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A Simulation Study of the Reliability of Recombination Detection Methods.
- Published in:
- Molecular Biology & Evolution, 2001, v. 18, n. 10, p. 1929, doi. 10.1093/oxfordjournals.molbev.a003733
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- Article
Statistical Evidence for Miscoding Lesions in Ancient DNA Templates.
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- Molecular Biology & Evolution, 2001, v. 18, n. 2, p. 262, doi. 10.1093/oxfordjournals.molbev.a003800
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- Article
Recombination Analysis Using Directed Graphical Models.
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- Molecular Biology & Evolution, 2001, v. 18, n. 1, p. 97, doi. 10.1093/oxfordjournals.molbev.a003725
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- Article
Simulating haplotype blocks in the human genome.
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- Bioinformatics, 2003, v. 19, n. 2, p. 289, doi. 10.1093/bioinformatics/19.2.289
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- Article
Intermediates and Generic Convergence to Equilibria.
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- Bulletin of Mathematical Biology, 2017, v. 79, n. 7, p. 1662, doi. 10.1007/s11538-017-0303-4
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- Article
Lyapunov Functions, Stationary Distributions, and Non-equilibrium Potential for Reaction Networks.
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- Bulletin of Mathematical Biology, 2015, v. 77, n. 9, p. 1744, doi. 10.1007/s11538-015-0102-8
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- Article
An Algebraic Approach to Signaling Cascades with n Layers.
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- Bulletin of Mathematical Biology, 2012, v. 74, n. 1, p. 45, doi. 10.1007/s11538-011-9658-0
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- Article
Convergence Properties of the Degree Distribution of Some Growing Network Models.
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- Bulletin of Mathematical Biology, 2006, v. 68, n. 6, p. 1275, doi. 10.1007/s11538-006-9085-9
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- Article
Finding the positive feedback loops underlying multi-stationarity.
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- BMC Systems Biology, 2015, v. 9, n. 1, p. 1, doi. 10.1186/s12918-015-0164-0
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- Article
A Markov Chain Approach to Randomly Grown Graphs.
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- Journal of Applied Mathematics, 2009, p. 1, doi. 10.1155/2008/190836
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- Article
A Markov Chain Approach to Randomly Grown Graphs.
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- Journal of Applied Mathematics, 2008, p. 1, doi. 10.1155/2008/190836
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- Article
The asymptotic tails of limit distributions of continuous-time Markov chains.
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- Advances in Applied Probability, 2024, v. 56, n. 2, p. 693, doi. 10.1017/apr.2023.42
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- Article
Genome-wide scans using archived neonatal dried blood spotsamples.
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- BMC Genomics, 2009, v. 10, p. 297, doi. 10.1186/1471-2164-10-297
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- Article
Short Tandem Repeats in Human Exons: A Target for Disease Mutations.
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- BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-410
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- Article
A Beta-mixture model for dimensionality reduction, sample classification and analysis.
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- BMC Bioinformatics, 2011, v. 12, n. 1, p. 215, doi. 10.1186/1471-2105-12-215
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- Article
A bimodular mechanism of calcium control in eukaryotes.
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- Nature, 2012, v. 491, n. 7424, p. 468, doi. 10.1038/nature11539
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- Article
Evaluation of population structure inferred by principal component analysis or the admixture model.
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- Genetics, 2023, v. 225, n. 2, p. 1, doi. 10.1093/genetics/iyad157
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- Article
Estimation of site frequency spectra from low-coverage sequencing data using stochastic EM reduces overfitting, runtime, and memory usage.
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- Genetics, 2022, v. 222, n. 4, p. 1, doi. 10.1093/genetics/iyac148
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- Article
Critical Parameters for Singular Perturbation Reductions of Chemical Reaction Networks.
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- Journal of Nonlinear Science, 2022, v. 32, n. 6, p. 1, doi. 10.1007/s00332-022-09843-4
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- Article
Powerful Inference with the D-Statistic on Low-Coverage Whole-Genome Data.
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- G3: Genes | Genomes | Genetics, 2018, v. 8, n. 2, p. 551, doi. 10.1534/g3.117.300192
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- Article
Identification of Hidden Population Structure in Time-Scaled Phylogenies.
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- Systematic Biology, 2020, v. 69, n. 5, p. 884, doi. 10.1093/sysbio/syaa009
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- Article
Identification of endogenous retroviral reading frames in the human genome.
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- Retrovirology, 2004, v. 1, p. 32, doi. 10.1186/1742-4690-1-32
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- Article
On the sum of chemical reactions.
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- European Journal of Applied Mathematics, 2023, v. 34, n. 2, p. 303, doi. 10.1017/S0956792522000146
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- Article
Estimation of tumor heterogeneity using CGH array data.
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- BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-12
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- Article
Ab initio identification of human microRNAs based on structure motifs.
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- BMC Bioinformatics, 2007, v. 8, p. 478, doi. 10.1186/1471-2105-8-478
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- Article
A Hidden Markov Model to estimate population mixture and allelic copy-numbers in cancers using Affymetrix SNP arrays.
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- BMC Bioinformatics, 2007, v. 8, p. 434, doi. 10.1186/1471-2105-8-434
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- Article
Phosphorelays Provide Tunable Signal Processing Capabilities for the Cell.
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- PLoS Computational Biology, 2013, v. 9, n. 11, p. 1, doi. 10.1371/journal.pcbi.1003322
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- Article
Using Likelihood-Free Inference to Compare Evolutionary Dynamics of the Protein Networks of H. pylori and P. falciparum.
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- PLoS Computational Biology, 2007, v. 3, n. 11, p. e230, doi. 10.1371/journal.pcbi.0030230
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- Article
Fatgraph models of proteins.
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- Communications on Pure & Applied Mathematics, 2010, v. 63, n. 10, p. 1249, doi. 10.1002/cpa.20340
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- Article
Large Scale Identification and Categorization of Protein Sequences Using Structured Logistic Regression.
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- PLoS ONE, 2014, v. 9, n. 1, p. 1, doi. 10.1371/journal.pone.0085139
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- Article
An Algebro-Topological Description of Protein Domain Structur.
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- PLoS ONE, 2011, v. 6, n. 5, p. 1, doi. 10.1371/journal.pone.0019670
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- Article
Germline Mutation in RNASEL Predicts Increased Risk of Head and Neck, Uterine Cervix and Breast Cancer.
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- PLoS ONE, 2008, v. 3, n. 6, p. 1, doi. 10.1371/journal.pone.0002492
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- Article
Monitoring endangered freshwater biodiversity using environmental DNA.
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- Molecular Ecology, 2012, v. 21, n. 11, p. 2565, doi. 10.1111/j.1365-294X.2011.05418.x
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- Article
Estimating admixture pedigrees of recent hybrids without a contiguous reference genome.
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- Molecular Ecology Resources, 2023, v. 23, n. 7, p. 1604, doi. 10.1111/1755-0998.13830
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- Article
Tumor heterogeneity in neoplasms of breast, colon, and skin.
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- BMC Research Notes, 2010, v. 3, p. 321, doi. 10.1186/1756-0500-3-321
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- Article
The association between genetic variants in hMLH1 and hMSH2 and the development of sporadic colorectal cancer in the Danish population.
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- BMC Medical Genetics, 2008, v. 9, p. 1, doi. 10.1186/1471-2350-9-52
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- Article
Quality assessment of DNA derived from up to 30 years old formalin fixed paraffin embedded (FFPE) tissue for PCR-based methylation analysis using SMART-MSP and MS-HRM.
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- 2009
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- Publication type:
- journal article
Chromosomal imbalance in the progression of high-risk non-muscle invasive bladder cancer.
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- BMC Cancer, 2009, v. 9, p. 1, doi. 10.1186/1471-2407-9-149
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- Article
Bioinformatic identification of FGF, p38-MAPK, and calcium signalling pathways associated with carcinoma in situ in the urinary bladder.
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- 2008
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- Publication type:
- journal article
Bioinformatic identification of FGF, p38-MAPK, and calcium signalling pathways associated with carcinoma in situ in the urinary bladder.
- Published in:
- BMC Cancer, 2008, v. 8, p. 1, doi. 10.1186/1471-2407-8-37
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- Article
Intermediates, catalysts, persistence, and boundary steady states.
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- Journal of Mathematical Biology, 2017, v. 74, n. 4, p. 887, doi. 10.1007/s00285-016-1046-9
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- Article
Graphical reduction of reaction networks by linear elimination of species.
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- Journal of Mathematical Biology, 2017, v. 74, n. 1/2, p. 195, doi. 10.1007/s00285-016-1028-y
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- Article
Variable elimination in post-translational modification reaction networks with mass-action kinetics.
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- Journal of Mathematical Biology, 2013, v. 66, n. 1/2, p. 281, doi. 10.1007/s00285-012-0510-4
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- Article
Consistency of estimators of population scaled parameters using composite likelihood.
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- Journal of Mathematical Biology, 2006, v. 53, n. 5, p. 821, doi. 10.1007/s00285-006-0031-0
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- Article
A computational method to preclude multistationarity in networks of interacting species.
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- Bioinformatics, 2013, v. 29, n. 18, p. 2327, doi. 10.1093/bioinformatics/btt400
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- Article
Rseg—an R package to optimize segmentation of SNP array data.
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- Bioinformatics, 2011, v. 27, n. 3, p. 419, doi. 10.1093/bioinformatics/btq668
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- Article
SNPTools: a software tool for visualization and analysis of microarray data.
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- Bioinformatics, 2007, v. 23, n. 12, p. 1550, doi. 10.1093/bioinformatics/btm122
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- Article
Recharacterization of ancient DNA miscoding lesions: insights in the era of sequencing-by-synthesis.
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- Nucleic Acids Research, 2007, v. 35, n. 1, p. 1
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- Article
Genotyping and annotation of Affymetrix SNP arrays.
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- Nucleic Acids Research, 2006, v. 34, n. 14, p. e100, doi. 10.1093/nar/gkl475
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- Article
Importance Sampling for the Infinite Sites Model.
- Published in:
- Statistical Applications in Genetics & Molecular Biology, 2008, v. 7, n. 1, p. 1, doi. 10.2202/1544-6115.1400
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- Article