Works matching AU Wong, Jason W. H.

Results: 25

Gene expression is a poor predictor of steady-state metabolite abundance in cancer cells.

Published in:

FASEB Journal, 2022, v. 36, n. 5, p. 1, doi. 10.1096/fj.202101921RR

By:

Huaping Li;
Barbour, Jayne A.;
Xiaoqiang Zhu;
Wong, Jason W. H.

Publication type:

Article

Analysis of 7,815 cancer exomes reveals associations between mutational processes and somatic driver mutations.

Published in:

PLoS Genetics, 2018, v. 14, n. 11, p. 1, doi. 10.1371/journal.pgen.1007779

By:

Poulos, Rebecca C.;
Wong, Yuen T.;
Ryan, Regina;
Pang, Herbert;
Wong, Jason W. H.

Publication type:

Article

Activity profiling of platelets by chemical proteomics.

Published in:

Proteomics, 2009, v. 9, n. 1, p. 40, doi. 10.1002/pmic.200800185

By:

Wong, Jason W. H.;
McRedmond, James P.;
Cagney, Gerard

Publication type:

Article

Developing a named entity framework for thyroid cancer staging and risk level classification using large language models.

Published in:

NPJ Digital Medicine, 2025, v. 8, n. 1, p. 1, doi. 10.1038/s41746-025-01528-y

By:

Fung, Matrix M. H.;
Tang, Eric H. M.;
Wu, Tingting;
Luk, Yan;
Au, Ivan C. H.;
Liu, Xiaodong;
Lee, Victor H. F.;
Wong, Chun Ka;
Wei, Zhili;
Cheng, Wing Yiu;
Tai, Isaac C. Y.;
Ho, Joshua W. K.;
Wong, Jason W. H.;
Lang, Brian H. H.;
Leung, Kathy S. M.;
Wong, Zoie S. Y.;
Wu, Joseph T.;
Wong, Carlos K. H.

Publication type:

Article

Scarcity of Recurrent Regulatory Driver Mutations in Colorectal Cancer Revealed by Targeted Deep Sequencing.

Published in:

JNCI Cancer Spectrum, 2019, v. 3, n. 2, p. N.PAG, doi. 10.1093/jncics/pkz012

By:

Poulos, Rebecca C;
Perera, Dilmi;
Packham, Deborah;
Shah, Anushi;
Janitz, Caroline;
Pimanda, John E;
Hawkins, Nicholas;
Ward, Robyn L;
Hesson, Luke B;
Wong, Jason W H

Publication type:

Article

A tumor microenvironment-specific gene expression signature predicts chemotherapy resistance in colorectal cancer patients.

Published in:

NPJ Precision Oncology, 2021, v. 5, n. 1, p. 1, doi. 10.1038/s41698-021-00142-x

By:

Zhu, Xiaoqiang;
Tian, Xianglong;
Ji, Linhua;
Zhang, Xinyu;
Cao, Yingying;
Shen, Chaoqin;
Hu, Ye;
Wong, Jason W. H.;
Fang, Jing-Yuan;
Hong, Jie;
Chen, Haoyan

Publication type:

Article

Computational methods for the comparative quantification of proteins in label-free LC<sup>n</sup>-MS experiments.

Published in:

Briefings in Bioinformatics, 2008, v. 9, n. 2, p. 156, doi. 10.1093/bib/bbm046

By:

Wong, Jason W. H.;
Sullivan, Matthew J.;
Cagney, Gerard

Publication type:

Article

Proteogenomic interrogation of cancer cell lines: an overview of the field.

Published in:

Expert Review of Proteomics, 2021, v. 18, n. 3, p. 221, doi. 10.1080/14789450.2021.1914594

By:

Tsang, Olson;
Wong, Jason W. H.

Publication type:

Article

Disulfide Bond Acquisition through Eukaryotic Protein Evolution.

Published in:

Molecular Biology & Evolution, 2011, v. 28, n. 1, p. 327, doi. 10.1093/molbev/msq194

By:

Wong, Jason W. H.;
Ho, Simon Y. W.;
Hogg, Philip J.

Publication type:

Article

Signal analysis for genome-wide maps of histone modifications measured by ChIP-seq.

Published in:

Bioinformatics, 2012, v. 28, n. 8, p. 1062, doi. 10.1093/bioinformatics/bts085

By:

Beck, Dominik;
Brandl, Miriam B.;
Boelen, Lies;
Unnikrishnan, Ashwin;
Pimanda, John E.;
Wong, Jason W. H.

Publication type:

Article

Arrested Hematopoiesis and Vascular Relaxation Defects in Mice with a Mutation in Dhfr.

Published in:

Molecular & Cellular Biology, 2016, v. 36, n. 8, p. 1222, doi. 10.1128/MCB.01035-15

By:

Thoms, Julie A. I.;
Knezevic, Kathy;
Jia Jenny Liu;
Glaros, Elias N.;
Thuan Thai;
Qiao Qiao;
Campbell, Heather;
Packham, Deborah;
Yizhou Huang;
Papathanasiou, Peter;
Tunningley, Robert;
Whittle, Belinda;
Yeung, Amanda W. S.;
Chandrakanthan, Vashe;
Hesson, Luke;
Vivien Chen;
Wong, Jason W. H.;
Purton, Louise E.;
Ward, Robyn L.;
Thomas, Shane R.

Publication type:

Article

Neuropathological Applications of Microscopy with Ultraviolet Surface Excitation (MUSE): A Concordance Study of Human Primary and Metastatic Brain Tumors.

Published in:

Brain Sciences (2076-3425), 2024, v. 14, n. 1, p. 108, doi. 10.3390/brainsci14010108

By:

Lechpammer, Mirna;
Todd, Austin;
Tang, Vivian;
Morningstar, Taryn;
Borowsky, Alexander;
Shahlaie, Kiarash;
Kintner, John A.;
McPherson, John D.;
Bishop, John W.;
Fereidouni, Farzad;
Harmany, Zachary T.;
Coley, Nicholas;
Zagzag, David;
Wong, Jason W. H.;
Tao, Jiang;
Hesson, Luke B.;
Burnett, Leslie;
Levenson, Richard

Publication type:

Article

Performance of the computer algorithm COMPLX for the detection of protein complexes in the mass spectra of simulated biological mixtures.

Published in:

Journal of Mass Spectrometry, 2005, v. 40, n. 9, p. 1187, doi. 10.1002/jms.894

By:

Wong, Jason W. H.;
Downard, Kevin M.

Publication type:

Article

COMPLX: a computer algorithm for the detection of protein-ligand and other macromolecular complexes in mass spectra.

Published in:

Journal of Mass Spectrometry, 2003, v. 38, n. 5, p. 573, doi. 10.1002/jms.474

By:

Wong, Jason W. H.;
Downard, Kevin M.

Publication type:

Article

FluTyper--an algorithm for automated typing andsubtyping of the influenza virus from highresolution mass spectral data.

Published in:

BMC Bioinformatics, 2010, v. 11, p. 266, doi. 10.1186/1471-2105-11-266

By:

Wong, Jason W. H.;
Schwahn, Alexander B.;
Downard, Kevin M.

Publication type:

Article

BloodChIP Xtra: an expanded database of comparative genome-wide transcription factor binding and gene-expression profiles in healthy human stem/progenitor subsets and leukemic cells.

Published in:

Nucleic Acids Research, 2024, v. 52, n. D1, p. D1131, doi. 10.1093/nar/gkad918

By:

Thoms, Julie A I;
Koch, Forrest C;
Raei, Alireza;
Subramanian, Shruthi;
Wong, Jason W H;
Vafaee, Fatemeh;
Pimanda, John E

Publication type:

Article

The interaction between cytosine methylation and processes of DNA replication and repair shape the mutational landscape of cancer genomes.

Published in:

Nucleic Acids Research, 2017, v. 45, n. 13, p. 7786, doi. 10.1093/nar/gkx463

By:

Poulos, Rebecca C.;
Olivier, Jake;
Wong, Jason W. H.

Publication type:

Article

A quantitative proteomics approach identifies ETV6 and IKZF1 as new regulators of an ERG-driven transcriptional network.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 22, p. 10644, doi. 10.1093/nar/gkw804

By:

Unnikrishnan, Ashwin;
Guan, Yi F.;
Yizhou Huang;
Beck, Dominik;
Thoms, Julie A. I.;
Peirs, Sofie;
Knezevic, Kathy;
Shiyong Ma;
de Walle, Inge V.;
de Jong, Ineke;
Ali, Zara;
Ling Zhong;
Raftery, Mark J.;
Taghon, Tom;
Larsson, Jonas;
MacKenzie, Karen L.;
Van Vlierberghe, Pieter;
Wong, Jason W. H.;
Pimanda, John E.

Publication type:

Article

BloodChIP: a database of comparative genome-wide transcription factor binding profiles in human blood cells.

Published in:

Nucleic Acids Research, 2014, v. 42, n. D1, p. D172, doi. 10.1093/nar/gkt1036

By:

Chacon, Diego;
Beck, Dominik;
Perera, Dilmi;
Wong, Jason W. H.;
Pimanda, John E.

Publication type:

Article

OncoCis: annotation of cis-regulatory mutations in cancer.

Published in:

Genome Biology, 2014, v. 15, n. 10, p. 1, doi. 10.1186/s13059-014-0485-0

By:

Perera, Dilmi;
Chacon, Diego;
Thoms, Julie A. I.;
Poulos, Rebecca C.;
Shlien, Adam;
Beck, Dominik;
Campbell, Peter J.;
Pimanda, John E.;
Wong, Jason W. H.

Publication type:

Article

Poor mobilization of autologous CD34<sup>+</sup> peripheral blood stem cells in haematology patients undergoing autologous stem cell transplantation is associated with the presence of variants in genes implicated in clonal haematopoiesis of indeterminant potential

Published in:

British Journal of Haematology, 2021, v. 193, n. 4, p. 841, doi. 10.1111/bjh.17316

By:

Gifford, Grace;
Hesson, Luke;
Wong, Jason W. H.;
Carroll, Adam;
Gabrielli, Sara;
Bai, LiJun;
Xia, Wei;
Stevenson, William;
Greenwood, Matthew

Publication type:

Article

Mutational processes of distinct POLE exonuclease domain mutants drive an enrichment of a specific TP53 mutation in colorectal cancer.

Published in:

PLoS Genetics, 2020, v. 16, n. 2, p. 1, doi. 10.1371/journal.pgen.1008572

By:

Fang, Hu;
Barbour, Jayne A.;
Poulos, Rebecca C.;
Katainen, Riku;
Aaltonen, Lauri A.;
Wong, Jason W. H.

Publication type:

Article

Single nucleotide polymorphism array profiling identifies distinct chromosomal aberration patterns across colorectal adenomas and carcinomas.

Published in:

Genes, Chromosomes & Cancer, 2015, v. 54, n. 5, p. 303, doi. 10.1002/gcc.22243

By:

Zarzour, Peter;
Boelen, Lies;
Luciani, Fabio;
Beck, Dominik;
Sakthianandeswaren, Anuratha;
Mouradov, Dmitri;
Sieber, Oliver M.;
Hawkins, Nicholas J.;
Hesson, Luke B.;
Ward, Robyn L.;
Wong, Jason W. H.

Publication type:

Article

Repurposing sodium-glucose co-transporter 2 inhibitors (SGLT2i) for cancer treatment – A Review.

Published in:

Reviews in Endocrine & Metabolic Disorders, 2021, v. 22, n. 4, p. 1121, doi. 10.1007/s11154-021-09675-9

By:

Lau, Kristy T. K.;
Ng, Lui;
Wong, Jason W. H.;
Loong, Herbert H. F.;
Chan, Wendy W. L.;
Lee, Chi Ho;
Wong, Carlos K. H.

Publication type:

Article

Epigenetic inactivation of the candidate tumor suppressor USP44 is a frequent and early event in colorectal neoplasia.

Published in:

Epigenetics, 2014, v. 9, n. 8, p. 1092, doi. 10.4161/epi.29222

By:

Sloane, Mathew A.;
Wong, Jason W. H.;
Perera, Dilmi;
Nunez, Andrea C.;
Pimanda, John E.;
Hawkins, Nicholas J.;
Sieber, Oliver M.;
Bourke, Michael J.;
Hesson, Luke B.;
Ward, Robyn L.

Publication type:

Article