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Ultra-short cell-free DNA fragments enhance cancer early detection in a multi-analyte blood test combining mutation, protein and fragmentomics.
Published in:
Clinical Chemistry & Laboratory Medicine, 2024, v. 62, n. 1, p. 168, doi. 10.1515/cclm-2023-0541
By:
- Wang, Fenfen;
- Li, Xinxing;
- Li, Mengxing;
- Liu, Wendi;
- Lu, Lingjia;
- Li, Yang;
- Chen, Xiaojing;
- Yang, Siqi;
- Liu, Tao;
- Cheng, Wen;
- Weng, Li;
- Wang, Hongyan;
- Lu, Dongsheng;
- Yao, Qianqian;
- Wang, Yingyu;
- Wu, Johnny;
- Wittkop, Tobias;
- Faham, Malek;
- Zhou, Huabang;
- Hu, Heping
Publication type:
Article
Density parameter estimation for finding clusters of homologous proteins—tracing actinobacterial pathogenicity lifestyles.
Published in:
Bioinformatics, 2013, v. 29, n. 2, p. 215, doi. 10.1093/bioinformatics/bts653
By:
- Röttger, Richard;
- Kalaghatgi, Prabhav;
- Sun, Peng;
- Soares, Siomar de Castro;
- Azevedo, Vasco;
- Wittkop, Tobias;
- Baumbach, Jan
Publication type:
Article
STOP using just GO: a multi-ontology hypothesis generation tool for high throughput experimentation.
Published in:
BMC Bioinformatics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2105-14-53
By:
- Wittkop, Tobias;
- TerAvest, Emily;
- Evani, Uday S.;
- Mathew Fleisch, K.;
- Berman, Ari E.;
- Powell, Corey;
- Shah, Nigam H.;
- Mooney, Sean D.
Publication type:
Article
A large-scale evaluation of computational protein function prediction.
Published in:
Nature Methods, 2013, v. 10, n. 3, p. 221, doi. 10.1038/nmeth.2340
By:
- Radivojac, Predrag;
- Clark, Wyatt T;
- Oron, Tal Ronnen;
- Schnoes, Alexandra M;
- Wittkop, Tobias;
- Sokolov, Artem;
- Graim, Kiley;
- Funk, Christopher;
- Verspoor, Karin;
- Ben-Hur, Asa;
- Pandey, Gaurav;
- Yunes, Jeffrey M;
- Talwalkar, Ameet S;
- Repo, Susanna;
- Souza, Michael L;
- Piovesan, Damiano;
- Casadio, Rita;
- Wang, Zheng;
- Cheng, Jianlin;
- Fang, Hai
Publication type:
Article
Partitioning biological data with transitivity clustering.
Published in:
2010
By:
- Wittkop, Tobias;
- Emig, Dorothea;
- Lange, Sita;
- Rahmann, Sven;
- Albrecht, Mario;
- Morris, John H.;
- Böcker, Sebastian;
- Stoye, Jens;
- Baumbach, Jan
Publication type:
Letter
INTRODUCTION:: ADVANCES IN COMPUTATIONAL SYSTEMS BIOINFORMATICS.
Published in:
Journal of Bioinformatics & Computational Biology, 2011, v. 9, n. 2, p. v, doi. 10.1142/S0219720011005537
By:
- WITTKOP, TOBIAS;
- MOONEY, SEAN D.
Publication type:
Article
DEFOG: discrete enrichment of functionally organized genes.
Published in:
Integrative Biology, 2012, v. 4, n. 7, p. 795, doi. 10.1039/c2ib00136e
By:
- Wittkop, Tobias;
- Berman, Ari E.;
- Fleisch, K. Mathew;
- Mooney, Sean D.
Publication type:
Article
Ultra-sensitive molecular residual disease detection through whole genome sequencing with single-read error correction.
Published in:
EMBO Molecular Medicine, 2024, v. 16, n. 9, p. 2188, doi. 10.1038/s44321-024-00115-0
By:
- Li, Xinxing;
- Liu, Tao;
- Bacchiocchi, Antonella;
- Li, Mengxing;
- Cheng, Wen;
- Wittkop, Tobias;
- Mendez, Fernando L;
- Wang, Yingyu;
- Tang, Paul;
- Yao, Qianqian;
- Bosenberg, Marcus W;
- Sznol, Mario;
- Yan, Qin;
- Faham, Malek;
- Weng, Li;
- Halaban, Ruth;
- Jin, Hai;
- Hu, Zhiqian
Publication type:
Article
Multiplex Identification of Antigen-Specific T Cell Receptors Using a Combination of Immune Assays and Immune Receptor Sequencing.
Published in:
PLoS ONE, 2015, v. 10, n. 10, p. 1, doi. 10.1371/journal.pone.0141561
By:
- Klinger, Mark;
- Pepin, Francois;
- Wilkins, Jen;
- Asbury, Thomas;
- Wittkop, Tobias;
- Zheng, Jianbiao;
- Moorhead, Martin;
- Faham, Malek
Publication type:
Article

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