shi

Publication type:

Article

Developing an automated algorithm for identification of children and adolescents with diabetes using electronic health records from the OneFlorida+ clinical research network.

Published in:

Diabetes, Obesity & Metabolism, 2025, v. 27, n. 1, p. 102, doi. 10.1111/dom.15987

By:

Li, Piaopiao;
Spector, Eliot;
Alkhuzam, Khalid;
Patel, Rahul;
Donahoo, William T.;
Bost, Sarah;
Lyu, Tianchen;
Wu, Yonghui;
Hogan, William;
Prosperi, Mattia;
Dixon, Brian E.;
Dabelea, Dana;
Utidjian, Levon H.;
Crume, Tessa L.;
Thorpe, Lorna;
Liese, Angela D.;
Schatz, Desmond A.;
Atkinson, Mark A.;
Haller, Michael J.;
Shenkman, Elizabeth A.

Publication type:

Article

Characteristics of thin-layer drying and rehydration of nata de coco.

Published in:

International Journal of Food Science & Technology, 2011, v. 46, n. 7, p. 1438, doi. 10.1111/j.1365-2621.2011.02642.x

By:

Fan, Huiping;
Wu, Yonghui;
Hu, Xiaosong;
Wu, Jihong;
Liao, Xiaojun

Publication type:

Article

Radiomics analysis based on CT for predicting lymph node metastasis and prognosis in duodenal papillary carcinoma.

Published in:

Insights into Imaging, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13244-024-01732-6

By:

Tang, Chao-Tao;
Wu, Yonghui;
Jiang, Longzhou;
Zeng, Chun-Yan;
Chen, You-Xiang

Publication type:

Article

PORCN Moonlights in a Wnt-Independent Pathway That Regulates Cancer Cell Proliferation.

Published in:

PLoS ONE, 2012, v. 7, n. 4, p. 1, doi. 10.1371/journal.pone.0034532

By:

Covey, Tracy M.;
Kaur, Simran;
Tina Tan Ong;
Proffitt, Kyle D.;
Yonghui Wu;
Patrick Tan;
Virshup, David M.

Publication type:

Article

Organizational innovation culture and firms' new product performance in two emerging markets: The moderating effects of institutional environments and organizational cohesion.

Published in:

Journal of Management & Organization, 2021, v. 27, n. 5, p. 972, doi. 10.1017/jmo.2019.8

By:

Xie, Xuemei;
Wu, Yonghui;
Xie, Peihong;
Yu, Xiaoyu;
Wang, Hongwei

Publication type:

Article

A Sedimentary Facies-Based Method to Control Water Hazards in the Roof of Deep Jurassic Coals.

Published in:

Mine Water & the Environment, 2023, v. 42, n. 2, p. 240, doi. 10.1007/s10230-023-00930-w

By:

Wang, Yang;
Wu, Yonghui;
Ge, Qin;
Pu, Zhiguo;
Liu, Jinhui;
Zhang, Yanhong;
Xie, Xiangjian

Publication type:

Article

Barriers and Facilitators of Obtaining Social Determinants of Health of Patients With Cancer Through the Electronic Health Record Using Natural Language Processing Technology: Qualitative Feasibility Study With Stakeholder Interviews.

Published in:

JMIR Formative Research, 2022, v. 6, n. 12, p. 1, doi. 10.2196/43059

By:

Alpert, Jordan;
Hyehyun (Julia) Kim;
McDonnell, Cara;
Yi Guo;
George, Thomas J.;
Jiang Bian;
Yonghui Wu

Publication type:

Article

Topology optimization of constrained layer damping plates with frequency- and temperature-dependent viscoelastic core via parametric level set method.

Published in:

Mechanics of Advanced Materials & Structures, 2022, v. 29, n. 1, p. 154, doi. 10.1080/15376494.2021.1938302

By:

Zhang, Dongdong;
Wu, Yonghui;
Lu, Xi;
Zheng, Ling

Publication type:

Article

Generative large language models are all-purpose text analytics engines: text-to-text learning is all your need.

Published in:

Journal of the American Medical Informatics Association, 2024, v. 31, n. 9, p. 1892, doi. 10.1093/jamia/ocae078

By:

Peng, Cheng;
Yang, Xi;
Chen, Aokun;
Yu, Zehao;
Smith, Kaleb E;
Costa, Anthony B;
Flores, Mona G;
Bian, Jiang;
Wu, Yonghui

Publication type:

Article

The role of health system penetration rate in estimating the prevalence of type 1 diabetes in children and adolescents using electronic health records.

Published in:

Journal of the American Medical Informatics Association, 2024, v. 31, n. 1, p. 165, doi. 10.1093/jamia/ocad194

By:

Li, Piaopiao;
Lyu, Tianchen;
Alkhuzam, Khalid;
Spector, Eliot;
Donahoo, William T;
Bost, Sarah;
Wu, Yonghui;
Hogan, William R;
Prosperi, Mattia;
Schatz, Desmond A;
Atkinson, Mark A;
Haller, Michael J;
Shenkman, Elizabeth A;
Guo, Yi;
Bian, Jiang;
Shao, Hui

Publication type:

Article

Clinical concept and relation extraction using prompt-based machine reading comprehension.

Published in:

Journal of the American Medical Informatics Association, 2023, v. 30, n. 9, p. 1486, doi. 10.1093/jamia/ocad107

By:

Peng, Cheng;
Yang, Xi;
Yu, Zehao;
Bian, Jiang;
Hogan, William R;
Wu, Yonghui

Publication type:

Article

Extracting social determinants of health from electronic health records using natural language processing: a systematic review.

Published in:

2021

By:

Patra, Braja G;
Sharma, Mohit M;
Vekaria, Veer;
Adekkanattu, Prakash;
Patterson, Olga V;
Glicksberg, Benjamin;
Lepow, Lauren A;
Ryu, Euijung;
Biernacka, Joanna M;
Furmanchuk, Al'ona;
George, Thomas J;
Hogan, William;
Wu, Yonghui;
Yang, Xi;
Bian, Jiang;
Weissman, Myrna;
Wickramaratne, Priya;
Mann, J John;
Olfson, Mark;
Campion, Thomas R

Publication type:

journal article

Assessing the practice of data quality evaluation in a national clinical data research network through a systematic scoping review in the era of real-world data.

Published in:

2020

By:

Bian, Jiang;
Lyu, Tianchen;
Loiacono, Alexander;
Viramontes, Tonatiuh Mendoza;
Lipori, Gloria;
Guo, Yi;
Wu, Yonghui;
Prosperi, Mattia;
George, Thomas J;
Harle, Christopher A;
Shenkman, Elizabeth A;
Hogan, William

Publication type:

journal article

Clinical concept extraction using transformers.

Published in:

2020

By:

Yang, Xi;
Bian, Jiang;
Hogan, William R;
Wu, Yonghui

Publication type:

journal article

Identifying relations of medications with adverse drug events using recurrent convolutional neural networks and gradient boosting.

Published in:

2020

By:

Yang, Xi;
Bian, Jiang;
Fang, Ruogu;
Bjarnadottir, Ragnhildur I;
Hogan, William R;
Wu, Yonghui

Publication type:

journal article

A hybrid system for temporal information extraction from clinical text.

Published in:

Journal of the American Medical Informatics Association, 2013, v. 20, n. 5, p. 828, doi. 10.1136/amiajnl-2013-001635

By:

Buzhou Tang;
Yonghui Wu;
Min Jiang;
Yukun Chen;
Denny, Joshua C.;
Hua Xu

Publication type:

Article

Large-scale prediction of adverse drug reactions using chemical, biological, and phenotypic properties of drugs.

Published in:

2012

By:

Liu M;
Wu Y;
Chen Y;
Sun J;
Zhao Z;
Chen XW;
Matheny ME;
Xu H;
Liu, Mei;
Wu, Yonghui;
Chen, Yukun;
Sun, Jingchun;
Zhao, Zhongming;
Chen, Xue-wen;
Matheny, Michael Edwin;
Xu, Hua

Publication type:

journal article

Large-scale prediction of adverse drug reactions using chemical, biological, and phenotypic properties of drugs.

Published in:

Journal of the American Medical Informatics Association, 2012, v. 19, n. e1, p. e28, doi. 10.1136/amiajnl-2011-000699

By:

Mei Liu;
Yonghui Wu;
Yukun Chen;
Jingchun Sun;
Zhongming Zhao;
Xue-wen Chen;
Matheny, Michael Edwin;
Hua Xu

Publication type:

Article