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Nanoparticles advanced from preclinical studies to clinical trials for lung cancer therapy.
Published in:
Cancer Nanotechnology (1868-6958), 2023, v. 14, n. 1, p. 1, doi. 10.1186/s12645-023-00174-x
By:
- Liu, Yifan;
- Cheng, Wenxu;
- Xin, HongYi;
- Liu, Ran;
- Wang, Qinqi;
- Cai, Wenqi;
- Peng, Xiaochun;
- Yang, Fuyuan;
- Xin, HongWu
Publication type:
Article
Analysis of synonymous codon usage in the UL24 gene of duck enteritis virus.
Published in:
Virus Genes, 2009, v. 38, n. 1, p. 96, doi. 10.1007/s11262-008-0295-0
By:
- Renyong Jia;
- Anchun Cheng;
- Mingshu Wang;
- Hongyi Xin;
- Yufei Guo;
- Dekang Zhu;
- Xuefeng Qi;
- Lichan Zhao;
- Han Ge;
- Xiaoyue Chen
Publication type:
Article
A Bayesian mixture model for clustering droplet-based single-cell transcriptomic data from population studies.
Published in:
Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-09639-3
By:
- Sun, Zhe;
- Chen, Li;
- Xin, Hongyi;
- Jiang, Yale;
- Huang, Qianhui;
- Cillo, Anthony R.;
- Tabib, Tracy;
- Kolls, Jay K.;
- Bruno, Tullia C.;
- Lafyatis, Robert;
- Vignali, Dario A. A.;
- Chen, Kong;
- Ding, Ying;
- Hu, Ming;
- Chen, Wei
Publication type:
Article
Spatial transcriptomics reveals heterogeneity of histological subtypes between lepidic and acinar lung adenocarcinoma.
Published in:
2024
By:
- Xie, Linshan;
- Kong, Hui;
- Yu, Jinjie;
- Sun, Mengting;
- Lu, Shaohua;
- Zhang, Yong;
- Hu, Jie;
- Du, Fang;
- Lian, Qiuyu;
- Xin, Hongyi;
- Zhou, Jian;
- Wang, Xiangdong;
- Powell, Charles A.;
- Hirsch, Fred R.;
- Bai, Chunxue;
- Song, Yuanlin;
- Yin, Jun;
- Yang, Dawei
Publication type:
Case Study
Context-aware seeds for read mapping.
Published in:
Algorithms for Molecular Biology, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s13015-020-00172-3
By:
- Xin, Hongyi;
- Shao, Mingfu;
- Kingsford, Carl
Publication type:
Article
GRIM-Filter: Fast seed location filtering in DNA read mapping using processing-in-memory technologies.
Published in:
BMC Genomics, 2018, v. 19, p. 23, doi. 10.1186/s12864-018-4460-0
By:
- Kim, Jeremie S.;
- Cali, Damla Senol;
- Hongyi Xin;
- Donghyuk Lee;
- Ghose, Saugata;
- Alser, Mohammed;
- Hassan, Hasan;
- Ergin, Oguz;
- Alkan, Can;
- Mutlu, Onur
Publication type:
Article
GAN-DIRNet: A Novel Deformable Image Registration Approach for Multimodal Histological Images.
Published in:
Computers, Materials & Continua, 2024, v. 80, n. 1, p. 487, doi. 10.32604/cmc.2024.049640
By:
- Li, Haiyue;
- Xie, Jing;
- Ke, Jing;
- Yuan, Ye;
- Pan, Xiaoyong;
- Xin, Hongyi;
- Shen, Hongbin
Publication type:
Article
Cloning, Expression, Purification and Characterization of UL24 Partial Protein of Duck Enteritis Virus.
Published in:
Intervirology, 2009, v. 52, n. 6, p. 326, doi. 10.1159/000242354
By:
- Renyong Jia;
- Anchun Cheng;
- Mingshu Wang;
- Dekang Zhu;
- Han Ge;
- Hongyi Xin;
- Fei Liu;
- Qihui Luo;
- Yufei Guo;
- Xuefeng Qi;
- Zhongqiong Yin;
- Xiaoyue Chen
Publication type:
Article
BREM-SC: a bayesian random effects mixture model for joint clustering single cell multi-omics data.
Published in:
Nucleic Acids Research, 2020, v. 48, n. 11, p. 5814, doi. 10.1093/nar/gkaa314
By:
- Wang, Xinjun;
- Sun, Zhe;
- Zhang, Yanfu;
- Xu, Zhongli;
- Xin, Hongyi;
- Huang, Heng;
- Duerr, Richard H;
- Chen, Kong;
- Ding, Ying;
- Chen, Wei
Publication type:
Article
Large language model answers medical questions about standard pathology reports.
Published in:
Frontiers in Medicine, 2024, p. 1, doi. 10.3389/fmed.2024.1402457
By:
- Anqi Wang;
- Jieli Zhou;
- Peng Zhang;
- Haotian Cao;
- Hongyi Xin;
- Xinyun Xu;
- Haiyang Zhou
Publication type:
Article
GMM-Demux: sample demultiplexing, multiplet detection, experiment planning, and novel cell-type verification in single cell sequencing.
Published in:
Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-02084-2
By:
- Xin, Hongyi;
- Lian, Qiuyu;
- Jiang, Yale;
- Luo, Jiadi;
- Wang, Xinjun;
- Erb, Carla;
- Xu, Zhongli;
- Zhang, Xiaoyi;
- Heidrich-O'Hare, Elisa;
- Yan, Qi;
- Duerr, Richard H.;
- Chen, Kong;
- Chen, Wei
Publication type:
Article
GMM-Demux: sample demultiplexing, multiplet detection, experiment planning, and novel cell-type verification in single cell sequencing.
Published in:
Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-02084-2
By:
- Xin, Hongyi;
- Lian, Qiuyu;
- Jiang, Yale;
- Luo, Jiadi;
- Wang, Xinjun;
- Erb, Carla;
- Xu, Zhongli;
- Zhang, Xiaoyi;
- Heidrich-O’Hare, Elisa;
- Yan, Qi;
- Duerr, Richard H.;
- Chen, Kong;
- Chen, Wei
Publication type:
Article
Expert consensus on the "Digital Human" of metaverse in medicine.
Published in:
Clinical eHealth, 2023, v. 6, p. 159, doi. 10.1016/j.ceh.2023.11.005
By:
- Dawei Yang;
- Mengting Sun;
- Jian Zhou;
- Yeting Lu;
- Zhenju Song;
- Zhihong Chen;
- Dong Yang;
- Xueling Wu;
- Haiyan Ge;
- Yuming Zhang;
- Chengshi Gao;
- Jianwei Xuan;
- Xiaoying Li;
- Jun Yin;
- Xiaodan Zhu;
- Jie Liu;
- Hongyi Xin;
- Weipeng Jiang;
- Ningfang Wang;
- Yuan Wang
Publication type:
Article
Emerging artificial intelligence methods for fighting lung cancer: A survey.
Published in:
Clinical eHealth, 2022, v. 5, p. 19, doi. 10.1016/j.ceh.2022.04.001
By:
- Jieli Zhou;
- Hongyi Xin
Publication type:
Article
Expert consensus on the metaverse in medicine.
Published in:
Clinical eHealth, 2022, v. 5, p. 1, doi. 10.1016/j.ceh.2022.02.001
By:
- Dawei Yang;
- Jian Zhou;
- Rongchang Chen;
- Yuanlin Song;
- Zhenju Song;
- Xiaoju Zhang;
- Qi Wang;
- Kai Wang;
- Chengzhi Zhou;
- Jiayuan Sun;
- Lichuan Zhang;
- Li Bai;
- Yuehong Wang;
- Xu Wang;
- Yeting Lu;
- Hongyi Xin;
- Powell, Charles A.;
- Thüemmler, Christoph;
- Chavannes, Niels H.;
- Wei Chen
Publication type:
Article
Artificial-cell-type aware cell-type classification in CITE-seq.
Published in:
Bioinformatics, 2020, v. 36, p. i542, doi. 10.1093/bioinformatics/btaa467
By:
- Qiuyu Lian;
- Hongyi Xin;
- Jianzhu Ma;
- Liza Konnikova;
- Wei Chen;
- Jin Gu;
- Kong Chen
Publication type:
Article
GateKeeper: a new hardware architecture for accelerating pre-alignment in DNA short read mapping.
Published in:
Bioinformatics, 2017, v. 33, n. 21, p. 3355, doi. 10.1093/bioinformatics/btx342
By:
- Alser, Mohammed;
- Hassan, Hasan;
- Hongyi Xin;
- Ergin, Oğuz;
- Mutlu, Onur;
- Alkan, Can
Publication type:
Article
Optimal seed solver: optimizing seed selection in read mapping.
Published in:
Bioinformatics, 2016, v. 32, n. 11, p. 1632, doi. 10.1093/bioinformatics/btv670
By:
- Hongyi Xin;
- Nahar, Sunny;
- Zhu, Richard;
- Emmons, John;
- Pekhimenko, Gennady;
- Kingsford, Carl;
- Alkan, Can;
- Mutl, Onur
Publication type:
Article
Shifted Hamming distance: a fast and accurate SIMD-friendly filter to accelerate alignment verification in read mapping.
Published in:
2015
By:
- Hongyi Xin;
- Greth, John;
- Emmons, John;
- Pekhimenko, Gennady;
- Kingsford, Carl;
- Alkan, Can;
- Mutlu, Onur
Publication type:
Product Review

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