Works by Yang, Li-Quan

Results: 14

Conformational Remodeling and Allosteric Regulation Underlying EGFR Mutant-Induced Activation: A Multi-Scale Analysis Using MD, MSMs, and NRI.

Published in:

International Journal of Molecular Sciences, 2025, v. 26, n. 13, p. 6226, doi. 10.3390/ijms26136226

By:

Duan, Hui;
Zhao, De-Rui;
Liu, Meng-Ting;
Yang, Li-Quan;
Sang, Peng

Publication type:

Article

Characterization of a thermostable uricase derived from Thermoactinospora rubra YIM 77501<sup>T</sup> and its heat-resistant mechanism.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1615845

By:

Yan, Xin;
Tang, Lan-Xin;
Ortúzar, Maite;
Yang, Li-Quan;
Sang, Peng;
Jin, Na-Ying;
Li, Lin-Hua;
Yang, Zheng-Feng;
Wang, Yan-Wen;
Li, Wen-Jun;
Hu, Wei;
Yin, Yi-Rui

Publication type:

Article

Characterization of a Cu2+, SDS, alcohol and glucose tolerant GH1 β-glucosidase from Bacillus sp. CGMCC 1.16541.

Published in:

Antonie van Leeuwenhoek, 2020, v. 113, n. 10, p. 1467, doi. 10.1007/s10482-020-01455-w

By:

Yin, Yi-Rui;
Sang, Peng;
Yang, Feng-Li;
Li, Tao;
Yang, Run-Feng;
Liu, Hong-Yan;
Luo, Zong-Long;
Li, Wen-Jun;
Yang, Li-Quan

Publication type:

Article

Electrostatic Interactions Are the Primary Determinant of the Binding Affinity of SARS-CoV-2 Spike RBD to ACE2: A Computational Case Study of Omicron Variants.

Published in:

International Journal of Molecular Sciences, 2022, v. 23, n. 23, p. 14796, doi. 10.3390/ijms232314796

By:

Sang, Peng;
Chen, Yong-Qin;
Liu, Meng-Ting;
Wang, Yu-Ting;
Yue, Ting;
Li, Yi;
Yin, Yi-Rui;
Yang, Li-Quan

Publication type:

Article

New Insight into Mechanisms of Protein Adaptation to High Temperatures: A Comparative Molecular Dynamics Simulation Study of Thermophilic and Mesophilic Subtilisin-Like Serine Proteases.

Published in:

International Journal of Molecular Sciences, 2020, v. 21, n. 9, p. 3128, doi. 10.3390/ijms21093128

By:

Sang, Peng;
Liu, Shu-Qun;
Yang, Li-Quan

Publication type:

Article

Effects of CD4 Binding on Conformational Dynamics, Molecular Motions, and Thermodynamics of HIV-1 gp120.

Published in:

International Journal of Molecular Sciences, 2019, v. 20, n. 2, p. 260, doi. 10.3390/ijms20020260

By:

Li, Yi;
Deng, Lei;
Yang, Li-Quan;
Sang, Peng;
Liu, Shu-Qun

Publication type:

Article

Deciphering gp120 sequence variation and structural dynamics in HIV neutralization phenotype by molecular dynamics simulations and graph machine learning.

Published in:

Proteins, 2022, v. 90, n. 7, p. 1413, doi. 10.1002/prot.26322

By:

Li, Yi;
Guo, Yu‐Chen;
Cheng, Hong‐Han;
Zeng, Xin;
Zhang, Xiao‐Ling;
Sang, Peng;
Chen, Ben‐Hui;
Yang, Li‐Quan

Publication type:

Article

Characterization of a GH10 extremely thermophilic xylanase from the metagenome of hot spring for prebiotic production.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-42920-6

By:

Yin, Yi-Rui;
Li, Xin-Wei;
Long, Chao-Hua;
Li, Lei;
Hang, Yu-Ying;
Rao, Meng-Di;
Yan, Xin;
Liu, Quan-Lin;
Sang, Peng;
Li, Wen-Jun;
Yang, Li-Quan

Publication type:

Article

Characterization of a GH10 extremely thermophilic xylanase from the metagenome of hot spring for prebiotic production.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-42920-6

By:

Yin, Yi-Rui;
Li, Xin-Wei;
Long, Chao-Hua;
Li, Lei;
Hang, Yu-Ying;
Rao, Meng-Di;
Yan, Xin;
Liu, Quan-Lin;
Sang, Peng;
Li, Wen-Jun;
Yang, Li-Quan

Publication type:

Article

Characterization, thermostable mechanism, and molecular docking of a novel glucose-tolerant β -glucosidase/ β -galactosidase from the GH1 family isolated from Rehai hot spring.

Published in:

Frontiers in Microbiology, 2025, p. 1, doi. 10.3389/fmicb.2025.1559242

By:

Huang, Yu-Ying;
Zhu, Dan;
Yang, Li-Quan;
Ortúzar, Maite;
Yang, Zheng-Feng;
Lv, Zhi-Hua;
Xie, Kai-Qing;
Jiang, Hong-Chen;
Li, Wen-Jun;
Yin, Yi-Rui

Publication type:

Article

Insight Derived from Molecular Dynamics Simulations into Molecular Motions, Thermodynamics and Kinetics of HIV-1 gp120.

Published in:

PLoS ONE, 2014, v. 9, n. 8, p. 1, doi. 10.1371/journal.pone.0104714

By:

Sang, Peng;
Yang, Li-Quan;
Ji, Xing-Lai;
Fu, Yun-Xin;
Liu, Shu-Qun

Publication type:

Article

Insight derived from molecular dynamics simulation into cold-adaptation mechanism of trypsins.

Published in:

2020

By:

Yang, Li-Quan;
Yin, Yi-Rui;
Shen, Jian-Xin;
Li, Yi;
Liu, Shu-Qun;
Sang, Peng

Publication type:

Letter

Insight derived from molecular dynamics simulation into dynamics and molecular motions of cuticle-degrading serine protease Ver112.

Published in:

Journal of Biomolecular Structure & Dynamics, 2019, v. 37, n. 8, p. 2004, doi. 10.1080/07391102.2018.1471418

By:

Yang, Li-Quan;
Chen, Gui-Yuan;
Li, Yi;
Zhang, Ruo-Peng;
Liu, Shu-Qun;
Sang, Peng

Publication type:

Article

Identify Regioselective Residues of Ginsenoside Hydrolases by Graph-Based Active Learning from Molecular Dynamics.

Published in:

Molecules, 2024, v. 29, n. 15, p. 3614, doi. 10.3390/molecules29153614

By:

Li, Yi;
Peng, Hong-Qian;
Wen, Meng-Liang;
Yang, Li-Quan

Publication type:

Article