Works matching AU Yanni Sun

Results: 132

Comparison of characteristics and mortality in multidrug resistant (MDR) and non-MDR tuberculosis patients in China.

Published in:

2015

By:

Yanni Sun;
Harley, David;
Vally, Hassan;
Sleigh, Adrian;
Sun, Yanni

Publication type:

journal article

Circ_0000105 promotes liver cancer by regulating miR‐498/PIK3R1.

Published in:

Journal of Gene Medicine, 2020, v. 22, n. 11, p. 1, doi. 10.1002/jgm.3256

By:

Sun, Yanni;
Sun, Xiuxiang;
Huang, Qingxian

Publication type:

Article

Assemble CRISPRs from metagenomic sequencing data.

Published in:

Bioinformatics, 2016, v. 32, n. 17, p. i520, doi. 10.1093/bioinformatics/btw456

By:

Jikai Lei;
Yanni Sun

Publication type:

Article

Improve homology search sensitivity of PacBio data by correcting frameshifts.

Published in:

Bioinformatics, 2016, v. 32, n. 17, p. i529, doi. 10.1093/bioinformatics/btw458

By:

Nan Du;
Yanni Sun

Publication type:

Article

LncRNA-ID: Long non-coding RNA IDentification using balanced random forests.

Published in:

Bioinformatics, 2015, v. 31, n. 24, p. 3897, doi. 10.1093/bioinformatics/btv480

By:

Achawanantakun, Rujira;
Jiao Chen;
Yanni Sun;
Yuan Zhang

Publication type:

Article

Reconstructing 16S rRNA genes in metagenomic data.

Published in:

Bioinformatics, 2015, v. 31, n. 12, p. i35, doi. 10.1093/bioinformatics/btv231

By:

Cheng Yuan;
Jikai Lei;
Cole, James;
Yanni Sun

Publication type:

Article

miR-PREFeR: an accurate, fast and easy-to-use plant miRNA prediction tool using small RNA-Seq data.

Published in:

Bioinformatics, 2014, v. 30, n. 19, p. 2837, doi. 10.1093/bioinformatics/btu380

By:

Lei, Jikai;
Sun, Yanni

Publication type:

Article

A Sensitive and Accurate protein domain cLassification Tool (SALT) for short reads.

Published in:

Bioinformatics, 2013, v. 29, n. 17, p. 2103, doi. 10.1093/bioinformatics/btt357

By:

Zhang, Yuan;
Sun, Yanni;
Cole, James R.

Publication type:

Article

Designing patterns for profile HMM search.

Published in:

Bioinformatics, 2007, v. 23, n. 2, p. e36, doi. 10.1093/bioinformatics/btl323

By:

Yanni Sun

Publication type:

Article

A Purely Biomanufactured System for Delivering Nanoparticles and STING Agonists.

Published in:

Advanced Science, 2025, v. 12, n. 3, p. 1, doi. 10.1002/advs.202408539

By:

Li, Yu‐an;
Feng, Yi;
Li, Wenjing;
Zhang, Yuqin;
Sun, Yanni;
Wang, Shifeng;
Curtiss, Roy;
Shi, Huoying

Publication type:

Article

A Bacterial mRNA‐Lysis‐Mediated Cargo Release Vaccine System for Regulated Cytosolic Surveillance and Optimized Antigen Delivery.

Published in:

Advanced Science, 2023, v. 10, n. 33, p. 1, doi. 10.1002/advs.202303568

By:

Li, Yu‐an;
Sun, Yanni;
Zhang, Yuqin;
Li, Quan;
Wang, Shifeng;
Curtiss, Roy;
Shi, Huoying

Publication type:

Article

Cap-seq reveals complicated miRNA transcriptional mechanisms in C. elegans and mouse.

Published in:

Quantitative Biology, 2017, v. 5, n. 4, p. 352, doi. 10.1007/s40484-017-0123-4

By:

Chen, Jiao;
Zhu, Dongxiao;
Sun, Yanni

Publication type:

Article

Phage family classification under Caudoviricetes: A review of current tools using the latest ICTV classification framework.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.1032186

By:

Yilin Zhu;
Jiayu Shang;
Cheng Peng;
Yanni Sun

Publication type:

Article

Distinct composition and amplification dynamics of transposable elements in sacred lotus (Nelumbo nucifera Gaertn.).

Published in:

Plant Journal, 2022, v. 112, n. 1, p. 172, doi. 10.1111/tpj.15938

By:

Cerbin, Stefan;
Ou, Shujun;
Li, Yang;
Sun, Yanni;
Jiang, Ning

Publication type:

Article

Rooted tRNAomes and evolution of the genetic code.

Published in:

Transcription (2154-1264), 2018, v. 9, n. 3, p. 137, doi. 10.1080/21541264.2018.1429837

By:

Pak, Daewoo;
Du, Nan;
Kim, Yunsoo;
Sun, Yanni;
Burton, Zachary F.

Publication type:

Article

Improving the impact of non-pharmaceutical interventions during COVID-19: examining the factors that influence engagement and the impact on individuals.

Published in:

2020

By:

Seale, Holly;
Dyer, Clare E. F.;
Abdi, Ikram;
Rahman, Kazi M.;
Sun, Yanni;
Qureshi, Mohammed O.;
Dowell-Day, Alexander;
Sward, Jonathon;
Islam, M. Saiful

Publication type:

journal article

Development and Application of Well-Test Model after Injection Biological Nanomaterials.

Published in:

Geofluids, 2022, p. 1, doi. 10.1155/2022/9717061

By:

Feng, Qing;
Gao, Ping;
Chen, Xianchao;
Li, Jiang;
Zhou, Jingchao;
Qian, Feng;
Li, Shengsheng;
Sun, Yanni;
Wang, Yingying

Publication type:

Article

Numerical simulation and field application of biological nano-technology in the low- and medium-permeability reservoirs of an offshore oilfield.

Published in:

Journal of Petroleum Exploration & Production Technology, 2022, v. 12, n. 12, p. 3275, doi. 10.1007/s13202-022-01522-0

By:

Gao, Ping;
Feng, Qing;
Chen, Xianchao;
Li, Shengsheng;
Sun, Yanni;
Li, Jiang;
Zhou, Jingchao;
Qian, Feng

Publication type:

Article

A novel LGALS1-depended and immune-associated fatty acid metabolism risk model in acute myeloid leukemia stem cells.

Published in:

Cell Death & Disease, 2024, v. 15, n. 7, p. 1, doi. 10.1038/s41419-024-06865-6

By:

Qin, Huanhuan;
Peng, Meixi;
Cheng, Jingsong;
Wang, Zhenyu;
Cui, Yinghui;
Huang, Yongxiu;
Gui, Yaoqi;
Sun, Yanni;
Xiang, Wenqiong;
Huang, Xiaomei;
Huang, Ting;
Wang, Li;
Chen, Jieping;
Hou, Yu

Publication type:

Article

VirStrain: a strain identification tool for RNA viruses.

Published in:

Genome Biology, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s13059-022-02609-x

By:

Liao, Herui;
Cai, Dehan;
Sun, Yanni

Publication type:

Article

Identifying TF-MiRNA Regulatory Relationships Using Multiple Features.

Published in:

PLoS ONE, 2015, v. 10, n. 4, p. 1, doi. 10.1371/journal.pone.0125156

By:

Shao, Mingyu;
Sun, Yanni;
Zhou, Shuigeng

Publication type:

Article

RNA-CODE: A Noncoding RNA Classification Tool for Short Reads in NGS Data Lacking Reference Genomes.

Published in:

PLoS ONE, 2013, v. 8, n. 10, p. 1, doi. 10.1371/journal.pone.0077596

By:

Yuan, Cheng;
Sun, Yanni

Publication type:

Article

Prognostic Role of Serum Albumin Level in Patients with Lymphoma Undergoing Autologous Stem Cell Transplantation.

Published in:

Annals of Transplantation, 2021, v. 26, p. 1, doi. 10.12659/AOT.933365

By:

Chengxin Luo;
Qingrong Li;
Xi Li;
Guixian Wu;
Xiangtao Huang;
Yali Zhang;
Yanni Ma;
Mingling Xie;
Yanni Sun;
Yarui Huang;
Zhen Huang;
Shuangnian Xu;
Jieping Chen

Publication type:

Article

Albumin-to-fibrinogen ratio is an independent prognostic parameter in de novo non-M3 acute myeloid leukemia.

Published in:

Clinical & Experimental Medicine, 2023, v. 23, n. 8, p. 4597, doi. 10.1007/s10238-023-01241-8

By:

Ding, Yaqun;
Qi, Xiangyu;
Li, Yang;
Sun, Yanni;
Wan, Jia;
Luo, Chengxin;
Huang, Yarui;
Li, Qingrong;
Wu, Guixian;
Zhu, Xiaoqing;
Xu, Shuangnian

Publication type:

Article

Efficient modulation of photosynthetic apparatus confers desiccation tolerance in the resurrection plant Boea hygrometrica.

Published in:

Plant & Cell Physiology, 2017, v. 58, n. 11, p. 1976, doi. 10.1093/pcp/pcx140

By:

Tinghong Tan;
Yanni Sun;
Shishuai Luo;
Chao Zhang;
Huapeng Zhou;
Honghui Lin

Publication type:

Article

Hybrid rice produces a higher yield and emits less methane.

Published in:

Plant, Soil & Environment, 2019, v. 65, n. 11, p. 549, doi. 10.17221/330/2019-PSE

By:

PING LIAO;
YANNI SUN;
YU JIANG;
YONGJUN ZENG;
ZIMING WU;
SHAN HUANG

Publication type:

Article

Experimental warming reduces fertilizer nitrogen use efficiency in a double rice cropping system.

Published in:

Plant, Soil & Environment, 2019, v. 65, n. 10, p. 483, doi. 10.17221/315/2019-PSE

By:

TAOTAO YANG;
YANHUA ZENG;
YANNI SUN;
JUN ZHANG;
XUEMING TAN;
YONGJUN ZENG;
SHAN HUANG;
XIAOHUA PAN

Publication type:

Article

Effects of long-term fertilization on the weed growth and community composition in a double-rice ecosystem during the fallow period.

Published in:

Weed Biology & Management, 2013, v. 13, n. 1, p. 10, doi. 10.1111/wbm.12004

By:

Huang, Shan;
Pan, Xiaohua;
Sun, Yanni;
Zhang, Yi;
Hang, Xiaoning;
Yu, Xichu;
Zhang, Weijian

Publication type:

Article

Characterization of Biogenic Amines in Seven Kinds of Traditional Chinese Animal Medicines by High Performance Liquid Chromatography with Precolumn Derivatization.

Published in:

Journal of Analytical Chemistry, 2022, v. 77, n. 1, p. 81, doi. 10.1134/S1061934822010166

By:

Sun, Yanni;
Ai, Yun;
Yao, Fangyuan;
Mao, Fei;
Wang, Xinna;
Zhang, Yan;
Guo, Fengyi;
He, Ying;
Liu, Jianli;
Zhang, Ning

Publication type:

Article

Protective effect of emodin on intestinal epithelial tight junction barrier integrity in rats with sepsis induced by cecal ligation and puncture.

Published in:

Experimental & Therapeutic Medicine, 2020, v. 19, n. 6, p. 3521, doi. 10.3892/etm.2020.8625

By:

Li, Yanjun;
Guo, Ruimin;
Zhang, Mengying;
Chen, Peng;
Li, Jingxin;
Sun, Yanni

Publication type:

Article

Association of blood glucose and lipid levels with complete blood count indices to establish a regression model.

Published in:

Biomedical Reports, 2017, v. 6, n. 3, p. 339, doi. 10.3892/br.2017.852

By:

GUANGSHU HAO;
DAN WANG;
YANNI SUN;
JIONG YU;
FEIYAN LIN;
HONGCUI CAO

Publication type:

Article

Comparison of the efficacy of hematopoietic stem cell mobilization regimens: a systematic review and network meta-analysis of preclinical studies.

Published in:

Stem Cell Research & Therapy, 2021, v. 12, n. 1, p. 1, doi. 10.1186/s13287-021-02379-6

By:

Luo, Chengxin;
Wang, Li;
Wu, Guixian;
Huang, Xiangtao;
Zhang, Yali;
Ma, Yanni;
Xie, Mingling;
Sun, Yanni;
Huang, Yarui;
Huang, Zhen;
Song, Qiuyue;
Li, Hui;
Hou, Yu;
Li, Xi;
Xu, Shuangnian;
Chen, Jieping

Publication type:

Article

Methyl Jasmonate Triggers Cadmium Detoxification in Tomato Plants via Depressing Cd<sup>2+</sup> Influx, Altering the Subcellular Distribution, and Chemical Forms of Cadmium.

Published in:

Water, Air & Soil Pollution, 2022, v. 233, n. 11, p. 1, doi. 10.1007/s11270-022-05934-w

By:

Wei, Ting;
Sun, Yanni;
Li, Hong;
Hua, Li;
Ren, Xinhao;
Jia, Honglei;
Guo, Junkang

Publication type:

Article

Improving protein domain classification for third-generation sequencing reads using deep learning.

Published in:

BMC Genomics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12864-021-07468-7

By:

Du, Nan;
Shang, Jiayu;
Sun, Yanni

Publication type:

Article

Interactive effects of water management and liming on CH<sub>4</sub> emissions and rice cadmium uptake in an acid paddy soil.

Published in:

Environmental Science & Pollution Research, 2023, v. 30, n. 5, p. 13551, doi. 10.1007/s11356-022-23162-x

By:

Wang, Yong;
Sun, Yanni;
Chen, Le;
Shao, Hua;
Zeng, Yanhua;
Zeng, Yongjun;
Tang, Feiyu;
Cai, Junhuo;
Huang, Shan

Publication type:

Article

Effect of exogenous silicon and methyl jasmonate on the alleviation of cadmium-induced phytotoxicity in tomato plants.

Published in:

Environmental Science & Pollution Research, 2021, v. 28, n. 37, p. 51854, doi. 10.1007/s11356-021-14252-3

By:

Wei, Ting;
Li, Xian;
Yashir, Noman;
Li, Hong;
Sun, Yanni;
Hua, Li;
Ren, Xinhao;
Guo, Junkang

Publication type:

Article

Zfp521 SUMOylation facilities erythroid hematopoietic reconstitution under stress.

Published in:

Bioscience, Biotechnology & Biochemistry, 2020, v. 84, n. 5, p. 943, doi. 10.1080/09168451.2019.1703639

By:

Zhang, Yali;
Xu, Shuangnian;
Chen, Zhe;
Xie, Mingling;
Ma, Yanni;
Wu, Guixian;
Huang, Xiangtao;
Luo, Chengxin;
Huang, Zhen;
Sun, Yanni;
Huang, Yongxiu;
Li, Xi;
Hou, Yu;
Chen, Jieping

Publication type:

Article

Interactive effects of temperature and moisture on CO and CH production in a paddy soil under long-term different fertilization regimes.

Published in:

Biology & Fertility of Soils, 2016, v. 52, n. 3, p. 285, doi. 10.1007/s00374-015-1075-3

By:

Huang, Shan;
Sun, Yanni;
Yu, Xichu;
Zhang, Weijian

Publication type:

Article

Effect of rice panicle size on paddy field CH emissions.

Published in:

Biology & Fertility of Soils, 2016, v. 52, n. 3, p. 389, doi. 10.1007/s00374-015-1084-2

By:

Jiang, Yu;
Tian, Yunlu;
Sun, Yanni;
Zhang, Yi;
Hang, Xiaoning;
Deng, Aixi;
Zhang, Jun;
Zhang, Weijian

Publication type:

Article

ABSCISIC ACID INSENSITIVE3 Is Involved in Cold Response and Freezing Tolerance Regulation in Physcomitrella patens.

Published in:

Frontiers in Plant Science, 2017, p. 1, doi. 10.3389/fpls.2017.01599

By:

Tinghong Tan;
Yanni Sun;
Xingji Peng;
Guochun Wu;
Fang Bao;
Yikun He;
Huapeng Zhou;
Honghui Lin

Publication type:

Article

Salmonella enterica serovar Choleraesuis vector delivering a dual-antigen expression cassette provides mouse cross-protection against Streptococcus suis serotypes 2, 7, 9, and 1/2.

Published in:

Veterinary Research, 2022, v. 53, n. 1, p. 1, doi. 10.1186/s13567-022-01062-9

By:

Li, Yu-an;
Sun, Yanni;
Fu, Yang;
Zhang, Yuqin;
Li, Quan;
Wang, Shifeng;
Shi, Huoying

Publication type:

Article

Effect of maternal body mass index on the steroid profile in women with gestational diabetes mellitus.

Published in:

Frontiers in Endocrinology, 2022, v. 13, p. 1, doi. 10.3389/fendo.2022.999154

By:

Yanni Sun;
Bo Zhu;
Xingjun Meng;
Binbin Yin;
Kaiqi Wu;
Yifeng Liu;
Dandan Zou;
Jianyou Xue;
Xiao Sun;
Dan Zhang;
Zhixin Ma

Publication type:

Article

The Global Fund in China: Multidrug-resistant tuberculosis nationwide programmatic scale-up and challenges to transition to full country ownership.

Published in:

PLoS ONE, 2017, v. 12, n. 6, p. 1, doi. 10.1371/journal.pone.0177536

By:

Wang, Lixia;
Li, Renzhong;
Xu, Caihong;
Zhang, Hui;
Ruan, Yunzhou;
Chen, Mingting;
Wang, Dongmei;
Dirlikov, Emilio;
Du, Xin;
Zhao, Jin;
Zhao, Yanlin;
Wang, Shengfen;
Liu, Yuhong;
Li, Liang;
Falzon, Dennis;
Sun, Yanni;
Wang, Yu;
Schwartländer, Bernhard;
Scano, Fabio

Publication type:

Article

Impact of Multidrug Resistance on Tuberculosis Recurrence and Long-Term Outcome in China.

Published in:

PLoS ONE, 2017, v. 12, n. 1, p. 1, doi. 10.1371/journal.pone.0168865

By:

Sun, Yanni;
Harley, David;
Vally, Hassan;
Sleigh, Adrian

Publication type:

Article

Changes in soil organic carbon stocks as affected by cropping systems and cropping duration in China's paddy fields: a meta-analysis.

Published in:

Climatic Change, 2012, v. 112, n. 3/4, p. 847, doi. 10.1007/s10584-011-0255-x

By:

Huang, Shan;
Sun, Yanni;
Zhang, Weijian

Publication type:

Article

PhaBOX: a web server for identifying and characterizing phage contigs in metagenomic data.

Published in:

Bioinformatics Advances, 2023, v. 3, n. 1, p. 1, doi. 10.1093/bioadv/vbad101

By:

Shang, Jiayu;
Peng, Cheng;
Liao, Herui;
Tang, Xubo;
Sun, Yanni

Publication type:

Article

An efficient propagation system through stem cuttings of a multipurpose plant—Ficus tikoua Bur.

Published in:

PeerJ, 2024, p. 1, doi. 10.7717/peerj.18768

By:

Tan, Tinghong;
Peng, Yu;
An, Biling;
Gao, Fan;
Sun, Yanni;
Yang, Chuandong;
Yang, Hong;
Lu, Zhihong

Publication type:

Article

GOPhage: protein function annotation for bacteriophages by integrating the genomic context.

Published in:

Briefings in Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1093/bib/bbaf014

By:

Guan, Jiaojiao;
Ji, Yongxin;
Peng, Cheng;
Zou, Wei;
Tang, Xubo;
Shang, Jiayu;
Sun, Yanni

Publication type:

Article

Utilizing profile hidden Markov model databases for discovering viruses from metagenomic data: a comprehensive review.

Published in:

Briefings in Bioinformatics, 2024, v. 25, n. 4, p. 1, doi. 10.1093/bib/bbae292

By:

Yu, Runzhou;
Huang, Ziyi;
Lam, Theo Y C;
Sun, Yanni

Publication type:

Article

PhaGenus: genus-level classification of bacteriophages using a Transformer model.

Published in:

Briefings in Bioinformatics, 2023, v. 24, n. 6, p. 1, doi. 10.1093/bib/bbad408

By:

Guan, Jiaojiao;
Peng, Cheng;
Shang, Jiayu;
Tang, Xubo;
Sun, Yanni

Publication type:

Article