Works by Winkler, Anika

Results: 25

Individual- and Species-Specific Skin Microbiomes in Three Different Estrildid Finch Species Revealed by 16S Amplicon Sequencing.

Published in:

Microbial Ecology, 2018, v. 76, n. 2, p. 518, doi. 10.1007/s00248-017-1130-8

By:

Engel, Kathrin;
Sauer, Jan;
Jünemann, Sebastian;
Winkler, Anika;
Wibberg, Daniel;
Kalinowski, Jörn;
Tauch, Andreas;
Caspers, Barbara A.

Publication type:

Article

Complete genome sequence of the actinomycete Actinoalloteichus hymeniacidonis type strain HPA 177<sup>T</sup> isolated from a marine sponge.

Published in:

Standards in Genomic Sciences, 2016, v. 11, p. 1, doi. 10.1186/s40793-016-0213-3

By:

Schaffert, Lena;
Albersmeier, Andreas;
Winkler, Anika;
Kalinowski, Jörn;
Zotchev, Sergey B.;
Rückert, Christian

Publication type:

Article

Integration event induced changes in recombinant protein productivity in Pichia pastoris discovered by whole genome sequencing and derived vector optimization.

Published in:

Microbial Cell Factories, 2016, v. 15, p. 1, doi. 10.1186/s12934-016-0486-7

By:

Schwarzhans, Jan-Philipp;
Wibberg, Daniel;
Winkler, Anika;
Luttermann, Tobias;
Kalinowski, Jörn;
Friehs, Karl

Publication type:

Article

Oil type and temperature dependent biodegradation dynamics - Combining chemical and microbial community data through multivariate analysis.

Published in:

BMC Microbiology, 2018, v. 18, n. 1, p. N.PAG, doi. 10.1186/s12866-018-1221-9

By:

Ribicic, Deni;
McFarlin, Kelly Marie;
Netzer, Roman;
Brakstad, Odd Gunnar;
Winkler, Anika;
Throne-Holst, Mimmi;
Størseth, Trond Røvik

Publication type:

Article

Ψ-Footprinting approach for the identification of protein synthesis inhibitor producers.

Published in:

NAR Genomics & Bioinformatics, 2022, v. 4, n. 3, p. 1, doi. 10.1093/nargab/lqac055

By:

Handel, Franziska;
Kulik, Andreas;
Wex, Katharina W;
Berscheid, Anne;
Saur, Julian S;
Winkler, Anika;
Wibberg, Daniel;
Kalinowski, Jörn;
Brötz-Oesterhelt, Heike;
Mast, Yvonne

Publication type:

Article

Phytoplankton consortia as a blueprint for mutually beneficial eukaryote-bacteria ecosystems based on the biocoenosis of Botryococcus consortia.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-81082-1

By:

Blifernez-Klassen, Olga;
Klassen, Viktor;
Wibberg, Daniel;
Cebeci, Enis;
Henke, Christian;
Rückert, Christian;
Chaudhari, Swapnil;
Rupp, Oliver;
Blom, Jochen;
Winkler, Anika;
Al-Dilaimi, Arwa;
Goesmann, Alexander;
Sczyrba, Alexander;
Kalinowski, Jörn;
Bräutigam, Andrea;
Kruse, Olaf

Publication type:

Article

Isolation and genome sequencing of four Arctic marine Psychrobacter strains exhibiting multicopper oxidase activity.

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2445-4

By:

Moghadam, Morteza Shojaei;
Albersmeier, Andreas;
Winkler, Anika;
Cimmino, Lorenzo;
Rise, Kjersti;
Hohmann-Marriott, Martin Frank;
Kalinowski, Jörn;
Rückert, Christian;
Wentzel, Alexander;
Lale, Rahmi

Publication type:

Article

Identification of a novel mycovirus isolated from Rhizoctonia solani (AG 2-2 IV) provides further information about genome plasticity within the order Tymovirales.

Published in:

Archives of Virology, 2017, v. 162, n. 2, p. 555, doi. 10.1007/s00705-016-3085-3

By:

Bartholomäus, Anika;
Wibberg, Daniel;
Winkler, Anika;
Pühler, Alfred;
Schlüter, Andreas;
Varrelmann, Mark

Publication type:

Article

Deep Sequencing Analysis Reveals the Mycoviral Diversity of the Virome of an Avirulent Isolate of Rhizoctonia solani AG-2-2 IV.

Published in:

PLoS ONE, 2016, v. 11, n. 11, p. 1, doi. 10.1371/journal.pone.0165965

By:

Bartholomäus, Anika;
Wibberg, Daniel;
Winkler, Anika;
Pühler, Alfred;
Schlüter, Andreas;
Varrelmann, Mark

Publication type:

Article

Deciphering the Transcriptional Response Mediated by the Redox-Sensing System HbpS-SenS-SenR from Streptomycetes.

Published in:

PLoS ONE, 2016, v. 11, n. 8, p. 1, doi. 10.1371/journal.pone.0159873

By:

Busche, Tobias;
Winkler, Anika;
Wedderhoff, Ina;
Rückert, Christian;
Kalinowski, Jörn;
Ortiz de Orué Lucana, Darío

Publication type:

Article

Comparative genomics reveals phylogenetic distribution patterns of secondary metabolites in <italic>Amycolatopsis</italic> species.

Published in:

BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-4809-4

By:

Adamek, Martina;
Alanjary, Mohammad;
Sales-Ortells, Helena;
Goodfellow, Michael;
Bull, Alan T.;
Winkler, Anika;
Wibberg, Daniel;
Kalinowski, Jörn;
Ziemert, Nadine

Publication type:

Article

Complete mitochondrial genome of the scleractinian coral Porites rus.

Published in:

Mitochondrial DNA. Part A, 2016, v. 27, n. 5, p. 3695, doi. 10.3109/19401736.2015.1079860

By:

Celis, Juan Sebastián;
Wibberg, Daniel;
Winkler, Anika;
Wilke, Thomas;
Kalinowski, Joern

Publication type:

Article

A Mitochondrial Autonomously Replicating Sequence from Pichia pastoris for Uniform High Level Recombinant Protein Production.

Published in:

Frontiers in Microbiology, 2017, v. 8, p. 1, doi. 10.3389/fmicb.2017.00780

By:

Schwarzhans, Jan-Philipp;
Luttermann, Tobias;
Wibberg, Daniel;
Winkler, Anika;
Hübner, Wolfgang;
Huser, Thomas;
Kalinowski, Jörn;
Friehs, Karl

Publication type:

Article

The Rhizoctonia solani AG1-IB (isolate 7/3/14) transcriptome during interaction with the host plant lettuce (Lactuca sativa L.).

Published in:

PLoS ONE, 2017, v. 12, n. 5, p. 1, doi. 10.1371/journal.pone.0177278

By:

Verwaaijen, Bart;
Wibberg, Daniel;
Kröber, Magdalena;
Winkler, Anika;
Zrenner, Rita;
Bednarz, Hanna;
Niehaus, Karsten;
Grosch, Rita;
Pühler, Alfred;
Schlüter, Andreas

Publication type:

Article

A Regulator Based "Semi-Targeted" Approach to Activate Silent Biosynthetic Gene Clusters.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 14, p. 7567, doi. 10.3390/ijms22147567

By:

Mingyar, Erik;
Mühling, Lucas;
Kulik, Andreas;
Winkler, Anika;
Wibberg, Daniel;
Kalinowski, Jörn;
Blin, Kai;
Weber, Tilmann;
Wohlleben, Wolfgang;
Stegmann, Evi

Publication type:

Article

Patterning of protein‐based materials.

Published in:

Biopolymers, 2021, v. 112, n. 2, p. 1, doi. 10.1002/bip.23412

By:

Humenik, Martin;
Winkler, Anika;
Scheibel, Thomas

Publication type:

Article

Non-canonical integration events in Pichia pastoris encountered during standard transformation analysed with genome sequencing.

Published in:

Scientific Reports, 2016, p. 38952, doi. 10.1038/srep38952

By:

Schwarzhans, Jan-Philipp;
Wibberg, Daniel;
Winkler, Anika;
Luttermann, Tobias;
Kalinowski, Jörn;
Friehs, Karl

Publication type:

Article

Binning enables efficient host genome reconstruction in cnidarian holobionts.

Published in:

GigaScience, 2018, v. 7, n. 7, p. N.PAG, doi. 10.1093/gigascience/giy075

By:

Celis, Juan Sebastián;
Wibberg, Daniel;
Ramírez-Portilla, Catalina;
Rupp, Oliver;
Sczyrba, Alexander;
Winkler, Anika;
Kalinowski, Jörn;
Wilke, Thomas

Publication type:

Article

Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant.

Published in:

GigaScience, 2015, v. 4, n. 1, p. 1, doi. 10.1186/s13742-015-0073-6

By:

Bremges, Andreas;
Maus, Irena;
Belmann, Peter;
Eikmeyer, Felix;
Winkler, Anika;
Albersmeier, Andreas;
Pühler, Alfred;
Schlüter, Andreas;
Sczyrba, Alexander

Publication type:

Article

Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant.

Published in:

GigaScience, 2015, v. 4, n. 31-34, p. 1, doi. 10.1186/s13742-015-0073-6

By:

Bremges, Andreas;
Maus, Irena;
Belmann, Peter;
Eikmeyer, Felix;
Winkler, Anika;
Albersmeier, Andreas;
Pühler, Alfred;
Schlüter, Andreas;
Sczyrba, Alexander

Publication type:

Article

Biodegradation of dispersed oil in natural seawaters from Western Greenland and a Norwegian fjord.

Published in:

Polar Biology, 2018, v. 41, n. 12, p. 2435, doi. 10.1007/s00300-018-2380-8

By:

Brakstad, Odd G.;
Davies, Emlyn J.;
Ribicic, Deni;
Winkler, Anika;
Brönner, Ute;
Netzer, Roman

Publication type:

Article

Genetic Potential of the Biocontrol Agent Pseudomonas brassicacearum (Formerly P. trivialis) 3Re2-7 Unraveled by Genome Sequencing and Mining, Comparative Genomics and Transcriptomics.

Published in:

Genes, 2019, v. 10, n. 8, p. 601, doi. 10.3390/genes10080601

By:

Nelkner, Johanna;
Torres Tejerizo, Gonzalo;
Hassa, Julia;
Lin, Timo Wentong;
Witte, Julian;
Verwaaijen, Bart;
Winkler, Anika;
Bunk, Boyke;
Spröer, Cathrin;
Overmann, Jörg;
Grosch, Rita;
Pühler, Alfred;
Schlüter, Andreas

Publication type:

Article

Time-resolved transcriptome analysis and lipid pathway reconstruction of the oleaginous green microalga Monoraphidium neglectum reveal a model for triacylglycerol and lipid hyperaccumulation.

Published in:

Biotechnology for Biofuels, 2017, v. 10, p. 1, doi. 10.1186/s13068-017-0882-1

By:

Jaeger, Daniel;
Winkler, Anika;
Mussgnug, Jan H.;
Kalinowski, Jörn;
Goesmann, Alexander;
Kruse, Olaf

Publication type:

Article

Highly efficient methane generation from untreated microalgae biomass.

Published in:

Biotechnology for Biofuels, 2017, v. 10, p. 1, doi. 10.1186/s13068-017-0871-4

By:

Klassen, Viktor;
Blifernez-Klassen, Olga;
Wibberg, Daniel;
Winkler, Anika;
Kalinowski, Jörn;
Posten, Clemens;
Kruse, Olaf

Publication type:

Article

Differential transcriptomic analysis reveals hidden light response in <italic>Streptomyces lividans</italic>.

Published in:

Biotechnology Progress, 2018, v. 34, n. 1, p. 287, doi. 10.1002/btpr.2566

By:

Koepff, Joachim;
Morschett, Holger;
Busche, Tobias;
Winkler, Anika;
Kalinowski, Jörn;
Wiechert, Wolfgang;
Oldiges, Marco

Publication type:

Article