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Single-Cell Transcriptomics of the Human Endocrine Pancreas.
- Published in:
- 2016
- By:
- Publication type:
- journal article
Single-cell RNA-sequencing identifies disease-associated oligodendrocytes in male APP NL-G-F and 5XFAD mice.
- Published in:
- Nature Communications, 2023, n. 1, p. 1, doi. 10.1038/s41467-023-36519-8
- By:
- Publication type:
- Article
Deciphering the temporal heterogeneity of cancer-associated fibroblast subpopulations in breast cancer.
- Published in:
- Journal of Experimental & Clinical Cancer Research (17569966), 2021, v. 40, n. 1, p. 1, doi. 10.1186/s13046-021-01944-4
- By:
- Publication type:
- Article
ATF4 licenses C/EBPβ activity in human mesenchymal stem cells primed for adipogenesis.
- Published in:
- eLife, 2015, p. 1, doi. 10.7554/eLife.06821
- By:
- Publication type:
- Article
CellBIC: bimodality-based top-down clustering of single-cell RNA sequencing data reveals hierarchical structure of the cell type.
- Published in:
- Nucleic Acids Research, 2018, v. 46, n. 21, p. e124, doi. 10.1093/nar/gky698
- By:
- Publication type:
- Article
Shared nucleotide flanks confer transcriptional competency to bZip core motifs.
- Published in:
- Nucleic Acids Research, 2018, v. 46, n. 16, p. 8371, doi. 10.1093/nar/gky681
- By:
- Publication type:
- Article
The CSB chromatin remodeler and CTCF architectural protein cooperate in response to oxidative stress.
- Published in:
- Nucleic Acids Research, 2016, v. 44, n. 5, p. 2125, doi. 10.1093/nar/gkv1219
- By:
- Publication type:
- Article
Comparative annotation of functional regions in the human genome using epigenomic data.
- Published in:
- Nucleic Acids Research, 2013, v. 41, n. 8, p. 4423, doi. 10.1093/nar/gkt143
- By:
- Publication type:
- Article
Global identification of transcriptional regulators of pluripotency and differentiation in embryonic stem cells.
- Published in:
- Nucleic Acids Research, 2012, v. 40, n. 17, p. 8199, doi. 10.1093/nar/gks584
- By:
- Publication type:
- Article
TET2 deficiency cooperates with CBFB‐MYH11 to induce acute myeloid leukaemia and represents an early leukaemogenic event.
- Published in:
- British Journal of Haematology, 2022, v. 197, n. 2, p. 201, doi. 10.1111/bjh.18027
- By:
- Publication type:
- Article
Cell competition in intratumoral and tumor microenvironment interactions.
- Published in:
- EMBO Journal, 2021, v. 40, n. 17, p. 1, doi. 10.15252/embj.2020107271
- By:
- Publication type:
- Article
Nuclear receptor co-repressors are required for the histone-deacetylase activity of HDAC3 in vivo.
- Published in:
- Nature Structural & Molecular Biology, 2013, v. 20, n. 2, p. 182, doi. 10.1038/nsmb.2476
- By:
- Publication type:
- Article
VeTra: a tool for trajectory inference based on RNA velocity.
- Published in:
- Bioinformatics, 2021, v. 37, n. 20, p. 3509, doi. 10.1093/bioinformatics/btab364
- By:
- Publication type:
- Article
Learning-Rate Annealing Methods for Deep Neural Networks.
- Published in:
- Electronics (2079-9292), 2021, v. 10, n. 16, p. 2029, doi. 10.3390/electronics10162029
- By:
- Publication type:
- Article
Transcriptomic Profiling and H3K27me3 Distribution Reveal Both Demethylase-Dependent and Independent Regulation of Developmental Gene Transcription in Cell Differentiation.
- Published in:
- PLoS ONE, 2015, v. 10, n. 8, p. 1, doi. 10.1371/journal.pone.0135276
- By:
- Publication type:
- Article
Zfp423 Binds Autoregulatory Sites in P19 Cell Culture Model.
- Published in:
- PLoS ONE, 2013, v. 8, n. 6, p. 1, doi. 10.1371/journal.pone.0066514
- By:
- Publication type:
- Article
An Integrated Approach to Identifying Cis-Regulatory Modules in the Human Genome.
- Published in:
- PLoS ONE, 2009, v. 4, n. 5, p. 1, doi. 10.1371/journal.pone.0005501
- By:
- Publication type:
- Article
DNA hypermethylation induced by Epstein-Barr virus in the development of Epstein-Barr virus-associated gastric carcinoma.
- Published in:
- Archives of Pharmacal Research, 2017, v. 40, n. 8, p. 894, doi. 10.1007/s12272-017-0939-5
- By:
- Publication type:
- Article
Histone H4 acetylation and the epigenetic reader Brd4 are critical regulators of pluripotency in embryonic stem cells.
- Published in:
- BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2414-y
- By:
- Publication type:
- Article
A multi-omics approach to Epstein-Barr virus immortalization of B-cells reveals EBNA1 chromatin pioneering activities targeting nucleotide metabolism.
- Published in:
- PLoS Pathogens, 2021, v. 17, n. 1, p. 1, doi. 10.1371/journal.ppat.1009208
- By:
- Publication type:
- Article
Comprehensive and unbiased multiparameter high-throughput screening by compaRe finds effective and subtle drug responses in AML models.
- Published in:
- eLife, 2022, p. 1, doi. 10.7554/eLife.73760
- By:
- Publication type:
- Article
PRDM16 represses the type I interferon response in adipocytes to promote mitochondrial and thermogenic programing.
- Published in:
- EMBO Journal, 2017, v. 36, n. 11, p. 1528, doi. 10.15252/embj.201695588
- By:
- Publication type:
- Article
The Transcriptome and Epigenome Reveal Novel Changes in Transcription Regulation During Pancreatic Rat Islet Maturation.
- Published in:
- Endocrinology, 2021, v. 162, n. 11, p. 1, doi. 10.1210/endocr/bqab181
- By:
- Publication type:
- Article
Decreased K<sub>ATP</sub> Channel Activity Contributes to the Low Glucose Threshold for Insulin Secretion of Rat Neonatal Islets.
- Published in:
- Endocrinology, 2021, v. 162, n. 9, p. 1, doi. 10.1210/endocr/bqab121
- By:
- Publication type:
- Article
Transcriptomic and Quantitative Proteomic Profiling Reveals Signaling Pathways Critical for Pancreatic Islet Maturation.
- Published in:
- Endocrinology, 2020, v. 161, n. 12, p. 1, doi. 10.1210/endocr/bqaa187
- By:
- Publication type:
- Article
Inter and transgenerational impact of H3K4 methylation in neuronal homeostasis.
- Published in:
- Life Science Alliance, 2023, v. 6, n. 8, p. 1, doi. 10.26508/lsa.202301970
- By:
- Publication type:
- Article
Proteogenomics analysis reveals specific genomic orientations of distal regulatory regions composed by non-canonical histone variants.
- Published in:
- Epigenetics & Chromatin, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s13072-015-0005-9
- By:
- Publication type:
- Article
CellNeighborEX: deciphering neighbor‐dependent gene expression from spatial transcriptomics data.
- Published in:
- Molecular Systems Biology, 2023, v. 19, n. 11, p. 1, doi. 10.15252/msb.202311670
- By:
- Publication type:
- Article
Vesalius: high‐resolution in silico anatomization of spatial transcriptomic data using image analysis.
- Published in:
- Molecular Systems Biology, 2022, v. 18, n. 9, p. 1, doi. 10.15252/msb.202211080
- By:
- Publication type:
- Article
Targeting PPARγ in the epigenome rescues genetic metabolic defects in mice.
- Published in:
- 2017
- By:
- Publication type:
- journal article
LIM domain-binding 1 maintains the terminally differentiated state of pancreatic β cells.
- Published in:
- 2017
- By:
- Publication type:
- journal article
Upregulation of RhoB via c-Jun N-terminal kinase signaling induces apoptosis of the human gastric carcinoma NUGC-3 cells treated with NSC12618.
- Published in:
- Carcinogenesis, 2011, v. 32, n. 3, p. 254, doi. 10.1093/carcin/bgq244
- By:
- Publication type:
- Article
ChatGPT and large language models in academia: opportunities and challenges.
- Published in:
- BioData Mining, 2023, v. 16, n. 1, p. 1, doi. 10.1186/s13040-023-00339-9
- By:
- Publication type:
- Article
EBNA2 Drives Formation of New Chromosome Binding Sites and Target Genes for B-Cell Master Regulatory Transcription Factors RBP-jκ and EBF1.
- Published in:
- PLoS Pathogens, 2016, v. 12, n. 1, p. 1, doi. 10.1371/journal.ppat.1005339
- By:
- Publication type:
- Article
Human Noxin is an anti-apoptotic protein in response to DNA damage of A549 non-small cell lung carcinoma.
- Published in:
- International Journal of Cancer, 2014, v. 134, n. 11, p. 2595, doi. 10.1002/ijc.28600
- By:
- Publication type:
- Article
Stability of the cancer target DDIAS is regulated by the CHIP/HSP70 pathway in lung cancer cells.
- Published in:
- Cell Death & Disease, 2017, v. 8, n. 1, p. e2554, doi. 10.1038/cddis.2016.488
- By:
- Publication type:
- Article
Histone deacetylase 3 coordinates commensal-bacteria-dependent intestinal homeostasis.
- Published in:
- Nature, 2013, v. 504, n. 7478, p. 153, doi. 10.1038/nature12687
- By:
- Publication type:
- Article
Training HMM structure with genetic algorithm for biological sequence analysis.
- Published in:
- Bioinformatics, 2004, v. 20, n. 18, p. 3613, doi. 10.1093/bioinformatics/bth454
- By:
- Publication type:
- Article
Systemic approaches using single cell transcriptome reveal that C/EBPγ regulates autophagy under amino acid starved condition.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 13, p. 7298, doi. 10.1093/nar/gkac593
- By:
- Publication type:
- Article
TENET: gene network reconstruction using transfer entropy reveals key regulatory factors from single cell transcriptomic data.
- Published in:
- Nucleic Acids Research, 2021, v. 49, n. 1, p. e1, doi. 10.1093/nar/gkaa1014
- By:
- Publication type:
- Article
Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus.
- Published in:
- BMC Bioinformatics, 2018, v. 19, p. 1, doi. 10.1186/s12859-018-2037-1
- By:
- Publication type:
- Article
The Sequence-Specific Transcription Factor c-Jun Targets Cockayne Syndrome Protein B to Regulate Transcription and Chromatin Structure.
- Published in:
- PLoS Genetics, 2014, v. 10, n. 4, p. 1, doi. 10.1371/journal.pgen.1004284
- By:
- Publication type:
- Article
RBPJ, the Major Transcriptional Effector of Notch Signaling, Remains Associated with Chromatin throughout Mitosis, Suggesting a Role in Mitotic Bookmarking.
- Published in:
- PLoS Genetics, 2014, v. 10, n. 3, p. 1, doi. 10.1371/journal.pgen.1004204
- By:
- Publication type:
- Article
NSC126188 induces apoptosis of prostate cancer PC-3 cells through inhibition of Akt membrane translocation, FoxO3a activation, and RhoB transcription.
- Published in:
- Apoptosis, 2014, v. 19, n. 1, p. 179, doi. 10.1007/s10495-013-0905-8
- By:
- Publication type:
- Article
5-hydroxymethylcytosine represses the activity of enhancers in embryonic stem cells: a new epigenetic signature for gene regulation.
- Published in:
- BMC Genomics, 2014, v. 15, n. 1, p. 670, doi. 10.1186/1471-2164-15-670
- By:
- Publication type:
- Article
A wavelet-based method to exploit epigenomic language in the regulatory region.
- Published in:
- Bioinformatics, 2014, v. 30, n. 7, p. 908, doi. 10.1093/bioinformatics/btt467
- By:
- Publication type:
- Article
Modeling promoter grammars with evolving hidden Markov models.
- Published in:
- Bioinformatics, 2008, v. 24, n. 15, p. 1669, doi. 10.1093/bioinformatics/btn254
- By:
- Publication type:
- Article
Pontin arginine methylation by CARM1 is crucial for epigenetic regulation of autophagy.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-20080-9
- By:
- Publication type:
- Article
Comparison of Genetic Profiles and Prognosis of High-Grade Gliomas Using Quantitative and Qualitative MRI Features: A Focus on G3 Gliomas.
- Published in:
- Korean Journal of Radiology, 2021, v. 22, n. 2, p. 233, doi. 10.3348/kjr.2020.0011
- By:
- Publication type:
- Article