Works by Yi, Soojin V
Results: 58
Functional conservation of sequence determinants at rapidly evolving regulatory regions across mammals.
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- PLoS Computational Biology, 2018, v. 14, n. 10, p. 1, doi. 10.1371/journal.pcbi.1006451
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- Article
Comparative studies of genomic and epigenetic factors influencing transcriptional variation in two insect species.
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- G3: Genes | Genomes | Genetics, 2022, v. 12, n. 11, p. 1, doi. 10.1093/g3journal/jkac230
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- Article
Effects of DNA Methylation and Chromatin State on Rates of Molecular Evolution in Insects.
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- G3: Genes | Genomes | Genetics, 2016, v. 6, n. 2, p. 357, doi. 10.1534/g3.115.023499
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- Article
Cell type-specific epigenetic links to schizophrenia risk in the brain.
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- Genome Biology, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s13059-019-1747-7
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- Article
Potential Role of DNA Methylation as a Driver of Plastic Responses to the Environment Across Cells, Organisms, and Populations.
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- Genome Biology & Evolution, 2024, v. 16, n. 2, p. 1, doi. 10.1093/gbe/evae022
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- Article
Lineage and Parent-of-Origin Effects in DNA Methylation of Honey Bees (Apis mellifera) Revealed by Reciprocal Crosses and Whole-Genome Bisulfite Sequencing.
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- Genome Biology & Evolution, 2020, v. 12, n. 8, p. 1482, doi. 10.1093/gbe/evaa133
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- Article
Dynamic molecular evolution of a supergene with suppressed recombination in white-throated sparrows.
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- eLife, 2022, p. 1, doi. 10.7554/eLife.79387
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- Article
What are the determinants of gene expression levels and breadths in the human genome?
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- Human Molecular Genetics, 2012, v. 21, n. 1, p. 46, doi. 10.1093/hmg/ddr436
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- Article
Genomic Landscape of Methylation Islands in Hymenopteran Insects.
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- Genome Biology & Evolution, 2018, v. 10, n. 10, p. 2766, doi. 10.1093/gbe/evy203
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- Article
Insights into Epigenome Evolution from Animal and Plant Methylomes.
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- Genome Biology & Evolution, 2017, v. 9, n. 11, p. 3189, doi. 10.1093/gbe/evx203
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- Article
What Signatures Dominantly Associate with Gene Age?
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- Genome Biology & Evolution, 2016, v. 8, n. 10, p. 3083, doi. 10.1093/gbe/evw216
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- Article
Specific Modifications of Histone Tails, but Not DNA Methylation, Mirror the Temporal Variation of Mammalian Recombination Hotspots.
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- Genome Biology & Evolution, 2014, v. 6, n. 10, p. 2918, doi. 10.1093/gbe/evu230
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- Article
Patterning and Regulatory Associations of DNA Methylation Are Mirrored by Histone Modifications in Insects.
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- Genome Biology & Evolution, 2013, v. 5, n. 3, p. 591, doi. 10.1093/gbe/evt030
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- Article
Evolution of MicroRNAs and the Diversification of Species.
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- Genome Biology & Evolution, 2011, v. 3, p. 55, doi. 10.1093/gbe/evq085
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- Article
Bis-class: a new classification tool of methylation status using bayes classifier and local methylation information
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- BMC Genomics, 2014, v. 15, n. 1, p. 608, doi. 10.1186/1471-2164-15-608
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- Article
Dnmt1a is essential for gene body methylation and the regulation of the zygotic genome in a wasp.
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- PLoS Genetics, 2022, v. 18, n. 5, p. 1, doi. 10.1371/journal.pgen.1010181
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- Article
Path lengths in protein-protein interaction networks and biological complexity.
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- Proteomics, 2011, v. 11, n. 10, p. 1857, doi. 10.1002/pmic.201000684
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- Article
Evaluation of Possible Proximate Mechanisms Underlying the Kinship Theory of Intragenomic Conflict in Social Insects.
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- Integrative & Comparative Biology, 2016, v. 56, n. 6, p. 1206, doi. 10.1093/icb/icw111
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- Article
Epigenetics and Evolution.
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- Integrative & Comparative Biology, 2014, v. 54, n. 1, p. 31, doi. 10.1093/icb/icu040
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- Article
The Function of Intragenic DNA Methylation: Insights from Insect Epigenomes.
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- Integrative & Comparative Biology, 2013, v. 53, n. 2, p. 319, doi. 10.1093/icb/ict003
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- Article
Impacts of Chromatin States and Long-Range Genomic Segments on Aging and DNA Methylation.
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- PLoS ONE, 2015, v. 10, n. 6, p. 1, doi. 10.1371/journal.pone.0128517
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- Article
Mutations of Different Molecular Origins Exhibit Contrasting Patterns of Regional Substitution Rate Variation.
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- PLoS Computational Biology, 2008, v. 4, n. 2, p. 1, doi. 10.1371/journal.pcbi.1000015
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- Article
Detecting differential DNA methylation from sequencing of bisulfite converted DNA of diverse species.
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- Briefings in Bioinformatics, 2019, v. 20, n. 1, p. 33, doi. 10.1093/bib/bbx077
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- Article
Primate phylogenomics: developing numerous nuclear non-coding, non-repetitive markers for ecological and phylogenetic applications and analysis of evolutionary rate variation.
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- BMC Genomics, 2009, v. 10, p. 1, doi. 10.1186/1471-2164-10-247
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- Article
Comparative genomics of the miniature wasp and pest control agent <italic>Trichogramma pretiosum</italic>.
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- BMC Biology, 2018, v. 16, n. 1, p. 1, doi. 10.1186/s12915-018-0520-9
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- Article
Heterogeneous Genomic Molecular Clocks in Primates.
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- PLoS Genetics, 2006, v. 3, n. 4, p. 1527, doi. 10.1371/journal.pgen.0020163
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- Article
Asymmetrical Evolution of Promoter Methylation of Mammalian Genes after Duplication.
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- Molecular Biology & Evolution, 2024, v. 41, n. 12, p. 1, doi. 10.1093/molbev/msae259
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- Article
Epigenetics Research in Evolutionary Biology: Perspectives on Timescales and Mechanisms.
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- Molecular Biology & Evolution, 2024, v. 41, n. 9, p. 1, doi. 10.1093/molbev/msae170
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- Article
Functional Relevance of CpG Island Length for Regulation of Gene Expression.
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- Genetics, 2011, v. 187, n. 4, p. 1077, doi. 10.1534/genetics.110.126094
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- Article
LINEAGE-SPECIFIC VARIATION IN SLOW- AND FAST-X EVOLUTION IN PRIMATES.
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- Evolution, 2012, v. 66, n. 6, p. 1751, doi. 10.1111/j.1558-5646.2011.01556.x
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- Article
Inactivation of mismatch repair increases the diversity of Vibrio parahaemolyticus.
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- Environmental Microbiology, 2009, v. 11, n. 5, p. 1254, doi. 10.1111/j.1462-2920.2008.01853.x
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- Article
Distinct epigenomic and transcriptomic modifications associated with Wolbachia-mediated asexuality.
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- PLoS Pathogens, 2020, v. 16, n. 3, p. 1, doi. 10.1371/journal.ppat.1008397
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- Article
Selection on the regulation of sympathetic nervous activity in humans and chimpanzees.
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- PLoS Genetics, 2018, v. 14, n. 3, p. 1, doi. 10.1371/journal.pgen.1007311
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- Article
Development and annotation of shotgun sequence libraries from New World monkeys.
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- Molecular Ecology Resources, 2012, v. 12, n. 5, p. 950, doi. 10.1111/j.1755-0998.2012.03162.x
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- Article
Whole-genome DNA methylomes of tree shrew brains reveal conserved and divergent roles of DNA methylation on sex chromosome regulation.
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- BMC Biology, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12915-024-02071-0
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- Article
Enhancer Pleiotropy, Gene Expression, and the Architecture of Human Enhancer–Gene Interactions.
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- Molecular Biology & Evolution, 2021, v. 38, n. 9, p. 3898, doi. 10.1093/molbev/msab085
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- Article
Myxosporea (Myxozoa, Cnidaria) Lack DNA Cytosine Methylation.
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- Molecular Biology & Evolution, 2021, v. 38, n. 2, p. 393, doi. 10.1093/molbev/msaa214
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- Article
Comparative Methylome Analyses Identify Epigenetic Regulatory Loci of Human Brain Evolution.
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- Molecular Biology & Evolution, 2016, v. 33, n. 11, p. 2947, doi. 10.1093/molbev/msw176
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- Article
Evolutionary Transition of Promoter and Gene Body DNA Methylation across Invertebrate-Vertebrate Boundary.
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- Molecular Biology & Evolution, 2016, v. 33, n. 4, p. 1019, doi. 10.1093/molbev/msv345
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- Article
The Evolution of Invertebrate Gene Body Methylation.
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- Molecular Biology & Evolution, 2012, v. 29, n. 8, p. 1907, doi. 10.1093/molbev/mss062
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- Article
Comparative Analyses of DNA Methylation and Sequence Evolution Using Nasonia Genomes.
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- Molecular Biology & Evolution, 2011, v. 28, n. 12, p. 3345, doi. 10.1093/molbev/msr168
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- Article
Sociality Is Linked to Rates of Protein Evolution in a Highly Social Insect.
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- Molecular Biology & Evolution, 2010, v. 27, n. 3, p. 497, doi. 10.1093/molbev/msp225
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- Article
DNA Methylation and Structural and Functional Bimodality of Vertebrate Promoters.
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- Molecular Biology & Evolution, 2008, v. 25, n. 8, p. 1602, doi. 10.1093/molbev/msn110
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- Article
Mammalian Nonsynonymous Sites Are Not Overdispersed: Comparative Genomic Analysis of Index of Dispersion of Mammalian Proteins.
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- Molecular Biology & Evolution, 2008, v. 25, n. 4, p. 634, doi. 10.1093/molbev/msm281
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- Article
Whole-genome bisulfite sequencing maps from multiple human tissues reveal novel CpG islands associated with tissue-specific regulation.
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- Human Molecular Genetics, 2016, v. 25, n. 1, p. 69, doi. 10.1093/hmg/ddv449
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- Article
Non-adaptive evolution of genome complexity.
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- BioEssays, 2006, v. 28, n. 10, p. 979, doi. 10.1002/bies.20478
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- Article
The draft genome of a socially polymorphic halictid bee, Lasioglossum albipes.
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- Genome Biology, 2013, v. 14, n. 12, p. 265, doi. 10.1186/gb-2013-14-12-r142
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- Article
Fundamental diversity of human CpG islands at multiple biological levels.
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- Epigenetics, 2014, v. 9, n. 4, p. 483, doi. 10.4161/epi.27654
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- Article
Body-hypomethylated human genes harbor extensive intragenic transcriptional activity and are prone to cancer-associated dysregulation.
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- Nucleic Acids Research, 2017, v. 45, n. 8, p. 4390, doi. 10.1093/nar/gkx020
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- Article
Development of novel EST-SSR markers for ploidy identification based on de novo transcriptome assembly for Misgurnus anguillicaudatus.
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- PLoS ONE, 2018, v. 13, n. 4, p. 1, doi. 10.1371/journal.pone.0195829
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- Article