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Genome-wide maps of UVA and UVB mutagenesis in yeast reveal distinct causative lesions and mutational strand asymmetries.
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- Genetics, 2023, v. 224, n. 3, p. 1, doi. 10.1093/genetics/iyad086
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- Article
Residues in the Nucleosome Acidic Patch Regulate Histone Occupancy and Are Important for FACT Binding in Saccharomyces cerevisiae.
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- Genetics, 2017, v. 206, n. 3, p. 1339, doi. 10.1534/genetics.117.201939
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- Article
Histone Sprocket Arginine Residues Are Important for Gene Expression, DNA Repair, and Cell Viability in Saccharomyces cerevisiae.
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- Genetics, 2015, v. 200, n. 3, p. 795, doi. 10.1534/genetics.115.175885
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- Article
High-resolution mapping demonstrates inhibition of DNA excision repair by transcription factors.
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- eLife, 2022, p. 1, doi. 10.7554/eLife.73943
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- Article
The Surprising Diversity of UV‐Induced Mutations.
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- Advanced Genetics, 2024, v. 5, n. 2, p. 1, doi. 10.1002/ggn2.202300205
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- Article
Genetic and Genomewide Analysis of Simultaneous Mutations in Acetylated and Methylated Lysine Residues in Histone H3 in Saccharomyces cerevisiae.
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- Genetics, 2009, v. 181, n. 2, p. 461, doi. 10.1534/genetics.108.098897
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- Article
Redundant Roles for Histone H3 N-Terminal Lysine Residues in Subtelomeric Gene Repression in Saccharomyces cerevisiae.
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- Genetics, 2004, v. 167, n. 3, p. 1123, doi. 10.1534/genetics.104.026674
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- Article
Analysis of cytosine deamination events in excision repair sequencing reads reveals mechanisms of incision site selection in NER.
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- Nucleic Acids Research, 2024, v. 52, n. 4, p. 1720, doi. 10.1093/nar/gkad1195
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- Article
R-loop formation by dCas9 is mutagenic in Saccharomyces cerevisiae.
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- Nucleic Acids Research, 2019, v. 47, n. 5, p. 2389, doi. 10.1093/nar/gky1278
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- Article
A basic domain in the histone H2B N-terminal tail is important for nucleosome assembly by FACT.
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- Nucleic Acids Research, 2016, v. 44, n. 19, p. 9142, doi. 10.1093/nar/gkw588
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- Article
The amino-terminal tails of histones H2A and H3 coordinate efficient base excision repair, DNA damage signaling and postreplication repair in Saccharomyces cerevisiae.
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- Nucleic Acids Research, 2015, v. 43, n. 10, p. 4990, doi. 10.1093/nar/gkv372
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- Article
High-resolution characterization of CPD hotspot formation in human fibroblasts.
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- Nucleic Acids Research, 2014, v. 42, n. 2, p. 893, doi. 10.1093/nar/gkt912
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- Article
Recurrent Noncoding Mutations in Skin Cancers: UV Damage Susceptibility or Repair Inhibition as Primary Driver?
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- BioEssays, 2019, v. 41, n. 3, p. N.PAG, doi. 10.1002/bies.201800152
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- Article
Genome‐wide impact of cytosine methylation and DNA sequence context on UV‐induced CPD formation.
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- Environmental & Molecular Mutagenesis, 2024, v. 65, p. 14, doi. 10.1002/em.22569
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- Article
RiceRBP: a resource for experimentally identified RNA binding proteins in Oryza sativa.
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- Frontiers in Plant Science, 2012, v. 3, p. 1, doi. 10.3389/fpls.2012.00090
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- Article
Damage mapping techniques and the light they have shed on canonical and atypical UV photoproducts.
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- Frontiers in Genetics, 2023, v. 13, p. 1, doi. 10.3389/fgene.2022.1102593
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- Article
RegulatorDB: a resource for the analysis of yeast transcriptional regulation.
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- Database: The Journal of Biological Databases & Curation, 2017, v. 2017, n. 1, p. 1, doi. 10.1093/database/bax058
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- Article
UV-Induced DNA Damage and Mutagenesis in Chromatin.
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- Photochemistry & Photobiology, 2017, v. 93, n. 1, p. 216, doi. 10.1111/php.12646
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- Article
Ceres: software for the integrated analysis of transcription factor binding sites and nucleosome positions in Saccharomyces cerevisiae.
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- Bioinformatics, 2010, v. 26, n. 2, p. 168, doi. 10.1093/bioinformatics/btp657
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- Article
Osiris: an integrated promoter database for Oryza sativa L.
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- Bioinformatics, 2008, v. 24, n. 24, p. 2915, doi. 10.1093/bioinformatics/btn537
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- Article
ChromatinDB: a database of genome-wide histone modification patterns for Saccharomyces cerevisiae.
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- Bioinformatics, 2007, v. 23, n. 14, p. 1828
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- Article
Athena: a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences.
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- Bioinformatics, 2005, v. 21, n. 24, p. 4411, doi. 10.1093/bioinformatics/bti714
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- Article
ETS transcription factors induce a unique UV damage signature that drives recurrent mutagenesis in melanoma.
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- Nature Communications, 2018, v. 9, p. 1, doi. 10.1038/s41467-018-05064-0
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- Article
Combinatorial negative regulation of glucose-responsive genes in yeast.
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- 1999
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- Abstract
Chromosomal landscape of nucleosome-dependent gene expression and silencing in yeast.
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- Nature, 1999, v. 402, n. 6760, p. 418, doi. 10.1038/46567
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- Article
Detecting recurrent passenger mutations in melanoma by targeted UV damage sequencing.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38265-3
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- Article
Contributions of replicative and translesion DNA polymerases to mutagenic bypass of canonical and atypical UV photoproducts.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38255-5
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- Article
A streamlined solution for processing, elucidating and quality control of cyclobutane pyrimidine dimer sequencing data.
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- Nature Protocols, 2021, v. 16, n. 4, p. 2190, doi. 10.1038/s41596-021-00496-3
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- Article
Nucleosome positions establish an extended mutation signature in melanoma.
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- PLoS Genetics, 2018, v. 14, n. 11, p. 1, doi. 10.1371/journal.pgen.1007823
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- Article
A cassette of N-terminal amino acids of histone H2B are required for efficient cell survival, DNA repair and Swi/Snf binding in UV irradiated yeast.
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- Nucleic Acids Research, 2010, v. 38, n. 5, p. 1450, doi. 10.1093/nar/gkp1074
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- Article
Histone H3 Lys79 methylation is required for efficient nucleotide excision repair in a silenced locus of Saccharomyces cerevisiae.
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- Nucleic Acids Research, 2009, v. 37, n. 5, p. 1690, doi. 10.1093/nar/gkp003
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- Article
New vectors for simple and streamlined CRISPR-Cas9 genome editing in Saccharomyces cerevisiae.
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- Yeast, 2015, v. 32, n. 12, p. 711, doi. 10.1002/yea.3098
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- Article
Characterization of the rice glup4 mutant suggests a role for the small GTPase Rab5 in the biosynthesis of carbon and nitrogen storage reserves in developing endosperm.
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- Breeding Science, 2010, v. 60, n. 5, p. 556, doi. 10.1270/jsbbs.60.556
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- Article
Set2 histone methyltransferase regulates transcription coupled-nucleotide excision repair in yeast.
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- PLoS Genetics, 2022, v. 18, n. 3, p. 1, doi. 10.1371/journal.pgen.1010085
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- Article
CTCF binding modulates UV damage formation to promote mutation hot spots in melanoma.
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- EMBO Journal, 2021, v. 40, n. 20, p. 1, doi. 10.15252/embj.2021107795
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- Article
DNA Repair in Nucleosomes: Insights from Histone Modifications and Mutants.
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- International Journal of Molecular Sciences, 2024, v. 25, n. 8, p. 4393, doi. 10.3390/ijms25084393
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- Article